Cdc20 (cell division cycle 20) - Rat Genome Database

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Gene: Cdc20 (cell division cycle 20) Heterocephalus glaber
Analyze
Symbol: Cdc20
Name: cell division cycle 20
RGD ID: 18906105
Description: ENCODES a protein that exhibits histone deacetylase binding (ortholog); INVOLVED IN mitotic sister chromatid cohesion (ortholog); mitotic spindle assembly (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease dominant intermediate C (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN anaphase-promoting complex (ortholog); centrosome (ortholog); mitotic checkpoint complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: cell division cycle protein 20 homolog; Cell division cycle protein 20-like protein
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248922,675,754 - 2,679,793 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248922,675,980 - 2,679,709 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Cdc20
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248922,675,754 - 2,679,793 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248922,675,980 - 2,679,709 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
CDC20
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38143,358,981 - 43,363,203 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl143,358,981 - 43,363,203 (+)EnsemblGRCh38hg38GRCh38
GRCh37143,824,652 - 43,828,874 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36143,597,213 - 43,601,461 (+)NCBINCBI36Build 36hg18NCBI36
Build 34143,493,720 - 43,497,964NCBI
Celera142,106,780 - 42,111,028 (+)NCBICelera
Cytogenetic Map1p34.2NCBI
HuRef141,944,368 - 41,948,616 (+)NCBIHuRef
CHM1_1143,941,085 - 43,945,333 (+)NCBICHM1_1
T2T-CHM13v2.0143,229,529 - 43,233,751 (+)NCBIT2T-CHM13v2.0
Cdc20
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394118,290,098 - 118,294,540 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4118,290,098 - 118,294,549 (-)EnsemblGRCm39 Ensembl
GRCm384118,432,901 - 118,437,343 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4118,432,901 - 118,437,352 (-)EnsemblGRCm38mm10GRCm38
MGSCv374118,105,506 - 118,109,948 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364117,930,833 - 117,935,181 (-)NCBIMGSCv36mm8
Celera4117,158,439 - 117,162,881 (-)NCBICelera
Cytogenetic Map4D2.1NCBI
cM Map454.61NCBI
Cdc20
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85137,251,596 - 137,255,799 (-)NCBIGRCr8
mRatBN7.25131,966,203 - 131,970,406 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5131,966,215 - 131,970,512 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5134,673,439 - 134,677,645 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05136,428,076 - 136,432,282 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05136,450,474 - 136,454,680 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05137,260,728 - 137,264,931 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5137,260,739 - 137,265,015 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05141,050,192 - 141,054,395 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45138,913,180 - 138,916,744 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15138,918,405 - 138,921,970 (-)NCBI
Celera5130,511,685 - 130,515,888 (-)NCBICelera
Cytogenetic Map5q36NCBI
Cdc20
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555372,941,265 - 2,945,158 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555372,941,265 - 2,945,158 (+)NCBIChiLan1.0ChiLan1.0
CDC20
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21183,446,843 - 183,454,742 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11182,588,226 - 182,592,803 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0142,660,338 - 42,664,618 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1144,039,971 - 44,044,497 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl144,039,971 - 44,044,497 (+)Ensemblpanpan1.1panPan2
CDC20
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11516,803,204 - 16,806,935 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1516,803,204 - 16,806,919 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1516,930,216 - 16,933,933 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01516,969,931 - 16,973,648 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1516,969,932 - 16,981,515 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11516,762,404 - 16,766,121 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01516,831,404 - 16,835,121 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01516,904,979 - 16,908,696 (-)NCBIUU_Cfam_GSD_1.0
Cdc20
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505858,928,248 - 58,940,284 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647424,760,298 - 24,767,725 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647424,760,258 - 24,765,069 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CDC20
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6167,886,270 - 167,890,583 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16167,886,266 - 167,890,587 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26155,341,127 - 155,345,061 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CDC20
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12089,449,008 - 89,453,263 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2089,444,165 - 89,453,044 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603327,468,097 - 27,472,613 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000008907   ⟹   ENSHGLP00000008812
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248922,675,754 - 2,679,793 (+)Ensembl
RefSeq Acc Id: XM_021249929   ⟹   XP_021105588
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248922,675,980 - 2,679,709 (+)NCBI
Protein Sequences
Protein RefSeqs XP_021105588 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHA99271 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000008812
  ENSHGLP00100022640
GenBank Protein JAN98546 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_021105588   ⟸   XM_021249929
- UniProtKB: G5AQG1 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000008812   ⟸   ENSHGLT00000008907


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000006336 Ensembl, ENTREZGENE
  ENSHGLG00100016645 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000008907 ENTREZGENE
  ENSHGLT00100022875 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/TrEMBL
InterPro Apc4_WD40_dom UniProtKB/TrEMBL
  Cdc20/Fizzy UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/TrEMBL
  WD40_repeat UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/TrEMBL
KEGG Report hgl:101707229 UniProtKB/TrEMBL
NCBI Gene Cdc20 ENTREZGENE
PANTHER CELL DIVISION CYCLE PROTEIN 20 HOMOLOG UniProtKB/TrEMBL
  PTHR19918 UniProtKB/TrEMBL
Pfam ANAPC4_WD40 UniProtKB/TrEMBL
  WD40 UniProtKB/TrEMBL
PROSITE WD_REPEATS_2 UniProtKB/TrEMBL
  WD_REPEATS_REGION UniProtKB/TrEMBL
SMART WD40 UniProtKB/TrEMBL
Superfamily-SCOP SSF50978 UniProtKB/TrEMBL
UniProt G5AQG1 ENTREZGENE, UniProtKB/TrEMBL