Avp (arginine vasopressin) - Rat Genome Database

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Gene: Avp (arginine vasopressin) Heterocephalus glaber
Analyze
Symbol: Avp
Name: arginine vasopressin
RGD ID: 18916444
Description: ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); neuropeptide hormone activity (ortholog); protein kinase activity (ortholog); INVOLVED IN ERK1 and ERK2 cascade (ortholog); grooming behavior (ortholog); locomotory behavior (ortholog); PARTICIPATES IN vasopressin signaling pathway; vasopressin signaling pathway via receptor type 1; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH acute kidney failure (ortholog); amnestic disorder (ortholog); Angina Pectoris (ortholog); FOUND IN dendrite (ortholog); extracellular space (ortholog); neuronal dense core vesicle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: vasopressin-neurophysin 2-copeptin; vasopressin-neurophysin 2-copeptin preproprotein
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247414,208,329 - 4,210,071 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247414,208,305 - 4,210,097 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Avp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247414,208,329 - 4,210,071 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247414,208,305 - 4,210,097 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
AVP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38203,082,556 - 3,084,724 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl203,082,556 - 3,084,724 (-)EnsemblGRCh38hg38GRCh38
GRCh37203,063,202 - 3,065,370 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36203,011,202 - 3,013,370 (-)NCBINCBI36Build 36hg18NCBI36
Build 34203,011,202 - 3,013,370NCBI
Celera203,125,188 - 3,127,356 (-)NCBICelera
Cytogenetic Map20p13NCBI
HuRef203,011,450 - 3,013,197 (-)NCBIHuRef
CHM1_1203,057,749 - 3,065,399 (-)NCBICHM1_1
T2T-CHM13v2.0203,113,454 - 3,115,623 (-)NCBIT2T-CHM13v2.0
Avp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392130,422,540 - 130,424,508 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2130,422,540 - 130,424,474 (-)EnsemblGRCm39 Ensembl
GRCm382130,580,620 - 130,582,588 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2130,580,620 - 130,582,554 (-)EnsemblGRCm38mm10GRCm38
MGSCv372130,406,413 - 130,408,277 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362130,272,118 - 130,273,982 (-)NCBIMGSCv36mm8
Celera2131,805,101 - 131,806,965 (-)NCBICelera
Cytogenetic Map2F1NCBI
cM Map263.24NCBI
Avp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83138,246,544 - 138,248,522 (-)NCBIGRCr8
mRatBN7.23117,793,447 - 117,805,091 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3117,793,457 - 117,795,425 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3121,687,900 - 121,689,880 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03130,285,159 - 130,287,139 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03127,944,031 - 127,946,011 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03123,117,482 - 123,119,460 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3123,117,492 - 123,119,460 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03129,615,610 - 129,627,147 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43118,205,007 - 118,206,985 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13118,110,580 - 118,112,558 (-)NCBI
Celera3116,604,316 - 116,606,294 (-)NCBICelera
Cytogenetic Map3q36NCBI
AVP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2214,050,125 - 4,055,214 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1204,046,950 - 4,052,045 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0203,169,094 - 3,172,900 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1202,934,408 - 2,937,077 (-)NCBIpanpan1.1PanPan1.1panPan2
AVP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12418,183,057 - 18,184,827 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2418,183,057 - 18,184,883 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2418,011,435 - 18,013,192 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02418,601,989 - 18,603,744 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2418,601,989 - 18,603,744 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12418,195,309 - 18,197,064 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02418,307,955 - 18,309,707 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02418,635,781 - 18,637,537 (+)NCBIUU_Cfam_GSD_1.0
AVP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1732,581,234 - 32,583,185 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11732,581,234 - 32,583,145 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21736,950,915 - 36,952,826 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AVP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1233,761,066 - 33,764,608 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl233,761,140 - 33,763,172 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607110,750,976 - 10,753,915 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000022485   ⟹   ENSHGLP00000022274
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247414,208,329 - 4,210,071 (-)Ensembl
RefSeq Acc Id: XM_004840695   ⟹   XP_004840752
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247414,208,305 - 4,210,097 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004840752 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000022274
  ENSHGLP00100020660
GenBank Protein JAO01639 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_004840752   ⟸   XM_004840695
- UniProtKB: A0A0P6K6T8 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000022274   ⟸   ENSHGLT00000022485


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000015880 Ensembl, ENTREZGENE
  ENSHGLG00100046270 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000022485 ENTREZGENE
  ENSHGLT00100020880 UniProtKB/TrEMBL
Gene3D-CATH 2.60.9.10 UniProtKB/TrEMBL
InterPro Neurhyp_horm UniProtKB/TrEMBL
  Neurhyp_horm_dom_sf UniProtKB/TrEMBL
  Neurohypophysial_hormone_CS UniProtKB/TrEMBL
KEGG Report hgl:101717720 UniProtKB/TrEMBL
NCBI Gene Avp ENTREZGENE
PANTHER PTHR11681 UniProtKB/TrEMBL
  VASOPRESSIN-NEUROPHYSIN 2-COPEPTIN UniProtKB/TrEMBL
Pfam Hormone_4 UniProtKB/TrEMBL
  Hormone_5 UniProtKB/TrEMBL
PIRSF Nonapeptide_hormone_precursor UniProtKB/TrEMBL
PRINTS NEUROPHYSIN UniProtKB/TrEMBL
PROSITE NEUROHYPOPHYS_HORM UniProtKB/TrEMBL
SMART SM00003 UniProtKB/TrEMBL
Superfamily-SCOP SSF49606 UniProtKB/TrEMBL
UniProt A0A0P6K6T8 ENTREZGENE, UniProtKB/TrEMBL