Rasl11b (RAS like family 11 member B) - Rat Genome Database

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Gene: Rasl11b (RAS like family 11 member B) Heterocephalus glaber
Analyze
Symbol: Rasl11b
Name: RAS like family 11 member B
RGD ID: 18908690
Description: ENCODES a protein that exhibits GTP binding (inferred); GTPase activity (inferred); nucleotide binding (inferred); INVOLVED IN negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH genetic disease (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Ras-like protein family member 11B
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476116,762,762 - 16,767,197 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074  


Genomics

Comparative Map Data
Rasl11b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476116,762,762 - 16,767,197 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
RASL11B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38452,862,317 - 52,866,835 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl452,862,317 - 52,866,835 (+)EnsemblGRCh38hg38GRCh38
GRCh37453,728,484 - 53,733,002 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36453,423,252 - 53,427,759 (+)NCBINCBI36Build 36hg18NCBI36
Build 34453,569,422 - 53,573,929NCBI
Celera451,225,048 - 51,229,555 (+)NCBICelera
Cytogenetic Map4q12NCBI
HuRef449,672,576 - 49,677,083 (+)NCBIHuRef
CHM1_1453,764,440 - 53,768,947 (+)NCBICHM1_1
T2T-CHM13v2.0456,349,196 - 56,353,714 (+)NCBIT2T-CHM13v2.0
Rasl11b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39574,355,987 - 74,360,138 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl574,355,947 - 74,360,142 (+)EnsemblGRCm39 Ensembl
GRCm38574,195,326 - 74,199,477 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl574,195,286 - 74,199,481 (+)EnsemblGRCm38mm10GRCm38
MGSCv37574,591,351 - 74,595,502 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36574,471,919 - 74,481,181 (+)NCBIMGSCv36mm8
Celera571,458,527 - 71,462,667 (+)NCBICelera
Cytogenetic Map5C3.3NCBI
cM Map539.43NCBI
Rasl11b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81434,369,029 - 34,373,250 (-)NCBIGRCr8
mRatBN7.21434,014,924 - 34,019,146 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1434,014,509 - 34,019,152 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1434,363,949 - 34,368,153 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01435,671,520 - 35,675,724 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01434,157,012 - 34,161,217 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01436,550,353 - 36,554,574 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1436,550,340 - 36,554,580 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01436,378,160 - 36,382,381 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41436,392,945 - 36,397,168 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11436,395,380 - 36,399,603 (-)NCBI
Celera1433,278,302 - 33,282,880 (-)NCBICelera
Cytogenetic Map14p11NCBI
Rasl11b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544717,755,277 - 17,758,830 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544717,755,277 - 17,758,827 (-)NCBIChiLan1.0ChiLan1.0
RASL11B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2376,955,553 - 76,960,069 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1477,160,176 - 77,164,502 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0471,101,709 - 71,106,235 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1477,655,454 - 77,659,972 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl477,655,461 - 77,659,972 (-)Ensemblpanpan1.1panPan2
RASL11B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11345,579,587 - 45,583,945 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1345,579,417 - 45,583,503 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1345,531,238 - 45,535,542 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01346,188,054 - 46,192,379 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1346,187,850 - 46,192,376 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11345,856,729 - 45,861,052 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01345,390,780 - 45,395,114 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01346,266,848 - 46,271,176 (+)NCBIUU_Cfam_GSD_1.0
Rasl11b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528530,562,040 - 30,566,350 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648215,731,771 - 15,736,206 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648215,731,822 - 15,736,195 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RASL11B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl839,703,423 - 39,708,170 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1839,703,399 - 39,708,174 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2841,829,659 - 41,834,404 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RASL11B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1715,629,976 - 15,634,625 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl715,629,974 - 15,634,372 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606616,568,057 - 16,572,591 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_004849722   ⟹   XP_004849779
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462476116,762,762 - 16,767,197 (-)NCBI
RefSeq Acc Id: XM_021262349   ⟹   XP_021118008
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462476116,762,762 - 16,766,231 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004849779 (Get FASTA)   NCBI Sequence Viewer  
  XP_021118008 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB00570 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000026258
  ENSHGLP00100048440
Reference Protein Sequences
RefSeq Acc Id: XP_004849779   ⟸   XM_004849722
- Peptide Label: isoform X1
- UniProtKB: G5AU59 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021118008   ⟸   XM_021262349
- Peptide Label: isoform X2


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000018686 ENTREZGENE
  ENSHGLG00100012272 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000026493 ENTREZGENE
  ENSHGLT00100089490 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL
InterPro P-loop_NTPase UniProtKB/TrEMBL
  Small_GTP-bd_dom UniProtKB/TrEMBL
  Small_GTPase UniProtKB/TrEMBL
KEGG Report hgl:101702755 UniProtKB/TrEMBL
NCBI Gene Rasl11b ENTREZGENE
PANTHER RAS-LIKE FAMILY MEMBER 11 UniProtKB/TrEMBL
  RAS-LIKE PROTEIN FAMILY MEMBER 11B UniProtKB/TrEMBL
Pfam Ras UniProtKB/TrEMBL
PRINTS RASTRNSFRMNG UniProtKB/TrEMBL
PROSITE RAB UniProtKB/TrEMBL
  RAS UniProtKB/TrEMBL
SMART RAB UniProtKB/TrEMBL
  RAS UniProtKB/TrEMBL
  RHO UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt G5AU59 ENTREZGENE, UniProtKB/TrEMBL