Dram1 (DNA damage regulated autophagy modulator 1) - Rat Genome Database

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Gene: Dram1 (DNA damage regulated autophagy modulator 1) Heterocephalus glaber
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Symbol: Dram1
Name: DNA damage regulated autophagy modulator 1
RGD ID: 18916235
Description: INVOLVED IN regulation of autophagy (inferred); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: DNA damage-regulated autophagy modulator protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247506,288,721 - 6,305,112 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (ISO)
lysosome  (IEA)
membrane  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Dram1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247506,288,721 - 6,305,112 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
DRAM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812101,877,580 - 101,923,612 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12101,877,580 - 102,012,130 (+)EnsemblGRCh38hg38GRCh38
GRCh3712102,271,358 - 102,317,390 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3612100,795,236 - 100,841,532 (+)NCBINCBI36Build 36hg18NCBI36
Celera12101,935,130 - 101,981,421 (+)NCBICelera
Cytogenetic Map12q23.2NCBI
HuRef1299,330,839 - 99,376,998 (+)NCBIHuRef
CHM1_112102,237,780 - 102,284,071 (+)NCBICHM1_1
T2T-CHM13v2.012101,838,785 - 101,884,733 (+)NCBIT2T-CHM13v2.0
Dram1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391088,158,663 - 88,200,218 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1088,158,666 - 88,214,942 (-)EnsemblGRCm39 Ensembl
GRCm381088,322,801 - 88,364,359 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1088,322,804 - 88,379,080 (-)EnsemblGRCm38mm10GRCm38
MGSCv371087,785,549 - 87,819,820 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361087,752,603 - 87,786,874 (-)NCBIMGSCv36mm8
Celera1090,300,347 - 90,334,626 (-)NCBICelera
Cytogenetic Map10C1NCBI
cM Map1043.81NCBI
Dram1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8724,630,233 - 24,665,270 (-)NCBIGRCr8
mRatBN7.2722,742,794 - 22,776,888 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl722,742,849 - 22,776,765 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx724,737,427 - 24,771,402 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0726,900,112 - 26,934,103 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0726,677,146 - 26,711,152 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0728,898,647 - 28,932,641 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl728,898,649 - 28,932,641 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0729,007,043 - 29,040,879 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4725,024,991 - 25,060,230 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera719,903,485 - 19,937,259 (-)NCBICelera
Cytogenetic Map7q13NCBI
Dram1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540537,153,561 - 37,171,309 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540537,153,847 - 37,170,007 (+)NCBIChiLan1.0ChiLan1.0
DRAM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210109,946,880 - 109,996,882 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112109,947,242 - 109,991,032 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01299,464,540 - 99,509,793 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.112102,862,707 - 102,907,385 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12102,862,707 - 102,907,385 (+)Ensemblpanpan1.1panPan2
DRAM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11540,759,739 - 40,794,666 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1540,758,810 - 40,792,906 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1541,128,022 - 41,172,892 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01541,413,996 - 41,458,979 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1541,413,486 - 41,447,159 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11540,675,100 - 40,720,027 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01540,777,451 - 40,822,052 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01541,051,693 - 41,096,624 (+)NCBIUU_Cfam_GSD_1.0
Dram1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494519,138,514 - 19,196,509 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649212,169,815 - 12,206,845 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649212,171,642 - 12,206,845 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DRAM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl582,290,385 - 82,325,562 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1582,292,578 - 82,325,580 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2586,272,198 - 86,307,734 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DRAM1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11197,136,158 - 97,180,669 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1197,136,578 - 97,180,693 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037147,823,538 - 147,867,881 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


RefSeq Acc Id: XM_004844850   ⟹   XP_004844907
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247506,289,273 - 6,305,112 (-)NCBI
RefSeq Acc Id: XM_013072245   ⟹   XP_012927699
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247506,289,273 - 6,305,112 (-)NCBI
RefSeq Acc Id: XM_021258410   ⟹   XP_021114069
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247506,288,721 - 6,305,112 (-)NCBI
RefSeq Acc Id: XM_021258411   ⟹   XP_021114070
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247506,289,273 - 6,301,937 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004844907 (Get FASTA)   NCBI Sequence Viewer  
  XP_012927699 (Get FASTA)   NCBI Sequence Viewer  
  XP_021114069 (Get FASTA)   NCBI Sequence Viewer  
  XP_021114070 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000013355
RefSeq Acc Id: XP_021114069   ⟸   XM_021258410
- Peptide Label: isoform X2
RefSeq Acc Id: XP_004844907   ⟸   XM_004844850
- Peptide Label: isoform X3
- UniProtKB: G5AME5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_012927699   ⟸   XM_013072245
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021114070   ⟸   XM_021258411
- Peptide Label: isoform X4


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000009546 ENTREZGENE
Ensembl Transcript ENSHGLT00000013495 ENTREZGENE
InterPro Frag1/DRAM/Sfk1 UniProtKB/TrEMBL
NCBI Gene Dram1 ENTREZGENE
PANTHER DNA DAMAGE-REGULATED AUTOPHAGY MODULATOR PROTEIN 1 UniProtKB/TrEMBL
  FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED UniProtKB/TrEMBL
Pfam Frag1 UniProtKB/TrEMBL
UniProt G5AME5 ENTREZGENE, UniProtKB/TrEMBL