Pyurf (PIGY upstream open reading frame) - Rat Genome Database

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Gene: Pyurf (PIGY upstream open reading frame) Heterocephalus glaber
Analyze
Symbol: Pyurf
Name: PIGY upstream open reading frame (Ensembl:PIGY upstream reading frame)
RGD ID: 18910549
Description: INVOLVED IN protein stabilization (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); genetic disease (ortholog); hyperphosphatasia with impaired intellectual development syndrome 6 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: PIGY upstream reading frame; protein preY, mitochondrial
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475716,159,818 - 16,162,062 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475716,159,773 - 16,161,568 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
Pyurf
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475716,159,818 - 16,162,062 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475716,159,773 - 16,161,568 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
PYURF
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38488,520,998 - 88,523,776 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl488,520,998 - 88,523,776 (-)EnsemblGRCh38hg38GRCh38
GRCh37489,442,149 - 89,444,927 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map4q22.1NCBI
HuRef485,194,129 - 85,196,952 (-)NCBIHuRef
CHM1_1489,418,607 - 89,421,430 (-)NCBICHM1_1
T2T-CHM13v2.0491,852,644 - 91,855,421 (-)NCBIT2T-CHM13v2.0
Pyurf
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39657,661,724 - 57,669,063 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl657,663,561 - 57,669,063 (-)EnsemblGRCm39 Ensembl
GRCm38657,684,739 - 57,692,078 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl657,686,576 - 57,692,078 (-)EnsemblGRCm38mm10GRCm38
MGSCv37657,634,733 - 57,642,072 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36657,616,154 - 57,621,648 (-)NCBIMGSCv36mm8
Celera658,428,459 - 58,435,743 (-)NCBICelera
Cytogenetic Map6B3NCBI
cM Map627.82NCBI
Pyurf
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8488,832,008 - 88,835,643 (+)NCBIGRCr8
mRatBN7.2487,501,859 - 87,505,494 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl487,501,859 - 87,505,494 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx492,723,796 - 92,727,441 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0488,499,201 - 88,502,846 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0486,862,207 - 86,865,856 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0488,584,242 - 88,587,877 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl488,584,242 - 88,587,877 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04153,407,117 - 153,410,752 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4487,255,932 - 87,258,211 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera482,266,776 - 82,270,411 (+)NCBICelera
Cytogenetic Map4q24NCBI
Pyurf
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495547411,944,579 - 11,945,906 (+)NCBIChiLan1.0ChiLan1.0
LOC100973017
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2386,525,171 - 86,525,386 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1486,787,084 - 86,787,859 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0480,810,555 - 80,813,324 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1491,533,268 - 91,535,958 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl491,533,268 - 91,536,850 (-)Ensemblpanpan1.1panPan2
PYURF
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13211,808,967 - 11,812,436 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3211,808,967 - 11,812,640 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3230,142,083 - 30,145,550 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03211,862,485 - 11,865,750 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3211,862,485 - 11,866,045 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13211,945,115 - 11,953,351 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03211,770,336 - 11,773,820 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03228,143,333 - 28,146,819 (+)NCBIUU_Cfam_GSD_1.0
Pyurf
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530129,568,066 - 29,570,585 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936685982,499 - 988,368 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936685985,007 - 987,646 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PYURF
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.18130,527,571 - 130,529,983 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28139,940,891 - 139,943,304 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PIGY
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1736,882,467 - 36,885,287 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl736,882,372 - 36,885,186 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603715,633,646 - 15,636,466 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000010858   ⟹   ENSHGLP00000010736
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462475716,159,818 - 16,162,062 (-)Ensembl
RefSeq Acc Id: XM_004848061   ⟹   XP_004848118
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475716,159,773 - 16,161,568 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004848118 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000010736
  ENSHGLP00000050525
  ENSHGLP00100041042
GenBank Protein JAN97539 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_004848118   ⟸   XM_004848061
- UniProtKB: A0A0P6J4S3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000010736   ⟸   ENSHGLT00000010858


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000007700 Ensembl, ENTREZGENE
  ENSHGLG00000040751 UniProtKB/TrEMBL
  ENSHGLG00100041170 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000010858 ENTREZGENE
  ENSHGLT00000043808 UniProtKB/TrEMBL
  ENSHGLT00100092076 UniProtKB/TrEMBL
Gene3D-CATH 2.20.25.10 UniProtKB/TrEMBL
InterPro Trm112-like UniProtKB/TrEMBL
KEGG Report hgl:101725651 UniProtKB/TrEMBL
NCBI Gene Pyurf ENTREZGENE
PANTHER PROTEIN PREY, MITOCHONDRIAL UniProtKB/TrEMBL
  ZGC:162634 UniProtKB/TrEMBL
Pfam Trm112p UniProtKB/TrEMBL
Superfamily-SCOP Trm112p-like UniProtKB/TrEMBL
UniProt A0A0P6J4S3 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-16 Pyurf  PIGY upstream open reading frame  Pyurf  PIGY upstream reading frame  Symbol and/or name change 5135510 APPROVED