Mtfr1l (mitochondrial fission regulator 1 like) - Rat Genome Database

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Gene: Mtfr1l (mitochondrial fission regulator 1 like) Heterocephalus glaber
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Symbol: Mtfr1l
Name: mitochondrial fission regulator 1 like
RGD ID: 18912353
Description: INVOLVED IN aerobic respiration (inferred); mitochondrial fission (inferred); ASSOCIATED WITH autosomal recessive hypercholesterolemia (ortholog); genetic disease (ortholog); retinitis pigmentosa 59 (ortholog); FOUND IN mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: mitochondrial fission regulator 1-like
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247649,908,021 - 9,919,541 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247649,907,990 - 9,920,446 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Mtfr1l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247649,908,021 - 9,919,541 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247649,907,990 - 9,920,446 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
MTFR1L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38125,819,954 - 25,832,938 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl125,818,640 - 25,832,942 (+)EnsemblGRCh38hg38GRCh38
GRCh37126,146,445 - 26,159,429 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36126,018,984 - 26,032,020 (+)NCBINCBI36Build 36hg18NCBI36
Celera124,542,498 - 24,555,529 (+)NCBICelera
Cytogenetic Map1p36.11NCBI
HuRef124,402,335 - 24,415,366 (+)NCBIHuRef
CHM1_1126,259,672 - 26,272,702 (+)NCBICHM1_1
T2T-CHM13v2.0125,657,395 - 25,670,373 (+)NCBIT2T-CHM13v2.0
Mtfr1l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394134,252,866 - 134,262,698 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4134,252,861 - 134,262,698 (-)EnsemblGRCm39 Ensembl
GRCm384134,525,555 - 134,535,387 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4134,525,550 - 134,535,387 (-)EnsemblGRCm38mm10GRCm38
MGSCv374134,081,477 - 134,091,174 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364133,797,638 - 133,807,335 (-)NCBIMGSCv36mm8
Celera4132,708,462 - 132,718,115 (-)NCBICelera
Cytogenetic Map4D3NCBI
cM Map466.83NCBI
Mtfr1l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85152,020,617 - 152,030,417 (-)NCBIGRCr8
mRatBN7.25146,736,927 - 146,746,891 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5146,736,927 - 146,746,784 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5149,438,869 - 149,448,645 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05151,209,068 - 151,218,865 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05151,195,113 - 151,204,889 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05152,736,580 - 152,746,683 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5152,736,585 - 152,746,588 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05156,522,178 - 156,532,268 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45153,282,197 - 153,291,993 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15153,292,235 - 153,302,032 (-)NCBI
Celera5145,151,841 - 145,161,638 (-)NCBICelera
Cytogenetic Map5q36NCBI
Mtfr1l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554525,314,252 - 5,324,193 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554525,312,944 - 5,324,193 (+)NCBIChiLan1.0ChiLan1.0
MTFR1L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21201,041,172 - 201,054,236 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11200,139,088 - 200,152,152 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0125,078,463 - 25,091,546 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1126,145,924 - 26,158,980 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl126,145,924 - 26,158,980 (+)Ensemblpanpan1.1panPan2
MTFR1L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1274,116,837 - 74,133,414 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl274,117,649 - 74,132,758 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha270,691,839 - 70,708,406 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0274,678,783 - 74,695,351 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl274,676,656 - 74,694,837 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1271,502,374 - 71,518,939 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0272,509,265 - 72,525,830 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0273,513,155 - 73,529,722 (-)NCBIUU_Cfam_GSD_1.0
Mtfr1l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505844,573,844 - 44,585,878 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647410,398,208 - 10,413,622 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647410,398,656 - 10,410,261 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MTFR1L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl683,265,420 - 83,280,250 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1683,265,351 - 83,277,774 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2676,822,128 - 76,833,017 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MTFR1L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120106,937,244 - 106,950,459 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20106,934,315 - 106,950,483 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660339,466,233 - 9,479,626 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


RefSeq Acc Id: ENSHGLT00000024206   ⟹   ENSHGLP00000023988
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247649,908,021 - 9,919,541 (+)Ensembl
RefSeq Acc Id: XM_004850618   ⟹   XP_004850675
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247649,907,990 - 9,920,446 (+)NCBI
RefSeq Acc Id: XM_004850619   ⟹   XP_004850676
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247649,907,990 - 9,920,446 (+)NCBI
RefSeq Acc Id: XM_021263094   ⟹   XP_021118753
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247649,911,016 - 9,920,446 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004850675 (Get FASTA)   NCBI Sequence Viewer  
  XP_004850676 (Get FASTA)   NCBI Sequence Viewer  
  XP_021118753 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000023988
RefSeq Acc Id: XP_004850675   ⟸   XM_004850618
- Peptide Label: isoform X1
- UniProtKB: G5BHV9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004850676   ⟸   XM_004850619
- Peptide Label: isoform X2
- UniProtKB: G5BHV9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021118753   ⟸   XM_021263094
- Peptide Label: isoform X1
- UniProtKB: G5BHV9 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000023988   ⟸   ENSHGLT00000024206


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000017097 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000024206 ENTREZGENE
InterPro Mtfr1 UniProtKB/TrEMBL
NCBI Gene Mtfr1l ENTREZGENE
PANTHER MITOCHONDRIAL FISSION REGULATOR 1-LIKE UniProtKB/TrEMBL
  PROTEIN OF UNKNOWN FUNCTION DUF729 UniProtKB/TrEMBL
Pfam Mito_fiss_reg UniProtKB/TrEMBL
UniProt G5BHV9 ENTREZGENE, UniProtKB/TrEMBL