Mtx1 (metaxin 1) - Rat Genome Database

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Pathways
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Gene: Mtx1 (metaxin 1) Heterocephalus glaber
Analyze
Symbol: Mtx1
Name: metaxin 1
RGD ID: 18909327
Description: INVOLVED IN lactation (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH Charcot-Marie-Tooth disease type 2 (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN SAM complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Metaxin-1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248852,321,324 - 2,327,518 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Mtx1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248852,321,324 - 2,327,518 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
MTX1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381155,208,695 - 155,213,839 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1155,208,695 - 155,213,824 (+)EnsemblGRCh38hg38GRCh38
GRCh371155,178,486 - 155,183,630 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361153,445,114 - 153,450,249 (+)NCBINCBI36Build 36hg18NCBI36
Build 341151,991,562 - 151,996,695NCBI
Celera1128,251,772 - 128,256,908 (+)NCBICelera
Cytogenetic Map1q22NCBI
HuRef1126,541,594 - 126,546,584 (+)NCBIHuRef
CHM1_11156,573,997 - 156,579,132 (+)NCBICHM1_1
T2T-CHM13v2.01154,347,258 - 154,352,402 (+)NCBIT2T-CHM13v2.0
Mtx1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39389,116,388 - 89,121,214 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl389,116,388 - 89,134,395 (-)EnsemblGRCm39 Ensembl
GRCm38389,209,081 - 89,213,907 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl389,209,081 - 89,227,088 (-)EnsemblGRCm38mm10GRCm38
MGSCv37389,013,003 - 89,018,257 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36389,295,016 - 89,299,832 (-)NCBIMGSCv36mm8
Celera389,242,763 - 89,248,017 (-)NCBICelera
Cytogenetic Map3F1NCBI
cM Map339.01NCBI
Mtx1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82176,913,225 - 176,919,148 (-)NCBIGRCr8
mRatBN7.22174,615,460 - 174,621,383 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2174,615,461 - 174,620,982 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2181,761,310 - 181,766,913 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02179,783,682 - 179,789,285 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02174,383,530 - 174,389,131 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02188,522,605 - 188,528,747 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2188,521,785 - 188,528,195 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02207,937,065 - 207,942,985 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42181,379,690 - 181,381,406 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera2168,557,760 - 168,563,282 (-)NCBICelera
Cytogenetic Map2q34NCBI
Mtx1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555451,676,292 - 1,682,106 (+)NCBIChiLan1.0ChiLan1.0
LOC100987557
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2194,630,272 - 94,635,659 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1194,361,612 - 94,366,383 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01130,553,631 - 130,558,744 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11134,160,837 - 134,165,028 (+)NCBIpanpan1.1PanPan1.1panPan2
MTX1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1742,322,755 - 42,327,918 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl742,322,762 - 42,328,701 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha741,813,631 - 41,818,613 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0742,191,958 - 42,196,940 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl742,191,965 - 42,196,510 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1741,971,776 - 41,976,758 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0742,025,701 - 42,030,683 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0742,309,258 - 42,314,242 (-)NCBIUU_Cfam_GSD_1.0
Mtx1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505825,679,637 - 25,685,034 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365804,710,024 - 4,715,411 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MTX1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl494,606,562 - 94,611,865 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1494,606,576 - 94,611,439 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24103,389,161 - 103,394,252 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MTX1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1208,617,321 - 8,621,899 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660387,948,955 - 7,954,267 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_004871279   ⟹   XP_004871336
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248852,321,324 - 2,327,518 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004871336 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB07315 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000025263
  ENSHGLP00100050230
Reference Protein Sequences
RefSeq Acc Id: XP_004871336   ⟸   XM_004871279


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000017998 UniProtKB/TrEMBL
  ENSHGLG00100043333 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000025485 UniProtKB/TrEMBL
  ENSHGLT00100049392 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1050.10 UniProtKB/TrEMBL
InterPro Glutathione-S-Trfase_C_sf UniProtKB/TrEMBL
  Glutathione_S-Trfase UniProtKB/TrEMBL
  Metaxin UniProtKB/TrEMBL
  Metaxin_GST UniProtKB/TrEMBL
  Sam37/metaxin_N UniProtKB/TrEMBL
KEGG Report hgl:101703494 UniProtKB/TrEMBL
NCBI Gene Mtx1 ENTREZGENE
PANTHER METAXIN RELATED UniProtKB/TrEMBL
  METAXIN-1 UniProtKB/TrEMBL
Pfam GST_C_6 UniProtKB/TrEMBL
  Tom37 UniProtKB/TrEMBL
PIRSF Metaxin UniProtKB/TrEMBL
Superfamily-SCOP SSF47616 UniProtKB/TrEMBL
UniProt G5BDF4_HETGA UniProtKB/TrEMBL