Magee2 (MAGE family member E2) - Rat Genome Database

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Gene: Magee2 (MAGE family member E2) Heterocephalus glaber
Analyze
Symbol: Magee2
Name: MAGE family member E2
RGD ID: 18908963
Description: ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); syndromic X-linked intellectual disability Lubs type (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: melanoma-associated antigen E2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248365,040,440 - 5,042,334 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Magee2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248365,040,440 - 5,042,334 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
MAGEE2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X75,782,987 - 75,785,254 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX75,782,987 - 75,785,254 (-)EnsemblGRCh38hg38GRCh38
GRCh37X75,002,822 - 75,005,089 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X74,919,548 - 74,921,796 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X74,785,843 - 74,788,092NCBI
CeleraX75,286,151 - 75,288,407 (-)NCBICelera
Cytogenetic MapXq13.3NCBI
HuRefX68,636,741 - 68,638,996 (-)NCBIHuRef
CHM1_1X74,895,669 - 74,897,925 (-)NCBICHM1_1
T2T-CHM13v2.0X74,216,673 - 74,218,940 (-)NCBIT2T-CHM13v2.0
Magee2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X103,898,558 - 103,900,873 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX103,898,558 - 103,900,873 (-)EnsemblGRCm39 Ensembl
GRCm38X104,854,952 - 104,857,267 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX104,854,952 - 104,857,267 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X102,050,291 - 102,052,606 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X101,057,671 - 101,059,875 (-)NCBIMGSCv36mm8
CeleraX91,728,756 - 91,731,078 (-)NCBICelera
Cytogenetic MapXDNCBI
cM MapX46.77NCBI
Magee2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X73,951,433 - 74,010,525 (+)NCBIGRCr8
mRatBN7.2X69,885,751 - 69,944,824 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX69,942,533 - 69,944,657 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX71,451,596 - 71,453,720 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X74,951,881 - 74,954,005 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X72,511,457 - 72,513,581 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X75,737,684 - 75,795,206 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX75,792,931 - 75,795,055 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X76,537,710 - 76,595,148 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X92,944,523 - 92,946,647 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX71,286,892 - 71,289,016 (+)NCBICelera
Cytogenetic MapXq22NCBI
Magee2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555621,804,437 - 1,807,099 (-)NCBIChiLan1.0ChiLan1.0
MAGEE2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X75,429,205 - 75,431,629 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X75,432,855 - 75,435,242 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X65,030,659 - 65,033,059 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X75,141,998 - 75,144,309 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX75,142,500 - 75,144,068 (-)Ensemblpanpan1.1panPan2
MAGEE2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X58,877,193 - 58,879,518 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX58,877,722 - 58,879,293 (-)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.0X60,109,448 - 60,111,767 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX60,109,982 - 60,111,553 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X57,797,220 - 57,799,539 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X59,417,054 - 59,419,373 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X59,015,922 - 59,018,241 (-)NCBIUU_Cfam_GSD_1.0
Magee2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X43,256,515 - 43,258,796 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366831,689,463 - 1,691,034 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366831,688,981 - 1,691,250 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAGEE2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX60,709,534 - 60,711,829 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X60,707,490 - 60,711,883 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
MAGEE2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X65,244,718 - 65,247,582 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX65,245,359 - 65,246,930 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606716,359,398 - 16,362,396 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021246510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01085675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_021246510   ⟹   XP_021102169
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248365,040,440 - 5,042,334 (+)NCBI
Protein Sequences
Protein RefSeqs XP_021102169 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_021102169   ⟸   XM_021246510


Additional Information

Database Acc Id Source(s)
NCBI Gene Magee2 ENTREZGENE