Mal2 (mal, T cell differentiation protein 2) - Rat Genome Database

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Gene: Mal2 (mal, T cell differentiation protein 2) Heterocephalus glaber
Analyze
Symbol: Mal2
Name: mal, T cell differentiation protein 2
RGD ID: 18902619
Description: ASSOCIATED WITH genetic disease (ortholog); hereditary multiple exostoses (ortholog); trichorhinophalangeal syndrome type I (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); membrane raft (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: protein MAL2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476317,420,939 - 17,447,162 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476317,421,000 - 17,446,653 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Mal2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476317,420,939 - 17,447,162 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476317,421,000 - 17,446,653 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
MAL2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388119,208,363 - 119,245,673 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8119,165,034 - 119,245,673 (+)EnsemblGRCh38hg38GRCh38
GRCh378120,220,602 - 120,257,913 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 368120,289,791 - 120,327,094 (+)NCBINCBI36Build 36hg18NCBI36
Build 348120,289,813 - 120,327,092NCBI
Celera8116,410,022 - 116,447,299 (+)NCBICelera
Cytogenetic Map8q24.12NCBI
HuRef8115,541,181 - 115,578,458 (+)NCBIHuRef
CHM1_18120,261,638 - 120,298,914 (+)NCBICHM1_1
T2T-CHM13v2.08120,336,831 - 120,374,123 (+)NCBIT2T-CHM13v2.0
Mal2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391554,434,762 - 54,466,242 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1554,434,588 - 54,466,243 (+)EnsemblGRCm39 Ensembl
GRCm381554,571,366 - 54,602,846 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1554,571,192 - 54,602,847 (+)EnsemblGRCm38mm10GRCm38
MGSCv371554,402,921 - 54,434,401 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361554,401,568 - 54,432,921 (+)NCBIMGSCv36mm8
Celera1556,118,158 - 56,149,419 (+)NCBICelera
Cytogenetic Map15D1NCBI
cM Map1521.37NCBI
Mal2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8787,790,239 - 87,823,219 (+)NCBIGRCr8
mRatBN7.2785,900,453 - 85,933,433 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl785,900,453 - 85,933,429 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx787,807,586 - 87,840,648 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0790,008,790 - 90,041,854 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0789,814,263 - 89,847,331 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0794,130,852 - 94,163,649 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl794,130,852 - 94,163,645 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0794,768,727 - 94,801,524 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4790,945,459 - 90,978,439 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1790,997,672 - 91,010,639 (+)NCBI
Celera782,723,384 - 82,756,315 (+)NCBICelera
Cytogenetic Map7q32NCBI
Mal2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495541725,069,847 - 25,096,132 (+)NCBIChiLan1.0ChiLan1.0
MAL2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27136,629,657 - 136,670,179 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18112,142,129 - 112,182,632 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08115,894,617 - 115,935,359 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18118,413,406 - 118,452,972 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8118,413,391 - 118,452,972 (+)Ensemblpanpan1.1panPan2
MAL2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11318,404,979 - 18,422,076 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1318,406,633 - 18,420,469 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1318,403,036 - 18,427,730 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01318,724,583 - 18,749,279 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1318,724,591 - 18,751,885 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11318,452,434 - 18,477,116 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01318,551,113 - 18,575,808 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01318,782,261 - 18,806,942 (+)NCBIUU_Cfam_GSD_1.0
Mal2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530319,889,255 - 19,914,694 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647027,315,287 - 27,340,799 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647027,315,356 - 27,390,078 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAL2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl419,593,536 - 19,617,671 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1419,593,536 - 19,658,695 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2420,613,479 - 20,678,729 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MAL2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18113,800,325 - 113,830,578 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl8113,800,358 - 113,832,534 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603926,463,591 - 26,499,759 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004850210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01044341 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSHGLT00000006743   ⟹   ENSHGLP00000006661
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462476317,420,939 - 17,447,162 (+)Ensembl
RefSeq Acc Id: XM_004850210   ⟹   XP_004850267
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462476317,421,000 - 17,446,653 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004850267 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000006661
RefSeq Acc Id: XP_004850267   ⟸   XM_004850210
RefSeq Acc Id: ENSHGLP00000006661   ⟸   ENSHGLT00000006743


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000004865 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000006743 ENTREZGENE
NCBI Gene Mal2 ENTREZGENE