Rps14 (ribosomal protein S14) - Rat Genome Database

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Gene: Rps14 (ribosomal protein S14) Heterocephalus glaber
Analyze
Symbol: Rps14
Name: ribosomal protein S14
RGD ID: 18915216
Description: ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN ribosomal small subunit assembly (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); chromosome 5q deletion syndrome (ortholog); FOUND IN cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog); postsynaptic density (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 40S ribosomal protein S14
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247749,726,434 - 9,733,410 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247749,727,216 - 9,733,114 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Rps14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247749,726,434 - 9,733,410 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247749,727,216 - 9,733,114 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
RPS14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385150,442,635 - 150,449,739 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5150,442,635 - 150,449,739 (-)EnsemblGRCh38hg38GRCh38
GRCh375149,822,198 - 149,829,302 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365149,803,985 - 149,809,512 (-)NCBINCBI36Build 36hg18NCBI36
Build 345149,803,996 - 149,809,512NCBI
Celera5145,904,832 - 145,910,362 (-)NCBICelera
Cytogenetic Map5q33.1NCBI
HuRef5144,971,240 - 144,976,773 (-)NCBIHuRef
CHM1_15149,256,215 - 149,261,742 (-)NCBICHM1_1
T2T-CHM13v2.05150,979,169 - 150,986,273 (-)NCBIT2T-CHM13v2.0
Rps14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391860,907,668 - 60,911,618 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1860,880,170 - 60,911,618 (+)EnsemblGRCm39 Ensembl
GRCm381860,774,596 - 60,778,546 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1860,747,098 - 60,778,546 (+)EnsemblGRCm38mm10GRCm38
MGSCv371860,934,250 - 60,938,200 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361860,900,018 - 60,903,913 (+)NCBIMGSCv36mm8
Celera1862,058,375 - 62,062,327 (+)NCBICelera
Cytogenetic Map18E1NCBI
cM Map1834.4NCBI
Rps14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81856,492,010 - 56,503,092 (+)NCBIGRCr8
mRatBN7.21854,227,854 - 54,232,638 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1854,227,854 - 54,233,166 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1856,316,437 - 56,321,412 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01857,031,049 - 57,036,024 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01854,851,742 - 54,856,526 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01856,042,532 - 56,047,316 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1856,044,369 - 56,047,316 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01855,276,797 - 55,281,581 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41856,727,647 - 56,732,431 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11856,799,878 - 56,804,663 (+)NCBI
Celera1852,382,571 - 52,387,355 (+)NCBICelera
Cytogenetic Map18q12.1NCBI
Rps14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554154,102,511 - 4,108,633 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554154,103,223 - 4,108,633 (+)NCBIChiLan1.0ChiLan1.0
RPS14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24145,673,767 - 145,679,526 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15143,813,304 - 143,818,932 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05145,869,410 - 145,875,038 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15151,873,605 - 151,879,170 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5151,873,605 - 151,879,128 (-)Ensemblpanpan1.1panPan2
RPS14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1458,661,335 - 58,667,968 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl458,661,152 - 58,667,964 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha458,427,115 - 58,433,733 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0459,141,543 - 59,148,150 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl459,141,360 - 59,148,146 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1458,930,097 - 58,936,709 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0459,044,779 - 59,051,392 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0459,575,541 - 59,582,143 (+)NCBIUU_Cfam_GSD_1.0
Rps14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213142,921,901 - 142,926,873 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365044,495,693 - 4,502,695 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365044,495,930 - 4,500,843 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RPS14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2151,430,049 - 151,433,856 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12151,430,047 - 151,433,951 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
RPS14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12353,046,670 - 53,052,082 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2353,044,994 - 53,050,194 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603424,660,634 - 24,666,103 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000005832   ⟹   ENSHGLP00000005759
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247749,726,434 - 9,733,410 (-)Ensembl
RefSeq Acc Id: XM_004854423   ⟹   XP_004854480
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247749,727,216 - 9,733,113 (-)NCBI
RefSeq Acc Id: XM_021266221   ⟹   XP_021121880
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247749,727,762 - 9,733,114 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004854480 (Get FASTA)   NCBI Sequence Viewer  
  XP_021121880 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000005759
GenBank Protein JAN96325 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_004854480   ⟸   XM_004854423
- Peptide Label: isoform X1
- UniProtKB: A0A0N8ESF7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021121880   ⟸   XM_021266221
- Peptide Label: isoform X2
RefSeq Acc Id: ENSHGLP00000005759   ⟸   ENSHGLT00000005832


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000004211 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000005832 ENTREZGENE
Gene3D-CATH 3.30.420.80 UniProtKB/TrEMBL
InterPro Ribosomal_S11 UniProtKB/TrEMBL
  Ribosomal_S11_CS UniProtKB/TrEMBL
  Ribosomal_S11_sf UniProtKB/TrEMBL
KEGG Report hgl:101724344 UniProtKB/TrEMBL
NCBI Gene Rps14 ENTREZGENE
PANTHER PTHR11759 UniProtKB/TrEMBL
  RIBOSOMAL PROTEIN S14 UniProtKB/TrEMBL
Pfam Ribosomal_S11 UniProtKB/TrEMBL
PIRSF Ribosomal_S11 UniProtKB/TrEMBL
PROSITE RIBOSOMAL_S11 UniProtKB/TrEMBL
Superfamily-SCOP Translational machinery components UniProtKB/TrEMBL
UniProt A0A0N8ESF7 ENTREZGENE, UniProtKB/TrEMBL