Symbol: |
Spmap1 (Ensembl: C17orf98) |
Name: |
sperm microtubule associated protein 1 (Ensembl:chromosome unknown C17orf98 homolog) |
RGD ID: |
18906060 |
Description: |
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Type: |
protein-coding
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RefSeq Status: |
MODEL |
Previously known as: |
chromosome unknown C17orf98 homolog; CUNH17orf98; uncharacterized protein C17orf98 homolog |
RGD Orthologs |
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Alliance Genes |
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More Info |
more info ...
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More Info |
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Latest Assembly: |
HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly |
Position: |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Additional References at PubMed
Genomics
Comparative Map Data
Spmap1 (Heterocephalus glaber - naked mole-rat) |
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SPMAP1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 17 | 38,835,086 - 38,841,438 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 17 | 38,835,086 - 38,841,438 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 17 | 36,991,339 - 36,997,691 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 17 | 34,244,867 - 34,251,168 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 17 | 33,652,304 - 33,658,595 (-) | NCBI | | Celera | | | Cytogenetic Map | 17 | q12 | NCBI | | | | | HuRef | 17 | 32,786,526 - 32,792,792 (-) | NCBI | | HuRef | | | CHM1_1 | 17 | 37,226,653 - 37,232,941 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 17 | 39,698,166 - 39,704,496 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Spmap1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 11 | 97,662,307 - 97,666,744 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 97,662,307 - 97,666,744 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 97,771,481 - 97,775,918 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 97,771,481 - 97,775,918 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 11 | 97,632,795 - 97,637,232 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 11 | 97,587,572 - 97,592,008 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 11 | 107,421,004 - 107,425,441 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | D | NCBI | | | | | cM Map | 11 | 61.1 | NCBI | | | | |
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Spmap1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 10 | 83,260,797 - 83,265,029 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 10 | 82,763,969 - 82,768,587 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 10 | 82,764,438 - 82,768,039 (-) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 10 | 85,713,161 - 85,717,801 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 10 | 85,713,640 - 85,717,511 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 10 | 85,503,679 - 85,507,298 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 10 | 86,519,984 - 86,523,409 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 10 | 81,519,387 - 81,524,027 (-) | NCBI | | Celera | | | Cytogenetic Map | 10 | q31 | NCBI | | | | |
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Spmap1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955451 | 13,888,304 - 13,891,524 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955451 | 13,888,362 - 13,891,524 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SPMAP1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 19 | 26,106,947 - 26,114,234 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 17 | 27,990,519 - 27,997,809 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 17 | 18,429,897 - 18,436,366 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 17 | 18,703,772 - 18,711,133 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 17 | 18,703,772 - 18,711,133 (+) | Ensembl | panpan1.1 | | panPan2 | |
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SPMAP1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 9 | 23,405,851 - 23,409,427 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 9 | 23,406,199 - 23,409,427 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 9 | 22,877,953 - 22,881,255 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 9 | 24,200,954 - 24,204,245 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 9 | 24,201,034 - 24,204,252 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 9 | 22,973,305 - 22,976,604 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 9 | 23,233,959 - 23,237,253 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 9 | 23,359,854 - 23,363,162 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Spmap1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405602 | 22,836,944 - 22,839,701 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936490 | 14,235,540 - 14,238,119 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936490 | 14,235,540 - 14,238,493 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SPMAP1 (Sus scrofa - pig) |
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SPMAP1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 16 | 67,351,569 - 67,363,380 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 16 | 67,351,683 - 67,363,277 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666077 | 38,339,015 - 38,353,698 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Expression
Sequence
RefSeq Acc Id: |
ENSHGLT00000020086 ⟹ ENSHGLP00000019887 |
Type: |
CODING |
Position: |
Naked Mole-Rat Assembly | Chr | Position (strand) | Source |
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HetGla_female_1.0 Ensembl | NW_004624795 | 3,882,511 - 3,885,312 (+) | Ensembl |
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RefSeq Acc Id: |
XM_004859531 ⟹ XP_004859588 |
Type: |
CODING |
Position: |
Naked Mole-Rat Assembly | Chr | Position (strand) | Source |
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HetGla 1.0 | NW_004624795 | 3,882,785 - 3,885,320 (+) | NCBI |
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RefSeq Acc Id: |
XP_004859588 ⟸ XM_004859531 |
- UniProtKB: |
G5BK66 (UniProtKB/TrEMBL) |
RefSeq Acc Id: |
ENSHGLP00000019887 ⟸ ENSHGLT00000020086 |
Additional Information
Nomenclature History
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2023-05-02 |
Spmap1 |
sperm microtubule associated protein 1 |
CUNH17orf98 |
chromosome unknown C17orf98 homolog |
Symbol and/or name change |
5135510 |
APPROVED |
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