S1pr5 (sphingosine-1-phosphate receptor 5) - Rat Genome Database

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Gene: S1pr5 (sphingosine-1-phosphate receptor 5) Heterocephalus glaber
Analyze
Symbol: S1pr5
Name: sphingosine-1-phosphate receptor 5
RGD ID: 18913399
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN regulation of neuron differentiation (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); FOUND IN presynapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: sphingosine 1-phosphate receptor 5
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248282,592,475 - 2,601,943 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248282,590,664 - 2,602,136 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
S1pr5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248282,592,475 - 2,601,943 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248282,590,664 - 2,602,136 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
S1PR5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381910,512,742 - 10,517,965 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1910,512,742 - 10,517,931 (-)EnsemblGRCh38hg38GRCh38
GRCh371910,623,418 - 10,628,641 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361910,484,623 - 10,489,112 (-)NCBINCBI36Build 36hg18NCBI36
Build 341910,484,622 - 10,489,112NCBI
Celera1910,518,131 - 10,523,388 (-)NCBICelera
Cytogenetic Map19p13.2NCBI
HuRef1910,201,961 - 10,207,399 (-)NCBIHuRef
CHM1_11910,624,176 - 10,629,433 (-)NCBICHM1_1
T2T-CHM13v2.01910,639,179 - 10,644,407 (-)NCBIT2T-CHM13v2.0
S1pr5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39921,154,213 - 21,159,739 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl921,154,208 - 21,159,739 (-)EnsemblGRCm39 Ensembl
GRCm38921,242,917 - 21,248,443 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl921,242,912 - 21,248,443 (-)EnsemblGRCm38mm10GRCm38
MGSCv37921,047,361 - 21,052,887 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36920,993,319 - 20,996,611 (-)NCBIMGSCv36mm8
Celera918,512,032 - 18,517,558 (-)NCBICelera
Cytogenetic Map9A3NCBI
cM Map97.75NCBI
S1pr5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8828,062,841 - 28,068,013 (-)NCBIGRCr8
mRatBN7.2819,786,676 - 19,791,862 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl819,786,663 - 19,791,795 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx823,806,109 - 23,811,040 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0822,103,954 - 22,108,885 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0820,016,404 - 20,021,375 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0822,268,635 - 22,273,708 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl822,268,657 - 22,270,647 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0822,323,891 - 22,328,932 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4820,278,404 - 20,283,375 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1820,278,403 - 20,283,375 (-)NCBI
Celera821,180,228 - 21,185,199 (-)NCBICelera
Cytogenetic Map8q13NCBI
S1pr5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554951,717,549 - 1,722,257 (-)NCBIChiLan1.0ChiLan1.0
S1PR5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22015,430,929 - 15,436,593 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11914,429,534 - 14,435,210 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01910,064,332 - 10,069,999 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11910,726,661 - 10,731,230 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1910,727,527 - 10,728,728 (-)Ensemblpanpan1.1panPan2
S1PR5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12050,641,585 - 50,646,938 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2050,643,619 - 50,644,815 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2050,513,495 - 50,518,968 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02051,164,592 - 51,170,064 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2051,165,296 - 51,168,809 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12050,371,184 - 50,376,633 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02050,799,276 - 50,804,758 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02051,040,334 - 51,045,813 (+)NCBIUU_Cfam_GSD_1.0
S1pr5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118209,551,873 - 209,557,153 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936659798,707 - 799,903 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936659798,259 - 801,563 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
S1PR5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl269,293,546 - 69,298,377 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1269,293,537 - 69,299,408 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2269,646,773 - 69,649,084 (-)NCBISscrofa10.2Sscrofa10.2susScr3
S1PR5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.169,537,083 - 9,542,610 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl69,538,156 - 9,539,352 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607410,456,440 - 10,461,715 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000007829   ⟹   ENSHGLP00000007743
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248282,592,475 - 2,601,943 (-)Ensembl
RefSeq Acc Id: XM_004865500   ⟹   XP_004865557
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248282,590,664 - 2,602,136 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004865557 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000007743
Reference Protein Sequences
RefSeq Acc Id: XP_004865557   ⟸   XM_004865500
- UniProtKB: G5BUH1 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000007743   ⟸   ENSHGLT00000007829


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000005615 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000007829 ENTREZGENE
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro EDG8_S1P_rcpt UniProtKB/TrEMBL
  GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  S1P_rcpt UniProtKB/TrEMBL
NCBI Gene S1pr5 ENTREZGENE
PANTHER G-PROTEIN COUPLED RECEPTOR UniProtKB/TrEMBL
  SPHINGOSINE 1-PHOSPHATE RECEPTOR 5 UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/TrEMBL
PRINTS EDG8RECEPTOR UniProtKB/TrEMBL
  GPCRRHODOPSN UniProtKB/TrEMBL
  S1PRECEPTOR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
SMART 7TM_GPCR_Srsx UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt G5BUH1 ENTREZGENE, UniProtKB/TrEMBL