Dipk1b (divergent protein kinase domain 1B) - Rat Genome Database

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Gene: Dipk1b (divergent protein kinase domain 1B) Heterocephalus glaber
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Symbol: Dipk1b
Name: divergent protein kinase domain 1B
RGD ID: 18915596
Description: ASSOCIATED WITH Adams-Oliver Syndrome 5 (ortholog); autosomal dominant intellectual developmental disorder 8 (ortholog); autosomal dominant nocturnal frontal lobe epilepsy 5 (ortholog); FOUND IN endoplasmic reticulum (inferred); endoplasmic reticulum membrane (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Fam69b; family with sequence similarity 69 member B; protein FAM69B
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247601,763,440 - 1,770,253 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247601,763,424 - 1,769,277 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
Dipk1b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247601,763,440 - 1,770,253 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247601,763,424 - 1,769,277 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
DIPK1B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389136,712,572 - 136,724,742 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9136,712,572 - 136,724,742 (+)EnsemblGRCh38hg38GRCh38
GRCh379139,607,024 - 139,619,194 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369138,726,851 - 138,738,310 (+)NCBINCBI36Build 36hg18NCBI36
Celera9110,120,381 - 110,132,293 (+)NCBICelera
Cytogenetic Map9q34.3NCBI
HuRef9109,066,420 - 109,078,355 (+)NCBIHuRef
CHM1_19139,755,758 - 139,767,761 (+)NCBICHM1_1
T2T-CHM13v2.09148,945,755 - 148,957,923 (+)NCBIT2T-CHM13v2.0
Dipk1b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39226,518,469 - 26,526,509 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl226,518,469 - 26,526,509 (+)EnsemblGRCm39 Ensembl
GRCm38226,628,457 - 26,636,497 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl226,628,457 - 26,636,497 (+)EnsemblGRCm38mm10GRCm38
MGSCv37226,483,977 - 26,492,017 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36226,450,475 - 26,458,504 (+)NCBIMGSCv36mm8
Celera226,345,966 - 26,354,006 (+)NCBICelera
Cytogenetic Map2A3NCBI
cM Map218.97NCBI
Dipk1b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8329,852,710 - 29,862,248 (+)NCBIGRCr8
mRatBN7.239,455,914 - 9,464,169 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl39,456,409 - 9,464,161 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx312,520,978 - 12,528,745 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0321,104,230 - 21,111,997 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0319,359,557 - 19,367,321 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.034,083,797 - 4,091,550 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl34,083,864 - 4,092,289 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.039,442,976 - 9,450,729 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.434,809,288 - 4,817,041 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.134,815,929 - 4,817,040 (+)NCBI
Celera34,275,849 - 4,283,602 (+)NCBICelera
Cytogenetic Map3p13NCBI
Dipk1b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555134,120,061 - 4,123,971 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555134,120,061 - 4,123,964 (-)NCBIChiLan1.0ChiLan1.0
DIPK1B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2112,661,354 - 2,673,364 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan192,663,689 - 2,675,698 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v09107,786,349 - 107,798,873 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19136,760,243 - 136,769,833 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9136,760,243 - 136,769,833 (+)Ensemblpanpan1.1panPan2
DIPK1B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1948,836,323 - 48,844,827 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl948,837,035 - 48,845,482 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha948,088,539 - 48,096,730 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0949,714,281 - 49,722,471 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl949,714,779 - 49,722,443 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1948,495,439 - 48,503,628 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0948,789,029 - 48,797,233 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0948,836,301 - 48,844,699 (-)NCBIUU_Cfam_GSD_1.0
Dipk1b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947202,209,371 - 202,215,347 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366691,158,819 - 1,164,194 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366691,159,711 - 1,165,667 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DIPK1B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa10.21313,854,419 - 313,862,368 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DIPK1B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1121,467,927 - 1,483,614 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl121,464,007 - 1,483,573 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660583,790,853 - 3,802,228 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000017809   ⟹   ENSHGLP00000017634
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247601,763,440 - 1,770,253 (+)Ensembl
RefSeq Acc Id: XM_004848942   ⟹   XP_004848999
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247601,763,745 - 1,769,277 (+)NCBI
RefSeq Acc Id: XM_004848943   ⟹   XP_004849000
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247601,763,428 - 1,769,277 (+)NCBI
RefSeq Acc Id: XM_021261728   ⟹   XP_021117387
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247601,763,738 - 1,769,277 (+)NCBI
RefSeq Acc Id: XM_021261729   ⟹   XP_021117388
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247601,763,425 - 1,769,277 (+)NCBI
RefSeq Acc Id: XM_021261730   ⟹   XP_021117389
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247601,763,738 - 1,769,277 (+)NCBI
RefSeq Acc Id: XM_021261731   ⟹   XP_021117390
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247601,763,610 - 1,769,277 (+)NCBI
RefSeq Acc Id: XM_021261732   ⟹   XP_021117391
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247601,763,424 - 1,769,277 (+)NCBI
RefSeq Acc Id: XM_021261733   ⟹   XP_021117392
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247601,763,732 - 1,769,277 (+)NCBI
RefSeq Acc Id: XM_021261734   ⟹   XP_021117393
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247601,763,738 - 1,769,277 (+)NCBI
RefSeq Acc Id: XP_021117391   ⟸   XM_021261732
- Peptide Label: isoform X2
RefSeq Acc Id: XP_021117388   ⟸   XM_021261729
- Peptide Label: isoform X1
RefSeq Acc Id: XP_004849000   ⟸   XM_004848943
- Peptide Label: isoform X5
- UniProtKB: G5B8G7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021117390   ⟸   XM_021261731
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021117392   ⟸   XM_021261733
- Peptide Label: isoform X3
RefSeq Acc Id: XP_021117387   ⟸   XM_021261728
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021117393   ⟸   XM_021261734
- Peptide Label: isoform X6
RefSeq Acc Id: XP_021117389   ⟸   XM_021261730
- Peptide Label: isoform X1
RefSeq Acc Id: XP_004848999   ⟸   XM_004848942
- Peptide Label: isoform X4
- UniProtKB: G5B8G7 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000017634   ⟸   ENSHGLT00000017809


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000012618 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000017809 ENTREZGENE
InterPro FAM69_kinase_dom UniProtKB/TrEMBL
  FAM69_N UniProtKB/TrEMBL
NCBI Gene Dipk1b ENTREZGENE
PANTHER DIVERGENT PROTEIN KINASE DOMAIN 1B UniProtKB/TrEMBL
  UNCHARACTERIZED UniProtKB/TrEMBL
Pfam PIP49_C UniProtKB/TrEMBL
  PIP49_N UniProtKB/TrEMBL
SMART PIP49_N UniProtKB/TrEMBL
UniProt G5B8G7 ENTREZGENE, UniProtKB/TrEMBL