Zfp69 (ZFP69 zinc finger protein) - Rat Genome Database

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Gene: Zfp69 (ZFP69 zinc finger protein) Heterocephalus glaber
Analyze
Symbol: Zfp69
Name: ZFP69 zinc finger protein
RGD ID: 18916279
Description: ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity (inferred); metal ion binding (inferred); INVOLVED IN regulation of lipid metabolic process (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease dominant intermediate C (ortholog); genetic disease (ortholog); FOUND IN nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Zinc finger protein 642; zinc finger protein ZFP69
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476422,917,668 - 22,938,916 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476422,917,760 - 22,938,441 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:30032202  


Genomics

Comparative Map Data
Zfp69
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476422,917,668 - 22,938,916 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476422,917,760 - 22,938,441 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
ZFP69
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38140,477,290 - 40,496,343 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl140,477,290 - 40,496,343 (+)EnsemblGRCh38hg38GRCh38
GRCh37140,942,962 - 40,962,015 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36140,715,889 - 40,734,602 (+)NCBINCBI36Build 36hg18NCBI36
Build 34140,612,394 - 40,631,053NCBI
Celera139,225,688 - 39,244,405 (+)NCBICelera
Cytogenetic Map1p34.2NCBI
HuRef139,061,578 - 39,080,071 (+)NCBIHuRef
CHM1_1141,059,282 - 41,077,991 (+)NCBICHM1_1
T2T-CHM13v2.0140,346,903 - 40,365,936 (+)NCBIT2T-CHM13v2.0
Zfp69
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394120,786,201 - 120,808,898 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4120,787,334 - 120,808,896 (-)EnsemblGRCm39 Ensembl
GRCm384120,930,133 - 120,951,701 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4120,930,137 - 120,951,699 (-)EnsemblGRCm38mm10GRCm38
MGSCv374120,602,742 - 120,624,306 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364120,427,772 - 120,447,053 (-)NCBIMGSCv36mm8
Celera4119,648,302 - 119,662,610 (-)NCBICelera
Cytogenetic Map4D2.2NCBI
cM Map456.66NCBI
Zfp69
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85139,783,735 - 139,801,650 (-)NCBIGRCr8
mRatBN7.25134,502,002 - 134,516,428 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5134,501,998 - 134,514,358 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.05139,856,457 - 139,871,896 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5139,857,363 - 139,864,393 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.05143,649,668 - 143,665,111 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45141,515,569 - 141,527,468 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera5133,055,493 - 133,070,887 (-)NCBICelera
Cytogenetic Map5q36NCBI
ZFP69
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21186,325,753 - 186,343,969 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11185,465,431 - 185,485,327 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0139,767,402 - 39,786,090 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1141,089,353 - 41,108,690 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl141,089,353 - 41,108,690 (+)Ensemblpanpan1.1panPan2
ZFP69B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1152,510,760 - 2,526,715 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl152,512,402 - 2,547,699 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha152,768,847 - 2,785,733 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0152,599,668 - 2,616,812 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl152,599,668 - 2,637,689 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1152,505,462 - 2,522,341 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0152,565,397 - 2,582,270 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0152,581,716 - 2,598,591 (-)NCBIUU_Cfam_GSD_1.0
LOC110599049
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505856,396,896 - 56,402,156 (+)NCBIHiC_Itri_2
SpeTri2.0NW_00493647422,221,687 - 22,237,660 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZFP69
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12092,424,669 - 92,442,312 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2092,424,954 - 92,441,849 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603324,436,133 - 24,455,485 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


RefSeq Acc Id: ENSHGLT00000023692   ⟹   ENSHGLP00000023475
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462476422,917,668 - 22,938,916 (+)Ensembl
RefSeq Acc Id: XM_004851054   ⟹   XP_004851111
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462476422,917,760 - 22,938,441 (+)NCBI
RefSeq Acc Id: XM_004851055   ⟹   XP_004851112
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462476422,917,760 - 22,938,441 (+)NCBI
RefSeq Acc Id: XM_004851056   ⟹   XP_004851113
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462476422,917,763 - 22,938,200 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004851111 (Get FASTA)   NCBI Sequence Viewer  
  XP_004851112 (Get FASTA)   NCBI Sequence Viewer  
  XP_004851113 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB18904 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000023475
RefSeq Acc Id: XP_004851111   ⟸   XM_004851054
- Peptide Label: isoform X1
- UniProtKB: G5CBJ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004851112   ⟸   XM_004851055
- Peptide Label: isoform X1
- UniProtKB: G5CBJ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004851113   ⟸   XM_004851056
- Peptide Label: isoform X2
RefSeq Acc Id: ENSHGLP00000023475   ⟸   ENSHGLT00000023692


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000016741 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000023692 ENTREZGENE
Gene3D-CATH 6.10.140.140 UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/TrEMBL
InterPro KRAB UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
KEGG Report hgl:101721720 UniProtKB/TrEMBL
NCBI Gene Zfp69 ENTREZGENE
PANTHER ZINC FINGER PROTEIN UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 845 UniProtKB/TrEMBL
Pfam KRAB UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/TrEMBL
PROSITE KRAB UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART KRAB UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF109640 UniProtKB/TrEMBL
  SSF57667 UniProtKB/TrEMBL
UniProt G5CBJ3 ENTREZGENE, UniProtKB/TrEMBL