Tas2r38 (taste 2 receptor member 38) - Rat Genome Database

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Gene: Tas2r38 (taste 2 receptor member 38) Heterocephalus glaber
Analyze
Symbol: Tas2r38
Name: taste 2 receptor member 38
RGD ID: 18914893
Description: ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); genetic disease (ortholog); Hereditary Pancreatitis (ortholog); FOUND IN plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: taste receptor type 2 member 38
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476521,906,697 - 21,907,716 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Tas2r38
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476521,906,697 - 21,907,716 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
TAS2R38
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387141,972,631 - 141,973,773 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7141,972,631 - 141,973,773 (-)EnsemblGRCh38hg38GRCh38
GRCh377141,672,431 - 141,673,573 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367141,318,900 - 141,320,042 (-)NCBINCBI36Build 36hg18NCBI36
Build 347141,125,671 - 141,126,673NCBI
Celera7136,393,776 - 136,394,918 (-)NCBICelera
Cytogenetic Map7q34NCBI
HuRef7135,968,803 - 135,969,945 (-)NCBIHuRef
CHM1_17141,606,660 - 141,607,802 (-)NCBICHM1_1
T2T-CHM13v2.07143,288,364 - 143,289,506 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27141,010,626 - 141,011,768 (-)NCBI
Tas2r138
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39640,589,249 - 40,590,244 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl640,589,249 - 40,590,244 (-)EnsemblGRCm39 Ensembl
GRCm38640,612,315 - 40,613,310 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl640,612,315 - 40,613,310 (-)EnsemblGRCm38mm10GRCm38
MGSCv37640,562,314 - 40,563,309 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36640,541,922 - 40,542,917 (-)NCBIMGSCv36mm8
Celera640,599,002 - 40,599,998 (-)NCBICelera
Cytogenetic Map6B1NCBI
cM Map618.82NCBI
Tas2r138
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8470,395,042 - 70,396,037 (-)NCBIGRCr8
mRatBN7.2469,428,344 - 69,429,339 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl469,428,344 - 69,429,339 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx474,356,622 - 74,357,617 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0470,277,771 - 70,278,766 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0468,685,381 - 68,686,376 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0468,831,221 - 68,832,216 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl468,831,221 - 68,832,216 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04133,618,347 - 133,619,342 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4468,196,172 - 68,197,167 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera464,418,515 - 64,419,480 (-)NCBICelera
Cytogenetic Map4q23NCBI
Tas2r38
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554941,659,692 - 1,662,712 (+)NCBIChiLan1.0ChiLan1.0
TAS2R38
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26178,753,452 - 178,754,594 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1730,763,707 - 30,764,849 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07133,896,405 - 133,897,535 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17146,365,476 - 146,366,606 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7146,365,527 - 146,366,528 (-)Ensemblpanpan1.1panPan2
TAS2R38
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1167,224,077 - 7,225,027 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl167,224,023 - 7,225,027 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha168,083,355 - 8,084,305 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0167,145,620 - 7,146,570 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl167,145,566 - 7,146,570 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1167,099,027 - 7,099,976 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0166,941,424 - 6,942,374 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0167,009,125 - 7,010,075 (+)NCBIUU_Cfam_GSD_1.0
Tas2r38
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511813,460,239 - 13,462,689 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365925,757,282 - 5,758,182 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TAS2R38
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1187,982,188 - 7,983,921 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2188,357,518 - 8,358,525 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TAS2R38
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121110,671,289 - 110,674,330 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl21110,672,521 - 110,673,519 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660727,359,669 - 7,360,843 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004851359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01046178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_004851359   ⟹   XP_004851416
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462476521,906,697 - 21,907,716 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004851416 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_004851416   ⟸   XM_004851359


Additional Information

Database Acc Id Source(s)
NCBI Gene Tas2r38 ENTREZGENE