Bora (BORA aurora kinase A activator) - Rat Genome Database

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Gene: Bora (BORA aurora kinase A activator) Heterocephalus glaber
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Symbol: Bora
Name: BORA aurora kinase A activator
RGD ID: 18914231
Description: ENCODES a protein that exhibits protein kinase binding (inferred); INVOLVED IN regulation of protein localization (ortholog); ASSOCIATED WITH chromosome 13q14 deletion syndrome (ortholog); FOUND IN meiotic spindle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: protein aurora borealis
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475127,789,093 - 27,815,445 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475127,788,754 - 27,814,986 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
meiotic spindle  (ISO)
nucleus  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Bora
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475127,789,093 - 27,815,445 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475127,788,754 - 27,814,986 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
BORA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381372,727,923 - 72,756,196 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1372,727,749 - 72,756,198 (+)EnsemblGRCh38hg38GRCh38
GRCh371373,302,061 - 73,330,334 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361372,200,043 - 72,228,329 (+)NCBINCBI36Build 36hg18NCBI36
Celera1354,200,530 - 54,228,790 (+)NCBICelera
Cytogenetic Map13q21.33NCBI
HuRef1353,999,585 - 54,027,635 (+)NCBIHuRef
CHM1_11373,269,762 - 73,298,008 (+)NCBICHM1_1
T2T-CHM13v2.01371,949,448 - 71,977,692 (+)NCBIT2T-CHM13v2.0
Bora
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391499,283,880 - 99,311,976 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1499,283,658 - 99,311,976 (+)EnsemblGRCm39 Ensembl
GRCm381499,046,377 - 99,074,540 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1499,046,222 - 99,074,540 (+)EnsemblGRCm38mm10GRCm38
MGSCv371499,445,596 - 99,473,326 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361497,929,511 - 97,957,241 (+)NCBIMGSCv36mm8
Celera1497,720,752 - 97,749,866 (+)NCBICelera
Cytogenetic Map14E2.2NCBI
cM Map1449.23NCBI
Bora
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81582,205,467 - 82,243,499 (+)NCBIGRCr8
mRatBN7.21575,797,624 - 75,835,599 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1575,797,891 - 75,821,322 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1579,780,918 - 79,805,541 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01580,857,536 - 80,882,159 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01577,805,079 - 77,829,702 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01583,442,217 - 83,463,737 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1583,442,144 - 83,463,717 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01586,953,333 - 86,975,601 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41582,829,209 - 82,852,061 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11582,844,988 - 82,867,842 (+)NCBI
Celera1575,035,699 - 75,061,119 (+)NCBICelera
Cytogenetic Map15q21NCBI
Bora
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540433,924,533 - 33,946,346 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540433,923,496 - 33,946,113 (-)NCBIChiLan1.0ChiLan1.0
BORA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21474,307,848 - 74,337,454 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11372,899,069 - 72,927,715 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01353,956,913 - 53,985,355 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11372,733,006 - 72,761,432 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1372,733,006 - 72,761,432 (+)Ensemblpanpan1.1panPan2
BORA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12226,880,351 - 26,906,226 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2226,879,933 - 26,906,278 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2226,735,652 - 26,762,114 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02227,211,177 - 27,237,646 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2227,211,198 - 27,237,661 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12226,873,278 - 26,899,746 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02226,912,735 - 26,939,190 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02226,984,118 - 27,010,590 (+)NCBIUU_Cfam_GSD_1.0
Bora
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945132,690,249 - 132,717,450 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365118,107,756 - 8,134,683 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365118,107,476 - 8,134,677 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BORA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1145,018,333 - 45,045,126 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11145,017,651 - 45,045,127 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21149,564,863 - 49,592,665 (+)NCBISscrofa10.2Sscrofa10.2susScr3
BORA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1351,860,304 - 51,888,410 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl351,860,405 - 51,887,416 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660467,954,590 - 7,982,558 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000019328   ⟹   ENSHGLP00000019137
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462475127,789,093 - 27,815,445 (-)Ensembl
Ensembl Acc Id: ENSHGLT00000019329   ⟹   ENSHGLP00000019138
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462475127,789,093 - 27,815,445 (-)Ensembl
Ensembl Acc Id: ENSHGLT00000019330   ⟹   ENSHGLP00000019139
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462475127,789,795 - 27,815,445 (-)Ensembl
RefSeq Acc Id: XM_004845258   ⟹   XP_004845315
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475127,788,754 - 27,814,896 (-)NCBI
RefSeq Acc Id: XM_013072405   ⟹   XP_012927859
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475127,788,754 - 27,814,986 (-)NCBI
RefSeq Acc Id: XM_021258675   ⟹   XP_021114334
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475127,788,754 - 27,814,986 (-)NCBI
RefSeq Acc Id: XM_021258676   ⟹   XP_021114335
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475127,788,754 - 27,814,738 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004845315 (Get FASTA)   NCBI Sequence Viewer  
  XP_012927859 (Get FASTA)   NCBI Sequence Viewer  
  XP_021114334 (Get FASTA)   NCBI Sequence Viewer  
  XP_021114335 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000019137
  ENSHGLP00000019138
RefSeq Acc Id: XP_021114334   ⟸   XM_021258675
- Peptide Label: isoform X2
- UniProtKB: G5C9E3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_012927859   ⟸   XM_013072405
- Peptide Label: isoform X1
- UniProtKB: G5C9E3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004845315   ⟸   XM_004845258
- Peptide Label: isoform X3
- UniProtKB: G5C9E3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021114335   ⟸   XM_021258676
- Peptide Label: isoform X3
- UniProtKB: G5C9E3 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000019137   ⟸   ENSHGLT00000019328
Ensembl Acc Id: ENSHGLP00000019139   ⟸   ENSHGLT00000019330
Ensembl Acc Id: ENSHGLP00000019138   ⟸   ENSHGLT00000019329


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000013729 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000019328 ENTREZGENE
  ENSHGLT00000019329 ENTREZGENE
InterPro Aurora_borealis_protein UniProtKB/TrEMBL
NCBI Gene Bora ENTREZGENE
PANTHER PROTEIN AURORA BOREALIS UniProtKB/TrEMBL
  UNCHARACTERIZED UniProtKB/TrEMBL
Pfam BORA_N UniProtKB/TrEMBL
PRINTS AURORABORA UniProtKB/TrEMBL
UniProt A0AAX6P6W1_HETGA UniProtKB/TrEMBL
  A0AAX6QX37_HETGA UniProtKB/TrEMBL
  A0AAX6T0G1_HETGA UniProtKB/TrEMBL
  G5C9E3 ENTREZGENE, UniProtKB/TrEMBL