Jund (JunD proto-oncogene, AP-1 transcription factor subunit) - Rat Genome Database

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Gene: Jund (JunD proto-oncogene, AP-1 transcription factor subunit) Heterocephalus glaber
Analyze
Symbol: Jund
Name: JunD proto-oncogene, AP-1 transcription factor subunit
RGD ID: 18903888
Description: ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to fatty acid (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); cardiomyopathy (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: transcription factor jun-D
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249081,573,174 - 1,574,113 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249081,572,628 - 1,574,205 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Jund
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249081,573,174 - 1,574,113 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249081,572,628 - 1,574,205 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JUND
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381918,279,694 - 18,281,622 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1918,279,694 - 18,281,622 (-)EnsemblGRCh38hg38GRCh38
GRCh371918,390,504 - 18,392,432 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361918,251,570 - 18,253,432 (-)NCBINCBI36Build 36hg18NCBI36
Build 341918,251,569 - 18,253,468NCBI
Celera1918,292,287 - 18,294,173 (-)NCBICelera
Cytogenetic Map19p13.11NCBI
HuRef1917,954,230 - 17,965,959 (-)NCBIHuRef
CHM1_11918,390,809 - 18,392,678 (-)NCBICHM1_1
T2T-CHM13v2.01918,413,794 - 18,415,722 (-)NCBIT2T-CHM13v2.0
Jund
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39871,150,389 - 71,153,265 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl871,151,599 - 71,153,265 (+)EnsemblGRCm39 Ensembl
GRCm38870,697,739 - 70,700,616 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl870,698,949 - 70,700,616 (+)EnsemblGRCm38mm10GRCm38
MGSCv37873,221,638 - 73,224,515 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36873,627,938 - 73,629,605 (+)NCBIMGSCv36mm8
Celera873,254,240 - 73,257,113 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
cM Map834.15NCBI
Jund
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81618,768,093 - 18,769,771 (-)NCBIGRCr8
mRatBN7.21618,734,121 - 18,735,799 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1618,734,122 - 18,735,799 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1618,775,785 - 18,777,473 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01619,908,865 - 19,910,549 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01618,828,735 - 18,830,423 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01620,485,028 - 20,486,707 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1620,485,029 - 20,486,707 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01620,342,096 - 20,343,775 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41619,239,694 - 19,241,529 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11619,239,692 - 19,241,527 (-)NCBI
Celera1618,926,295 - 18,927,907 (-)NCBICelera
Cytogenetic Map16p14NCBI
Jund
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555243,176,849 - 3,177,936 (+)NCBIChiLan1.0ChiLan1.0
JUND
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22023,137,209 - 23,139,083 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11922,145,537 - 22,147,409 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01917,755,331 - 17,757,164 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11918,728,466 - 18,729,502 (-)NCBIpanpan1.1PanPan1.1panPan2
JUND
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12044,737,021 - 44,738,932 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2044,736,832 - 44,763,020 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2044,651,244 - 44,653,089 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02045,222,928 - 45,224,778 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2045,222,673 - 45,224,061 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12044,460,059 - 44,461,903 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02044,870,705 - 44,872,544 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02045,145,944 - 45,147,789 (+)NCBIUU_Cfam_GSD_1.0
JUND
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1259,530,991 - 59,532,846 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JUND
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1616,754,553 - 16,756,458 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl616,755,247 - 16,756,290 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660742,598,780 - 2,600,647 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021251035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01102732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSHGLT00000003510   ⟹   ENSHGLP00000003455
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046249081,573,174 - 1,574,113 (-)Ensembl
RefSeq Acc Id: XM_021251035   ⟹   XP_021106694
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249081,572,628 - 1,574,205 (-)NCBI
Protein Sequences
Protein RefSeqs XP_021106694 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_021106694   ⟸   XM_021251035
Ensembl Acc Id: ENSHGLP00000003455   ⟸   ENSHGLT00000003510


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000002554 Ensembl
NCBI Gene Jund ENTREZGENE