Faxc (failed axon connections homolog, metaxin like GST domain containing) - Rat Genome Database

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Gene: Faxc (failed axon connections homolog, metaxin like GST domain containing) Heterocephalus glaber
Analyze
Symbol: Faxc
Name: failed axon connections homolog, metaxin like GST domain containing
RGD ID: 18905368
Description: ASSOCIATED WITH genetic disease (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: failed axon connections homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248105,700,087 - 5,773,484 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248105,699,612 - 5,773,816 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Faxc
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248105,700,087 - 5,773,484 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248105,699,612 - 5,773,816 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
FAXC
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38699,271,161 - 99,350,056 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl699,271,168 - 99,350,062 (-)EnsemblGRCh38hg38GRCh38
GRCh37699,719,037 - 99,797,932 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36699,835,257 - 99,904,252 (-)NCBINCBI36Build 36hg18NCBI36
Build 34699,835,257 - 99,904,252NCBI
Celera6100,364,951 - 100,441,701 (-)NCBICelera
Cytogenetic Map6q16.2NCBI
HuRef697,160,917 - 97,237,940 (-)NCBIHuRef
CHM1_1699,983,861 - 100,060,596 (-)NCBICHM1_1
T2T-CHM13v2.06100,445,536 - 100,524,422 (-)NCBIT2T-CHM13v2.0
Faxc
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39421,930,906 - 22,001,461 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl421,931,329 - 21,996,839 (+)EnsemblGRCm39 Ensembl
GRCm38421,930,906 - 22,001,461 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl421,931,329 - 21,996,839 (+)EnsemblGRCm38mm10GRCm38
MGSCv37421,858,473 - 21,928,608 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36422,022,168 - 22,041,724 (+)NCBIMGSCv36mm8
Celera421,684,171 - 21,753,905 (+)NCBICelera
Cytogenetic Map4A3NCBI
cM Map49.2NCBI
Faxc
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8540,277,167 - 40,336,503 (+)NCBIGRCr8
mRatBN7.2535,480,137 - 35,539,741 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl535,480,402 - 35,544,446 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx537,604,846 - 37,665,224 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0539,197,570 - 39,257,948 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0539,137,078 - 39,197,452 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0536,076,565 - 36,135,884 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl536,076,565 - 36,135,884 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0540,729,199 - 40,795,856 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4536,677,691 - 36,737,527 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera534,493,714 - 34,553,101 (+)NCBICelera
Cytogenetic Map5q21NCBI
Faxc
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541125,154,311 - 25,220,334 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541125,154,311 - 25,220,334 (-)NCBIChiLan1.0ChiLan1.0
FAXC
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25119,319,173 - 119,396,464 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16117,200,253 - 117,277,721 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0697,113,378 - 97,190,850 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16100,996,013 - 101,072,924 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6101,004,265 - 101,072,924 (-)Ensemblpanpan1.1panPan2
FAXC
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11257,493,062 - 57,571,489 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1257,501,170 - 57,570,563 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1257,251,342 - 57,329,397 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01258,314,401 - 58,392,753 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1258,322,504 - 58,391,886 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11257,673,975 - 57,752,343 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01257,524,232 - 57,596,260 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01257,769,177 - 57,841,438 (-)NCBIUU_Cfam_GSD_1.0
Faxc
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494692,439,355 - 92,509,728 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936651902,301 - 964,447 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936651900,932 - 965,188 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FAXC
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11374,525,175 - 74,596,948 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1374,525,691 - 74,594,703 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604046,856,937 - 46,932,497 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000000633   ⟹   ENSHGLP00000000594
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248105,700,087 - 5,773,484 (+)Ensembl
RefSeq Acc Id: XM_004862492   ⟹   XP_004862549
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248105,700,407 - 5,773,816 (+)NCBI
RefSeq Acc Id: XM_004862493   ⟹   XP_004862550
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248105,699,612 - 5,773,330 (+)NCBI
RefSeq Acc Id: XM_021242677   ⟹   XP_021098336
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248105,699,909 - 5,773,330 (+)NCBI
RefSeq Acc Id: XM_021242678   ⟹   XP_021098337
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248105,706,077 - 5,773,330 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004862549 (Get FASTA)   NCBI Sequence Viewer  
  XP_004862550 (Get FASTA)   NCBI Sequence Viewer  
  XP_021098336 (Get FASTA)   NCBI Sequence Viewer  
  XP_021098337 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000000594
Reference Protein Sequences
RefSeq Acc Id: XP_004862550   ⟸   XM_004862493
- Peptide Label: isoform X2
- UniProtKB: G5BJN8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021098336   ⟸   XM_021242677
- Peptide Label: isoform X3
- UniProtKB: G5BJN8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004862549   ⟸   XM_004862492
- Peptide Label: isoform X1
- UniProtKB: G5BJN8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021098337   ⟸   XM_021242678
- Peptide Label: isoform X4
RefSeq Acc Id: ENSHGLP00000000594   ⟸   ENSHGLT00000000633


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000000521 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000000633 ENTREZGENE
InterPro FAX/IsoI-like UniProtKB/TrEMBL
  FAXC_N UniProtKB/TrEMBL
  Glutathione-S-Trfase_C_sf UniProtKB/TrEMBL
  Glutathione_S-Trfase UniProtKB/TrEMBL
  Metaxin_GST UniProtKB/TrEMBL
  Thioredoxin-like_fold UniProtKB/TrEMBL
  Thioredoxin-like_sf UniProtKB/TrEMBL
NCBI Gene Faxc ENTREZGENE
PANTHER FAILED AXON CONNECTIONS HOMOLOG UniProtKB/TrEMBL
  METAXIN RELATED UniProtKB/TrEMBL
Pfam FAXC_N UniProtKB/TrEMBL
  GST_C_6 UniProtKB/TrEMBL
  GST_N_4 UniProtKB/TrEMBL
Superfamily-SCOP GST C-terminal domain-like UniProtKB/TrEMBL
  Thioredoxin-like UniProtKB/TrEMBL
UniProt G5BJN8 ENTREZGENE, UniProtKB/TrEMBL