Otog (Heterocephalus glaber - naked mole-rat) |
|
OTOG (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 11 | 17,547,259 - 17,646,044 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 17,547,259 - 17,647,150 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 17,568,806 - 17,667,591 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 17,525,496 - 17,624,067 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 11 | 17,556,386 - 17,617,057 | NCBI | | | | | Celera | 11 | 17,698,900 - 17,797,429 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | p15.1 | NCBI | | | | | HuRef | 11 | 17,252,782 - 17,351,629 (+) | NCBI | | HuRef | | | CHM1_1 | 11 | 17,568,738 - 17,667,255 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 17,644,992 - 17,743,744 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Otog (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 7 | 45,890,411 - 45,960,858 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 7 | 45,890,411 - 45,960,858 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 7 | 46,240,987 - 46,311,434 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 7 | 46,240,987 - 46,311,434 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 7 | 53,496,357 - 53,566,804 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 7 | 46,109,029 - 46,179,476 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 7 | 41,714,550 - 41,784,993 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | B3 | NCBI | | | | | cM Map | 7 | 29.66 | NCBI | | | | |
|
Otog (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 1 | 105,882,747 - 105,951,825 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 96,746,336 - 96,815,416 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 96,746,336 - 96,815,415 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 102,132,474 - 102,201,561 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 110,604,448 - 110,673,536 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 103,894,827 - 103,963,922 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 102,258,124 - 102,327,201 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 102,258,124 - 102,327,201 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 103,342,346 - 103,411,351 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 96,771,215 - 96,840,351 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 96,849,120 - 96,917,280 (+) | NCBI | | | | | Celera | 1 | 90,994,972 - 91,064,101 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q22 | NCBI | | | | |
|
Otog (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955414 | 32,357,054 - 32,433,849 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955414 | 32,353,896 - 32,435,097 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
OTOG (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 9 | 19,880,690 - 19,980,554 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 19,841,138 - 19,940,945 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 17,601,738 - 17,701,472 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 17,287,150 - 17,386,100 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 17,287,150 - 17,386,100 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
OTOG (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 21 | 40,103,163 - 40,193,680 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 21 | 40,106,826 - 40,192,475 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 21 | 39,603,511 - 39,692,219 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 21 | 41,208,874 - 41,297,398 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 21 | 41,212,048 - 41,297,382 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 21 | 40,221,534 - 40,310,382 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 21 | 40,428,751 - 40,518,064 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 21 | 40,767,627 - 40,856,530 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Otog (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404947 | 45,439,874 - 45,515,004 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936528 | 1,475,128 - 1,548,849 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936528 | 1,473,842 - 1,549,586 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
OTOG (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 2 | 41,497,200 - 41,584,948 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 41,497,201 - 41,590,564 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 44,516,586 - 44,610,494 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
OTOG (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 1 | 47,323,579 - 47,428,029 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 47,325,745 - 47,425,607 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 144,738,049 - 144,846,447 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|