Faim2 (Fas apoptotic inhibitory molecule 2) - Rat Genome Database

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Gene: Faim2 (Fas apoptotic inhibitory molecule 2) Heterocephalus glaber
Analyze
Symbol: Faim2
Name: Fas apoptotic inhibitory molecule 2
RGD ID: 18913741
Description: INVOLVED IN apoptotic signaling pathway (ortholog); cerebellar granular layer development (ortholog); cerebellar Purkinje cell differentiation (ortholog); PARTICIPATES IN FasL mediated signaling pathway; ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); genetic disease (ortholog); FOUND IN membrane raft (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: protein lifeguard 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248162,386,647 - 2,420,274 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248162,386,995 - 2,418,312 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Faim2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248162,386,647 - 2,420,274 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248162,386,995 - 2,418,312 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
FAIM2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381249,866,896 - 49,903,900 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1249,866,896 - 49,904,217 (-)EnsemblGRCh38hg38GRCh38
GRCh371250,260,679 - 50,297,683 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361248,546,947 - 48,583,987 (-)NCBINCBI36Build 36hg18NCBI36
Build 341248,546,946 - 48,583,987NCBI
Celera1249,056,734 - 49,093,776 (-)NCBICelera
Cytogenetic Map12q13.12NCBI
HuRef1247,291,842 - 47,330,172 (-)NCBIHuRef
CHM1_11250,227,016 - 50,263,951 (-)NCBICHM1_1
T2T-CHM13v2.01249,829,908 - 49,867,294 (-)NCBIT2T-CHM13v2.0
Faim2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391599,394,886 - 99,432,757 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1599,394,893 - 99,426,046 (-)EnsemblGRCm39 Ensembl
GRCm381599,497,005 - 99,534,880 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1599,497,012 - 99,528,165 (-)EnsemblGRCm38mm10GRCm38
MGSCv371599,327,436 - 99,358,448 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361599,325,039 - 99,356,051 (-)NCBIMGSCv36mm8
Celera15101,652,607 - 101,683,625 (-)NCBICelera
Cytogenetic Map15F1NCBI
cM Map1556.13NCBI
Faim2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87132,512,095 - 132,539,192 (-)NCBIGRCr8
mRatBN7.27130,632,368 - 130,659,353 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7130,633,348 - 130,659,168 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7132,436,973 - 132,462,777 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07134,662,553 - 134,688,359 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07134,575,068 - 134,600,878 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07141,158,769 - 141,185,781 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7141,157,963 - 141,185,710 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X115,663,275 - 115,689,093 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47138,246,372 - 138,272,190 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17138,322,809 - 138,348,627 (-)NCBI
Celera7127,115,377 - 127,141,090 (-)NCBICelera
Cytogenetic Map7q36NCBI
Faim2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955547466,777 - 501,490 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955547467,331 - 501,172 (-)NCBIChiLan1.0ChiLan1.0
FAIM2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21044,283,833 - 44,320,109 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11244,280,595 - 44,316,871 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01238,850,588 - 38,886,614 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11239,744,705 - 39,780,702 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1239,744,700 - 39,780,702 (+)Ensemblpanpan1.1panPan2
FAIM2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1274,802,711 - 4,831,230 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl274,798,235 - 4,827,917 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2741,426,513 - 41,459,677 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0274,847,381 - 4,880,528 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl274,847,346 - 4,880,527 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1274,813,057 - 4,846,157 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0274,802,365 - 4,835,546 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02741,821,388 - 41,854,554 (-)NCBIUU_Cfam_GSD_1.0
Faim2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494565,588,905 - 65,620,783 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365127,544,003 - 7,576,315 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365127,544,047 - 7,575,922 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FAIM2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl515,779,334 - 15,812,543 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1515,779,329 - 15,813,029 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
FAIM2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11146,100,437 - 46,131,046 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1146,099,895 - 46,131,155 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037199,989,447 - 200,026,442 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000006954   ⟹   ENSHGLP00000006870
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248162,386,647 - 2,420,274 (+)Ensembl
RefSeq Acc Id: XM_004863008   ⟹   XP_004863065
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248162,387,315 - 2,418,312 (+)NCBI
RefSeq Acc Id: XM_004863009   ⟹   XP_004863066
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248162,386,995 - 2,418,312 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004863065 (Get FASTA)   NCBI Sequence Viewer  
  XP_004863066 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000006870
  ENSHGLP00000046680
  ENSHGLP00000051282
GenBank Protein JAN97334 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_004863066   ⟸   XM_004863009
- UniProtKB: A0A0P6J260 (UniProtKB/TrEMBL),   G5AU10 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004863065   ⟸   XM_004863008
- UniProtKB: A0A0P6J260 (UniProtKB/TrEMBL),   G5AU10 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000006870   ⟸   ENSHGLT00000006954


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000005016 Ensembl, ENTREZGENE
  ENSHGLG00000033168 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000006954 ENTREZGENE
  ENSHGLT00000067444 UniProtKB/TrEMBL
  ENSHGLT00000081423 UniProtKB/TrEMBL
InterPro Bax_inhibitor_1-related UniProtKB/TrEMBL
KEGG Report hgl:101707310 UniProtKB/TrEMBL
NCBI Gene Faim2 ENTREZGENE
PANTHER PROTEIN LIFEGUARD 2 UniProtKB/TrEMBL
  PTHR23291 UniProtKB/TrEMBL
Pfam Bax1-I UniProtKB/TrEMBL
UniProt A0A0P6J260 ENTREZGENE, UniProtKB/TrEMBL
  G5AU10 ENTREZGENE, UniProtKB/TrEMBL