Nus1 (NUS1 dehydrodolichyl diphosphate synthase subunit) - Rat Genome Database

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Gene: Nus1 (NUS1 dehydrodolichyl diphosphate synthase subunit) Heterocephalus glaber
Analyze
Symbol: Nus1
Name: NUS1 dehydrodolichyl diphosphate synthase subunit
RGD ID: 18905456
Description: ENCODES a protein that exhibits dehydrodolichyl diphosphate synthase activity (ortholog); prenyltransferase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); dolichol biosynthetic process (ortholog); dolichyl diphosphate biosynthetic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 55 (ortholog); FOUND IN dehydrodolichyl diphosphate synthase complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: dehydrodolichyl diphosphate synthase complex subunit NUS1; Nogo-B receptor; nuclear undecaprenyl pyrophosphate synthase 1 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479812,130,569 - 12,154,314 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479812,132,570 - 12,154,252 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:30032202  


Genomics

Comparative Map Data
Nus1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479812,130,569 - 12,154,314 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479812,132,570 - 12,154,252 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
NUS1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386117,675,469 - 117,710,727 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6117,675,469 - 117,710,727 (+)EnsemblGRCh38hg38GRCh38
GRCh376117,996,632 - 118,031,890 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 366118,103,310 - 118,138,583 (+)NCBINCBI36Build 36hg18NCBI36
Build 346118,103,362 - 118,136,441NCBI
Celera6118,739,521 - 118,774,823 (+)NCBICelera
Cytogenetic Map6q22.1NCBI
HuRef6115,577,729 - 115,612,992 (+)NCBIHuRef
CHM1_16118,260,511 - 118,295,775 (+)NCBICHM1_1
T2T-CHM13v2.06118,859,707 - 118,894,963 (+)NCBIT2T-CHM13v2.0
Nus1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391052,293,643 - 52,316,288 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1052,293,643 - 52,316,279 (+)EnsemblGRCm39 Ensembl
GRCm381052,417,547 - 52,440,192 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1052,417,547 - 52,440,183 (+)EnsemblGRCm38mm10GRCm38
MGSCv371052,137,353 - 52,159,998 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361052,106,015 - 52,125,181 (+)NCBIMGSCv36mm8
Celera1053,256,151 - 53,278,472 (+)NCBICelera
Cytogenetic Map10B3NCBI
cM Map1026.64NCBI
Nus1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82032,354,519 - 32,381,265 (+)NCBIGRCr8
mRatBN7.22031,811,817 - 31,838,562 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2031,811,817 - 31,838,561 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2032,816,930 - 32,844,014 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02032,207,839 - 32,234,926 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02032,937,789 - 32,964,535 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02033,557,052 - 33,584,011 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2033,557,052 - 33,584,010 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02035,336,831 - 35,363,790 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42031,143,886 - 31,170,668 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12031,144,058 - 31,181,953 (+)NCBI
Celera2033,209,636 - 33,236,417 (+)NCBICelera
Cytogenetic Map20q11NCBI
Nus1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955436825,387 - 850,558 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955436825,387 - 850,558 (+)NCBIChiLan1.0ChiLan1.0
NUS1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25137,691,995 - 137,726,079 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16135,585,206 - 135,619,090 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06115,486,422 - 115,521,317 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16119,626,895 - 119,661,552 (+)NCBIpanpan1.1PanPan1.1panPan2
NUS1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1157,866,760 - 57,895,505 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl157,866,879 - 57,893,077 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha158,669,766 - 58,698,455 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0158,050,809 - 58,079,510 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl158,050,871 - 58,079,506 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1157,952,148 - 57,980,842 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0157,793,092 - 57,821,772 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0158,424,589 - 58,453,383 (+)NCBIUU_Cfam_GSD_1.0
Nus1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946108,588,710 - 108,612,028 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936658695,609 - 718,746 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936658695,431 - 718,891 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NUS1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl144,156,778 - 44,186,194 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1144,156,771 - 44,186,224 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2149,503,144 - 49,532,778 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NUS1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11356,115,581 - 56,147,918 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1356,113,428 - 56,147,982 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604028,444,435 - 28,478,805 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000005114   ⟹   ENSHGLP00000005048
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462479812,130,569 - 12,154,314 (-)Ensembl
RefSeq Acc Id: XM_004860165   ⟹   XP_004860222
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479812,132,570 - 12,154,252 (-)NCBI
RefSeq Acc Id: XM_021240646   ⟹   XP_021096305
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479812,132,570 - 12,154,252 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004860222 (Get FASTA)   NCBI Sequence Viewer  
  XP_021096305 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB06658 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000005048
Reference Protein Sequences
RefSeq Acc Id: XP_021096305   ⟸   XM_021240646
- Peptide Label: isoform X2
RefSeq Acc Id: XP_004860222   ⟸   XM_004860165
- Peptide Label: isoform X1
RefSeq Acc Id: ENSHGLP00000005048   ⟸   ENSHGLT00000005114


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000003701 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000005114 ENTREZGENE
NCBI Gene Nus1 ENTREZGENE