Lhfpl7 (LHFPL tetraspan subfamily member 7) - Rat Genome Database

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Gene: Lhfpl7 (LHFPL tetraspan subfamily member 7) Heterocephalus glaber
Analyze
Symbol: Lhfpl7
Name: LHFPL tetraspan subfamily member 7
RGD ID: 18911774
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Tmem211; transmembrane protein 211
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247472,097,246 - 2,103,065 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Lhfpl7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247472,097,246 - 2,103,065 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
LHFPL7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382224,935,098 - 24,946,694 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2224,935,098 - 24,946,695 (-)EnsemblGRCh38hg38GRCh38
GRCh372225,331,065 - 25,342,661 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362223,661,208 - 23,665,314 (-)NCBINCBI36Build 36hg18NCBI36
Celera229,135,586 - 9,139,692 (-)NCBICelera
Cytogenetic Map22q11.23NCBI
HuRef228,279,978 - 8,284,084 (-)NCBIHuRef
CHM1_12225,289,941 - 25,294,051 (-)NCBICHM1_1
T2T-CHM13v2.02225,396,656 - 25,408,280 (-)NCBIT2T-CHM13v2.0
Lhfpl7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395113,374,775 - 113,388,089 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5113,374,775 - 113,387,129 (+)EnsemblGRCm39 Ensembl
GRCm385113,226,909 - 113,240,223 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5113,226,909 - 113,239,263 (+)EnsemblGRCm38mm10GRCm38
MGSCv375113,655,929 - 113,668,283 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365113,467,212 - 113,479,566 (+)NCBIMGSCv36mm8
Celera5110,347,217 - 110,359,579 (+)NCBICelera
Cytogenetic Map5FNCBI
cM Map555.43NCBI
Lhfpl7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81249,053,607 - 49,057,890 (-)NCBIGRCr8
mRatBN7.21243,393,166 - 43,397,472 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1243,391,632 - 43,401,320 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01249,401,768 - 49,406,037 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1249,401,667 - 49,412,796 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01251,176,003 - 51,180,329 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41244,402,030 - 44,406,180 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1244,989,759 - 44,994,028 (-)NCBICelera
Cytogenetic Map12q16NCBI
Lhfpl7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955455237,252 - 250,819 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955455237,462 - 251,622 (+)NCBIChiLan1.0ChiLan1.0
LHFPL7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22334,834,916 - 34,847,287 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12237,533,704 - 37,545,943 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0225,890,285 - 5,906,573 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12223,557,166 - 23,569,025 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2223,557,401 - 23,561,701 (-)Ensemblpanpan1.1panPan2
LHFPL7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12619,063,479 - 19,076,840 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2619,063,490 - 19,067,467 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2618,929,649 - 18,942,920 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02619,428,993 - 19,442,271 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2619,428,993 - 19,432,966 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12619,134,508 - 19,147,696 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02619,400,207 - 19,413,403 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02619,469,329 - 19,482,639 (-)NCBIUU_Cfam_GSD_1.0
Lhfpl7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118115,720,864 - 115,724,495 (+)NCBIHiC_Itri_2
LHFPL7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1442,980,659 - 42,989,722 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11442,980,177 - 42,987,894 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21445,711,611 - 45,716,115 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LHFPL7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1198,031,900 - 8,043,244 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl198,032,037 - 8,036,169 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666045118,222,893 - 118,227,473 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021257755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01026528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_021257755   ⟹   XP_021113414
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247472,097,246 - 2,103,065 (+)NCBI
Protein Sequences
Protein RefSeqs XP_021113414 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_021113414   ⟸   XM_021257755


Additional Information

Database Acc Id Source(s)
NCBI Gene Tmem211 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-12-14 Lhfpl7  LHFPL tetraspan subfamily member 7  Tmem211  transmembrane protein 211  Symbol and/or name change 5135510 APPROVED