Espl1 (extra spindle pole bodies like 1, separase) - Rat Genome Database

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Gene: Espl1 (extra spindle pole bodies like 1, separase) Heterocephalus glaber
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Symbol: Espl1
Name: extra spindle pole bodies like 1, separase
RGD ID: 18913288
Description: ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); homologous chromosome segregation (ortholog); meiosis I (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); breast cancer (ortholog); COVID-19 (ortholog); FOUND IN centrosome (inferred); cytoplasm (inferred); mitotic spindle (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: extra spindle pole bodies homolog 1; Separin
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249041,305,000 - 1,330,761 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249041,305,040 - 1,330,505 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
centrosome  (IEA)
cytoplasm  (IEA)
mitotic spindle  (IEA)
nucleus  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Espl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249041,305,000 - 1,330,761 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249041,305,040 - 1,330,505 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
ESPL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381253,268,299 - 53,293,638 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1253,268,299 - 53,293,638 (+)EnsemblGRCh38hg38GRCh38
GRCh371253,662,083 - 53,687,422 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361251,948,350 - 51,973,694 (+)NCBINCBI36Build 36hg18NCBI36
Build 341251,948,817 - 51,973,694NCBI
Celera1253,311,187 - 53,336,713 (+)NCBICelera
Cytogenetic Map12q13.13NCBI
HuRef1250,703,798 - 50,728,935 (+)NCBIHuRef
CHM1_11253,628,380 - 53,653,869 (+)NCBICHM1_1
T2T-CHM13v2.01253,233,854 - 53,259,351 (+)NCBIT2T-CHM13v2.0
Espl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3915102,204,688 - 102,232,792 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl15102,204,701 - 102,232,792 (+)EnsemblGRCm39 Ensembl
GRCm3815102,296,254 - 102,324,357 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl15102,296,266 - 102,324,357 (+)EnsemblGRCm38mm10GRCm38
MGSCv3715102,126,724 - 102,154,787 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3615102,124,359 - 102,152,390 (+)NCBIMGSCv36mm8
Celera15104,453,712 - 104,481,413 (+)NCBICelera
Cytogenetic Map15F2NCBI
cM Map1557.45NCBI
Espl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87135,302,460 - 135,329,570 (+)NCBIGRCr8
mRatBN7.27133,424,027 - 133,450,984 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7133,424,130 - 133,450,984 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7135,185,119 - 135,211,984 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07137,414,499 - 137,441,364 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07137,399,660 - 137,426,528 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07143,896,890 - 143,923,868 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7143,897,014 - 143,923,868 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07141,692,925 - 141,719,617 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.07143,153,049 - 143,161,944 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47141,048,197 - 141,074,383 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17141,126,857 - 141,150,662 (+)NCBI
Celera7129,857,507 - 129,884,392 (+)NCBICelera
Cytogenetic Map7q36NCBI
Espl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955458530,797 - 553,985 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955458530,269 - 553,919 (+)NCBIChiLan1.0ChiLan1.0
ESPL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21040,892,230 - 40,918,541 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11240,887,281 - 40,915,313 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01235,460,500 - 35,486,794 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11236,241,364 - 36,266,594 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1236,241,533 - 36,266,101 (-)Ensemblpanpan1.1panPan2
ESPL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1271,911,179 - 1,934,446 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl271,911,193 - 1,933,807 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2744,314,872 - 44,338,083 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0271,915,651 - 1,938,901 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl271,915,665 - 1,938,966 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1271,933,939 - 1,957,164 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0271,918,870 - 1,942,108 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02744,715,570 - 44,738,805 (+)NCBIUU_Cfam_GSD_1.0
Espl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494562,588,213 - 62,619,030 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493651210,556,672 - 10,576,588 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493651210,556,269 - 10,576,582 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ESPL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl518,487,052 - 18,509,913 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1518,486,969 - 18,509,913 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2518,922,397 - 18,945,652 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ESPL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11149,374,333 - 49,401,801 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037196,658,194 - 196,684,208 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000010652   ⟹   ENSHGLP00000010535
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046249041,305,000 - 1,330,761 (+)Ensembl
Ensembl Acc Id: ENSHGLT00000010653   ⟹   ENSHGLP00000010536
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046249041,305,000 - 1,330,761 (+)Ensembl
RefSeq Acc Id: XM_004872730   ⟹   XP_004872787
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249041,305,040 - 1,330,505 (+)NCBI
RefSeq Acc Id: XM_021250588   ⟹   XP_021106247
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249041,305,040 - 1,330,505 (+)NCBI
RefSeq Acc Id: XM_021250589   ⟹   XP_021106248
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249041,305,040 - 1,330,505 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004872787 (Get FASTA)   NCBI Sequence Viewer  
  XP_021106247 (Get FASTA)   NCBI Sequence Viewer  
  XP_021106248 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB09078 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000010535
  ENSHGLP00000010536
RefSeq Acc Id: XP_004872787   ⟸   XM_004872730
- Peptide Label: isoform X1
- UniProtKB: G5BIG7 (UniProtKB/TrEMBL),   A0AAX6QG57 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021106247   ⟸   XM_021250588
- Peptide Label: isoform X2
- UniProtKB: G5BIG7 (UniProtKB/TrEMBL),   A0AAX6SBC7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021106248   ⟸   XM_021250589
- Peptide Label: isoform X3
- UniProtKB: G5BIG7 (UniProtKB/TrEMBL),   A0AAX6SBI4 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000010536   ⟸   ENSHGLT00000010653
Ensembl Acc Id: ENSHGLP00000010535   ⟸   ENSHGLT00000010652


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000007558 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000010652 ENTREZGENE
  ENSHGLT00000010653 ENTREZGENE
InterPro Peptidase_C50 UniProtKB/TrEMBL
  SEPARIN_core_dom UniProtKB/TrEMBL
NCBI Gene Espl1 ENTREZGENE
PANTHER EXTRA SPINDLE POLES 1-RELATED UniProtKB/TrEMBL
  SEPARIN UniProtKB/TrEMBL
Pfam Peptidase_C50 UniProtKB/TrEMBL
PROSITE SEPARIN UniProtKB/TrEMBL
UniProt A0AAX6QG57 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6SBC7 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6SBI4 ENTREZGENE, UniProtKB/TrEMBL
  G5BIG7 ENTREZGENE, UniProtKB/TrEMBL