Angptl1 (angiopoietin like 1) - Rat Genome Database

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Gene: Angptl1 (angiopoietin like 1) Heterocephalus glaber
Analyze
Symbol: Angptl1
Name: angiopoietin like 1
RGD ID: 18914414
Description: ENCODES a protein that exhibits signaling receptor binding (inferred); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); ASSOCIATED WITH 1q24 Deletion Syndrome (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN collagen-containing extracellular matrix (inferred); extracellular space (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: angiopoietin-related protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247713,466,155 - 3,486,436 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247713,465,761 - 3,486,141 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Angptl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247713,466,155 - 3,486,436 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247713,465,761 - 3,486,141 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
ANGPTL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381178,849,535 - 178,871,077 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1178,849,535 - 178,871,077 (-)EnsemblGRCh38hg38GRCh38
GRCh371178,818,670 - 178,840,212 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361177,085,293 - 177,106,838 (-)NCBINCBI36Build 36hg18NCBI36
Build 341175,550,327 - 175,571,872NCBI
Celera1151,927,509 - 151,949,057 (-)NCBICelera
Cytogenetic Map1q25.2NCBI
HuRef1150,046,286 - 150,067,817 (-)NCBIHuRef
CHM1_11180,242,420 - 180,263,935 (-)NCBICHM1_1
T2T-CHM13v2.01178,204,270 - 178,225,811 (-)NCBIT2T-CHM13v2.0
Angptl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391156,666,495 - 156,688,648 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1156,666,132 - 156,688,648 (+)EnsemblGRCm39 Ensembl
GRCm381156,839,023 - 156,861,078 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1156,838,562 - 156,861,078 (+)EnsemblGRCm38mm10GRCm38
MGSCv371158,769,154 - 158,791,209 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361158,675,700 - 158,697,755 (+)NCBIMGSCv36mm8
Celera1159,236,183 - 159,256,091 (+)NCBICelera
Cytogenetic Map1G3NCBI
cM Map167.75NCBI
Angptl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81371,463,913 - 71,531,810 (+)NCBIGRCr8
mRatBN7.21368,963,186 - 68,981,649 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1368,962,991 - 68,992,570 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1371,551,574 - 71,570,039 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01372,867,707 - 72,886,175 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01370,129,189 - 70,147,657 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01374,456,487 - 74,463,031 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1374,410,010 - 74,474,681 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01379,376,764 - 79,383,308 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41372,039,198 - 72,045,772 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1368,826,260 - 68,832,804 (+)NCBICelera
Cytogenetic Map13q22NCBI
Angptl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540618,203,310 - 18,224,789 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540618,160,164 - 18,224,822 (-)NCBIChiLan1.0ChiLan1.0
ANGPTL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2170,881,808 - 70,903,475 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1170,550,466 - 70,571,243 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01154,339,139 - 154,360,540 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11158,030,657 - 158,052,089 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1158,030,657 - 158,052,089 (-)Ensemblpanpan1.1panPan2
ANGPTL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1720,919,192 - 20,945,140 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl720,919,214 - 20,940,792 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha720,445,917 - 20,467,496 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0720,658,122 - 20,682,799 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl720,658,125 - 20,684,039 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1720,565,042 - 20,586,622 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0720,673,117 - 20,694,703 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0720,808,240 - 20,829,825 (+)NCBIUU_Cfam_GSD_1.0
Angptl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934492,201,783 - 92,224,286 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648110,048,475 - 10,071,134 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648110,048,439 - 10,071,035 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANGPTL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9120,654,092 - 120,680,390 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19120,656,313 - 120,684,313 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29132,389,252 - 132,413,525 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ANGPTL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12550,468,283 - 50,489,283 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2550,468,826 - 50,490,343 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605551,997,890 - 52,019,658 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000016107   ⟹   ENSHGLP00000015941
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247713,466,155 - 3,486,436 (+)Ensembl
RefSeq Acc Id: XM_004853370   ⟹   XP_004853427
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247713,465,761 - 3,486,141 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004853427 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000015941
  ENSHGLP00100053515
GenBank Protein JAO03338 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_004853427   ⟸   XM_004853370
- UniProtKB: A0A0P6JMP1 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000015941   ⟸   ENSHGLT00000016107


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000011389 Ensembl, ENTREZGENE
  ENSHGLG00100010900 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000016107 ENTREZGENE
  ENSHGLT00100043610 UniProtKB/TrEMBL
Gene3D-CATH 3.90.215.10 UniProtKB/TrEMBL
InterPro Fibrinogen-like_C UniProtKB/TrEMBL
  Fibrinogen_a/b/g_C_1 UniProtKB/TrEMBL
  Fibrinogen_a/b/g_C_dom UniProtKB/TrEMBL
  Fibrinogen_CS UniProtKB/TrEMBL
KEGG Report hgl:101708101 UniProtKB/TrEMBL
NCBI Gene Angptl1 ENTREZGENE
PANTHER ANGIOPOIETIN-RELATED PROTEIN 1 UniProtKB/TrEMBL
  FIBRINOGEN/TENASCIN/ANGIOPOEITIN UniProtKB/TrEMBL
Pfam Fibrinogen_C UniProtKB/TrEMBL
PROSITE FIBRINOGEN_C_1 UniProtKB/TrEMBL
  FIBRINOGEN_C_2 UniProtKB/TrEMBL
SMART FBG UniProtKB/TrEMBL
Superfamily-SCOP SSF56496 UniProtKB/TrEMBL
UniProt A0A0P6JMP1 ENTREZGENE, UniProtKB/TrEMBL