Cdca2 (cell division cycle associated 2) - Rat Genome Database

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Gene: Cdca2 (cell division cycle associated 2) Heterocephalus glaber
Analyze
Symbol: Cdca2
Name: cell division cycle associated 2
RGD ID: 18910093
Description: INVOLVED IN chromosome segregation (ortholog); positive regulation of protein dephosphorylation (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2E (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: cell division cycle-associated protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475820,491,118 - 20,538,653 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475820,490,902 - 20,537,171 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
chromosome  (IEA)
cytosol  (ISO)
nucleoplasm  (ISO)
nucleus  (IEA)

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Cdca2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475820,491,118 - 20,538,653 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475820,490,902 - 20,537,171 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
CDCA2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38825,458,931 - 25,507,917 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl825,459,199 - 25,507,911 (+)EnsemblGRCh38hg38GRCh38
GRCh37825,316,447 - 25,365,433 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36825,372,428 - 25,421,342 (+)NCBINCBI36Build 36hg18NCBI36
Build 34825,372,429 - 25,421,342NCBI
Celera824,278,060 - 24,326,920 (+)NCBICelera
Cytogenetic Map8p21.2NCBI
HuRef823,861,484 - 23,910,346 (+)NCBIHuRef
CHM1_1825,517,979 - 25,566,826 (+)NCBICHM1_1
T2T-CHM13v2.0825,734,151 - 25,783,086 (+)NCBIT2T-CHM13v2.0
Cdca2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391467,910,629 - 67,953,290 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1467,913,780 - 67,953,290 (-)EnsemblGRCm39 Ensembl
GRCm381467,673,180 - 67,715,841 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1467,676,331 - 67,715,841 (-)EnsemblGRCm38mm10GRCm38
MGSCv371468,294,411 - 68,333,898 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361466,629,951 - 66,660,755 (-)NCBIMGSCv36mm8
Celera1465,433,981 - 65,473,487 (-)NCBICelera
Cytogenetic Map14D1NCBI
cM Map1434.66NCBI
Cdca2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81546,071,360 - 46,117,524 (-)NCBIGRCr8
mRatBN7.21541,895,946 - 41,942,226 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1541,895,901 - 41,941,611 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1543,760,646 - 43,806,313 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01544,910,867 - 44,956,534 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01543,356,180 - 43,401,847 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01544,365,396 - 44,411,601 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1544,365,405 - 44,411,004 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01547,185,590 - 47,231,348 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41547,225,711 - 47,271,412 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11547,241,861 - 47,287,342 (-)NCBI
Celera1541,559,981 - 41,605,879 (-)NCBICelera
Cytogenetic Map15p12NCBI
Cdca2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540348,375,287 - 48,419,955 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540348,374,276 - 48,417,130 (+)NCBIChiLan1.0ChiLan1.0
CDCA2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2743,998,888 - 44,049,042 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1819,713,275 - 19,763,433 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0824,739,705 - 24,788,898 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1821,648,782 - 21,697,584 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl821,650,086 - 21,697,584 (+)Ensemblpanpan1.1panPan2
CDCA2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12531,943,649 - 31,997,101 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2531,947,094 - 31,996,022 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2532,528,674 - 32,582,189 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02532,142,593 - 32,196,409 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2532,145,921 - 32,195,032 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12532,098,317 - 32,152,106 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02531,947,903 - 32,001,606 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02532,113,782 - 32,166,984 (-)NCBIUU_Cfam_GSD_1.0
Cdca2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049439,940,250 - 9,997,577 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367571,195,567 - 1,248,237 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367571,195,604 - 1,249,367 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CDCA2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl149,518,201 - 9,566,588 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1149,517,763 - 9,571,303 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21410,682,849 - 10,731,706 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CDCA2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1823,582,062 - 23,631,590 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl823,582,744 - 23,632,045 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605218,535,616 - 18,584,889 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000012406   ⟹   ENSHGLP00000012272
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462475820,491,118 - 20,538,653 (+)Ensembl
RefSeq Acc Id: XM_004848362   ⟹   XP_004848419
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475820,490,903 - 20,537,171 (+)NCBI
RefSeq Acc Id: XM_004848363   ⟹   XP_004848420
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475820,491,168 - 20,537,171 (+)NCBI
RefSeq Acc Id: XM_004848364   ⟹   XP_004848421
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475820,490,902 - 20,537,171 (+)NCBI
RefSeq Acc Id: XM_021261295   ⟹   XP_021116954
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475820,491,303 - 20,537,171 (+)NCBI
RefSeq Acc Id: XM_021261297   ⟹   XP_021116956
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475820,491,303 - 20,537,171 (+)NCBI
RefSeq Acc Id: XM_021261298   ⟹   XP_021116957
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475820,491,843 - 20,537,171 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_004848421   ⟸   XM_004848364
- Peptide Label: isoform X2
- UniProtKB: G5BYA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004848419   ⟸   XM_004848362
- Peptide Label: isoform X1
- UniProtKB: G5BYA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004848420   ⟸   XM_004848363
- Peptide Label: isoform X1
- UniProtKB: G5BYA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021116954   ⟸   XM_021261295
- Peptide Label: isoform X1
- UniProtKB: G5BYA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021116956   ⟸   XM_021261297
- Peptide Label: isoform X1
- UniProtKB: G5BYA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021116957   ⟸   XM_021261298
- Peptide Label: isoform X3
RefSeq Acc Id: ENSHGLP00000012272   ⟸   ENSHGLT00000012406


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000008774 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000012406 ENTREZGENE
InterPro PP1-bd UniProtKB/TrEMBL
NCBI Gene Cdca2 ENTREZGENE
PANTHER ANTIGEN KI-67-LIKE PROTEIN UniProtKB/TrEMBL
  CELL DIVISION CYCLE-ASSOCIATED PROTEIN 2 UniProtKB/TrEMBL
Pfam PP1_bind UniProtKB/TrEMBL
UniProt G5BYA6 ENTREZGENE, UniProtKB/TrEMBL