Rhag (Rh associated glycoprotein) - Rat Genome Database

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Gene: Rhag (Rh associated glycoprotein) Heterocephalus glaber
Analyze
Symbol: Rhag
Name: Rh associated glycoprotein
RGD ID: 18908827
Description: ENCODES a protein that exhibits ankyrin binding (ortholog); carbon dioxide transmembrane transporter activity (ortholog); leak channel activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); carbon dioxide transmembrane transport (ortholog); carbon dioxide transport (ortholog); ASSOCIATED WITH genetic disease (ortholog); hemolytic anemia (ortholog); overhydrated hereditary stomatocytosis (ortholog); FOUND IN ankyrin-1 complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Ammonium transporter Rh type A
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479914,446,288 - 14,467,106 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479914,445,270 - 14,467,161 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Rhag
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479914,446,288 - 14,467,106 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479914,445,270 - 14,467,161 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
RHAG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38649,605,175 - 49,636,839 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl649,605,175 - 49,636,839 (-)EnsemblGRCh38hg38GRCh38
GRCh37649,572,888 - 49,604,552 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36649,680,847 - 49,712,546 (-)NCBINCBI36Build 36hg18NCBI36
Build 34649,680,850 - 49,712,511NCBI
Celera651,129,020 - 51,160,725 (-)NCBICelera
Cytogenetic Map6p12.3ENTREZGENE
HuRef649,302,584 - 49,334,437 (-)NCBIHuRef
CHM1_1649,575,821 - 49,607,510 (-)NCBICHM1_1
T2T-CHM13v2.0649,447,195 - 49,478,851 (-)NCBIT2T-CHM13v2.0
Rhag
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391741,121,990 - 41,154,985 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1741,122,017 - 41,151,645 (+)EnsemblGRCm39 Ensembl
GRCm381740,811,099 - 40,844,094 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1740,811,126 - 40,840,754 (+)EnsemblGRCm38mm10GRCm38
MGSCv371740,948,098 - 40,977,703 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361740,274,633 - 40,304,238 (+)NCBIMGSCv36mm8
Celera1744,216,540 - 44,246,099 (+)NCBICelera
Cytogenetic Map17B2NCBI
cM Map1719.54NCBI
Rhag
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8927,566,349 - 27,594,390 (-)NCBIGRCr8
mRatBN7.2920,069,800 - 20,097,836 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl920,069,807 - 20,097,836 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx928,641,038 - 28,669,067 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0933,715,588 - 33,743,623 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0932,026,353 - 32,054,431 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0923,465,190 - 23,493,081 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl923,465,197 - 23,493,081 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0922,323,155 - 22,351,046 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4915,940,864 - 15,968,319 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1916,206,790 - 16,234,831 (-)NCBI
Celera917,746,824 - 17,774,869 (-)NCBICelera
Cytogenetic Map9q13NCBI
Rhag
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554118,335,230 - 8,353,465 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554118,335,223 - 8,354,430 (+)NCBIChiLan1.0ChiLan1.0
RHAG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2564,089,124 - 64,120,783 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1659,953,964 - 59,985,644 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0649,174,973 - 49,206,667 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1650,436,504 - 50,468,203 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl650,436,307 - 50,468,250 (-)Ensemblpanpan1.1panPan2
RHAG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11217,433,660 - 17,454,323 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1217,433,670 - 17,454,311 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1217,333,447 - 17,354,099 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01217,929,429 - 17,950,114 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1217,929,439 - 17,950,091 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11217,449,489 - 17,469,874 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01217,554,969 - 17,575,628 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01217,684,421 - 17,705,041 (-)NCBIUU_Cfam_GSD_1.0
Rhag
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494652,851,930 - 52,885,730 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647611,081,652 - 11,107,211 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647611,081,631 - 11,106,636 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RHAG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl743,703,876 - 43,729,995 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1743,704,152 - 43,730,944 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2750,018,284 - 50,044,481 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RHAG
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11722,779,382 - 22,809,771 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1722,779,751 - 22,809,192 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604449,565,602 - 49,600,316 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000003146   ⟹   ENSHGLP00000003091
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462479914,446,288 - 14,467,106 (-)Ensembl
RefSeq Acc Id: XM_004860301   ⟹   XP_004860358
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479914,445,270 - 14,467,161 (-)NCBI
RefSeq Acc Id: XM_013077946   ⟹   XP_012933400
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479914,445,270 - 14,467,028 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004860358 (Get FASTA)   NCBI Sequence Viewer  
  XP_012933400 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB08383 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000003091
Reference Protein Sequences
RefSeq Acc Id: XP_004860358   ⟸   XM_004860301
- Peptide Label: isoform X1
- UniProtKB: G5BGH2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_012933400   ⟸   XM_013077946
- Peptide Label: isoform X2
RefSeq Acc Id: ENSHGLP00000003091   ⟸   ENSHGLT00000003146


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000002312 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000003146 ENTREZGENE
Gene3D-CATH Ammonium transporter AmtB like domains UniProtKB/TrEMBL
InterPro Ammonium/urea_transptr UniProtKB/TrEMBL
  NH4_transpt_AmtB-like_dom UniProtKB/TrEMBL
  RhesusRHD UniProtKB/TrEMBL
NCBI Gene Rhag ENTREZGENE
PANTHER AMMONIUM TRANSPORTER UniProtKB/TrEMBL
  AMMONIUM TRANSPORTER RH TYPE A UniProtKB/TrEMBL
Pfam Ammonium_transp UniProtKB/TrEMBL
PRINTS RHESUSRHD UniProtKB/TrEMBL
Superfamily-SCOP Ammonium transporter UniProtKB/TrEMBL
UniProt G5BGH2 ENTREZGENE, UniProtKB/TrEMBL