Anapc16 (anaphase promoting complex subunit 16) - Rat Genome Database

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Gene: Anapc16 (anaphase promoting complex subunit 16) Heterocephalus glaber
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Symbol: Anapc16
Name: anaphase promoting complex subunit 16
RGD ID: 18906492
Description: INVOLVED IN anaphase-promoting complex-dependent catabolic process (inferred); cell division (inferred); protein branched polyubiquitination (inferred); FOUND IN anaphase-promoting complex (inferred); chromosome (inferred); chromosome, centromeric region (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: anaphase-promoting complex subunit 16
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247546,009,151 - 6,023,908 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247546,009,255 - 6,031,023 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Anapc16
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247546,009,151 - 6,023,908 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247546,009,255 - 6,031,023 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
ANAPC16
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381072,216,012 - 72,235,860 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1072,216,000 - 72,235,860 (+)EnsemblGRCh38hg38GRCh38
GRCh371073,975,770 - 73,995,618 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361073,645,812 - 73,665,624 (+)NCBINCBI36Build 36hg18NCBI36
Build 341073,645,811 - 73,665,622NCBI
Celera1067,259,517 - 67,279,309 (+)NCBICelera
Cytogenetic Map10q22.1NCBI
HuRef1067,970,007 - 67,989,866 (+)NCBIHuRef
CHM1_11074,257,500 - 74,277,376 (+)NCBICHM1_1
T2T-CHM13v2.01073,087,082 - 73,106,898 (+)NCBIT2T-CHM13v2.0
Anapc16
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391059,823,730 - 59,838,935 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1059,823,231 - 59,838,957 (-)EnsemblGRCm39 Ensembl
GRCm381059,987,409 - 60,003,135 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1059,987,409 - 60,003,135 (-)EnsemblGRCm38mm10GRCm38
MGSCv371059,450,657 - 59,465,860 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361059,383,266 - 59,398,469 (-)NCBIMGSCv36mm8
Celera1061,085,094 - 61,100,402 (-)NCBICelera
Cytogenetic Map10B4NCBI
cM Map1029.66NCBI
Anapc16
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82028,470,282 - 28,484,601 (-)NCBIGRCr8
mRatBN7.22027,927,334 - 27,941,644 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2027,927,334 - 27,941,984 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2028,938,989 - 28,953,312 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02028,325,249 - 28,339,573 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02029,068,021 - 29,082,282 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02029,544,626 - 29,558,928 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2029,544,629 - 29,558,321 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02031,349,974 - 31,364,634 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42027,287,617 - 27,301,901 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera2029,368,635 - 29,382,937 (-)NCBICelera
Cytogenetic Map20q11NCBI
Anapc16
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543719,367,662 - 19,381,603 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543719,367,662 - 19,381,607 (-)NCBIChiLan1.0ChiLan1.0
ANAPC16
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2884,366,537 - 84,384,361 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11084,371,858 - 84,391,347 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01068,738,800 - 68,758,677 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11071,206,662 - 71,224,186 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1071,206,662 - 71,224,186 (+)Ensemblpanpan1.1panPan2
ANAPC16
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1422,860,893 - 22,889,249 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl422,876,631 - 22,888,882 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha422,996,918 - 23,025,486 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0423,140,144 - 23,169,201 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl423,155,500 - 23,170,126 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1423,041,473 - 23,070,216 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0423,241,967 - 23,270,950 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0423,595,751 - 23,624,506 (+)NCBIUU_Cfam_GSD_1.0
Anapc16
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721358,187,775 - 58,203,952 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365216,678,755 - 6,697,488 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365216,680,119 - 6,696,661 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANAPC16
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1475,082,740 - 75,093,074 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11475,082,673 - 75,093,078 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21481,089,430 - 81,099,835 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANAPC16
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1959,076,800 - 59,096,000 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl959,074,739 - 59,096,432 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604819,712,879 - 19,732,491 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000017720   ⟹   ENSHGLP00000017545
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247546,009,151 - 6,023,908 (+)Ensembl
RefSeq Acc Id: XM_004846236   ⟹   XP_004846293
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247546,009,257 - 6,024,804 (+)NCBI
RefSeq Acc Id: XM_004846238   ⟹   XP_004846295
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247546,009,260 - 6,024,804 (+)NCBI
RefSeq Acc Id: XM_021259591   ⟹   XP_021115250
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247546,009,255 - 6,031,023 (+)NCBI
RefSeq Acc Id: XM_021259592   ⟹   XP_021115251
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247546,009,595 - 6,031,023 (+)NCBI
RefSeq Acc Id: XM_021259593   ⟹   XP_021115252
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247546,009,595 - 6,024,804 (+)NCBI
RefSeq Acc Id: XP_021115250   ⟸   XM_021259591
- Peptide Label: isoform X1
RefSeq Acc Id: XP_004846293   ⟸   XM_004846236
- Peptide Label: isoform X2
- UniProtKB: G5C2I3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004846295   ⟸   XM_004846238
- Peptide Label: isoform X3
RefSeq Acc Id: XP_021115251   ⟸   XM_021259592
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021115252   ⟸   XM_021259593
- Peptide Label: isoform X3
Ensembl Acc Id: ENSHGLP00000017545   ⟸   ENSHGLT00000017720


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000012554 Ensembl, ENTREZGENE
  ENSHGLG00100011940 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000017720 ENTREZGENE
  ENSHGLT00100049189 UniProtKB/TrEMBL
InterPro APC16 UniProtKB/TrEMBL
KEGG Report hgl:101725384 UniProtKB/TrEMBL
NCBI Gene Anapc16 ENTREZGENE
PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 16 UniProtKB/TrEMBL
  PTHR31564 UniProtKB/TrEMBL
Pfam ANAPC16 UniProtKB/TrEMBL
UniProt A0AAX6T3Y8_HETGA UniProtKB/TrEMBL
  A0AAX6T5N3_HETGA UniProtKB/TrEMBL
  G5C2I3 ENTREZGENE, UniProtKB/TrEMBL