Mei1 (meiotic double-stranded break formation protein 1) - Rat Genome Database

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Gene: Mei1 (meiotic double-stranded break formation protein 1) Heterocephalus glaber
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Symbol: Mei1
Name: meiotic double-stranded break formation protein 1
RGD ID: 18904306
Description: INVOLVED IN gamete generation (ortholog); male meiosis I (ortholog); meiotic cell cycle (ortholog); ASSOCIATED WITH adenylosuccinase lyase deficiency (ortholog); common variable immunodeficiency 4 (ortholog); Hydatidiform Mole, Recurrent, 3 (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: meiosis inhibitor 1; meiosis inhibitor protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247526,885,606 - 6,958,109 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Mei1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247526,885,606 - 6,958,109 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
MEI1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382241,699,503 - 41,799,454 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2241,699,503 - 41,799,456 (+)EnsemblGRCh38hg38GRCh38
GRCh372242,095,507 - 42,195,458 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362240,425,464 - 40,525,405 (+)NCBINCBI36Build 36hg18NCBI36
Celera2225,901,954 - 26,001,526 (+)NCBICelera
Cytogenetic Map22q13.2NCBI
HuRef2225,060,925 - 25,161,012 (+)NCBIHuRef
CHM1_12242,055,530 - 42,155,488 (+)NCBICHM1_1
T2T-CHM13v2.02242,178,481 - 42,278,060 (+)NCBIT2T-CHM13v2.0
Mei1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391581,954,275 - 82,011,018 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1581,954,197 - 82,011,015 (+)EnsemblGRCm39 Ensembl
GRCm381582,070,074 - 82,126,817 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1582,069,996 - 82,126,814 (+)EnsemblGRCm38mm10GRCm38
MGSCv371581,900,547 - 81,957,244 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361581,909,719 - 81,954,069 (+)NCBIMGSCv36mm8
Celera1584,191,762 - 84,250,059 (+)NCBICelera
Cytogenetic Map15E1NCBI
cM Map1538.41NCBI
Mei1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87115,470,256 - 115,523,618 (+)NCBIGRCr8
mRatBN7.27113,590,142 - 113,643,513 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7113,590,142 - 113,643,511 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7115,346,643 - 115,400,118 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07117,570,143 - 117,623,621 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07117,539,585 - 117,593,062 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07123,308,041 - 123,361,391 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7123,308,041 - 123,361,391 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07123,291,487 - 123,344,883 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47120,449,414 - 120,502,820 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17120,483,677 - 120,536,901 (+)NCBI
Celera7109,905,530 - 109,958,828 (+)NCBICelera
Cytogenetic Map7q34NCBI
Mei1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495541327,188,013 - 27,247,608 (+)NCBIChiLan1.0ChiLan1.0
MEI1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22351,518,817 - 51,629,473 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12254,218,136 - 54,328,797 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02222,592,508 - 22,692,370 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12240,678,001 - 40,777,076 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2240,678,001 - 40,777,076 (+)Ensemblpanpan1.1panPan2
MEI1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11023,533,749 - 23,606,875 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1023,518,214 - 23,606,816 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1023,467,132 - 23,539,980 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01024,278,584 - 24,351,864 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1024,278,593 - 24,351,805 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11023,995,624 - 24,068,791 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01024,316,292 - 24,389,581 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01024,490,927 - 24,564,058 (-)NCBIUU_Cfam_GSD_1.0
Mei1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049457,186,508 - 7,266,638 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936492197,076 - 276,726 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936492196,829 - 277,052 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MEI1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl56,800,961 - 6,871,625 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.156,785,957 - 6,870,599 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.254,235,773 - 4,241,592 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MEI1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11924,233,516 - 24,331,176 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1924,231,807 - 24,331,022 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666045101,081,054 - 101,179,212 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_004845504   ⟹   XP_004845561
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247526,885,611 - 6,957,723 (-)NCBI
RefSeq Acc Id: XM_021258915   ⟹   XP_021114574
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247526,885,611 - 6,957,766 (-)NCBI
RefSeq Acc Id: XM_021258916   ⟹   XP_021114575
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247526,885,606 - 6,958,109 (-)NCBI
RefSeq Acc Id: XM_021258917   ⟹   XP_021114576
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247526,885,610 - 6,957,766 (-)NCBI
RefSeq Acc Id: XM_021258918   ⟹   XP_021114577
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247526,885,606 - 6,957,534 (-)NCBI
RefSeq Acc Id: XM_021258919   ⟹   XP_021114578
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247526,885,610 - 6,957,766 (-)NCBI
RefSeq Acc Id: XM_021258920   ⟹   XP_021114579
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247526,885,606 - 6,954,450 (-)NCBI
RefSeq Acc Id: XM_021258921   ⟹   XP_021114580
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247526,885,612 - 6,957,766 (-)NCBI
RefSeq Acc Id: XM_021258922   ⟹   XP_021114581
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247526,885,606 - 6,953,372 (-)NCBI
RefSeq Acc Id: XP_021114575   ⟸   XM_021258916
- Peptide Label: isoform X2
- UniProtKB: A0AAX6T199 (UniProtKB/TrEMBL),   G5BPQ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021114577   ⟸   XM_021258918
- Peptide Label: isoform X5
- UniProtKB: A0AAX6T3P5 (UniProtKB/TrEMBL),   G5BPQ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021114579   ⟸   XM_021258920
- Peptide Label: isoform X7
- UniProtKB: A0AAX6SZT2 (UniProtKB/TrEMBL),   G5BPQ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021114581   ⟸   XM_021258922
- Peptide Label: isoform X9
- UniProtKB: A0AAX6SZG4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021114578   ⟸   XM_021258919
- Peptide Label: isoform X6
- UniProtKB: A0AAX6T226 (UniProtKB/TrEMBL),   G5BPQ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021114576   ⟸   XM_021258917
- Peptide Label: isoform X4
- UniProtKB: A0AAX6T1V7 (UniProtKB/TrEMBL),   G5BPQ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021114574   ⟸   XM_021258915
- Peptide Label: isoform X1
- UniProtKB: A0AAX6T145 (UniProtKB/TrEMBL),   G5BPQ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004845561   ⟸   XM_004845504
- Peptide Label: isoform X3
- UniProtKB: A0AAX6P7L8 (UniProtKB/TrEMBL),   G5BPQ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021114580   ⟸   XM_021258921
- Peptide Label: isoform X8
- UniProtKB: A0AAX6T3W0 (UniProtKB/TrEMBL),   G5BPQ3 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Gene3D-CATH Leucine-rich Repeat Variant UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  Immune_Signaling-Apoptosis_Reg UniProtKB/TrEMBL
NCBI Gene Mei1 ENTREZGENE
PANTHER BCL2 INTERACTING MEDIATOR OF CELL DEATH UniProtKB/TrEMBL
  MEIOSIS INHIBITOR PROTEIN 1 UniProtKB/TrEMBL
Superfamily-SCOP ARM repeat UniProtKB/TrEMBL
UniProt A0AAX6P7L8 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6SZG4 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6SZT2 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6T145 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6T199 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6T1V7 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6T226 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6T3P5 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6T3W0 ENTREZGENE, UniProtKB/TrEMBL
  G5BPQ3 ENTREZGENE, UniProtKB/TrEMBL