Gpr62 (G protein-coupled receptor 62) - Rat Genome Database

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Gene: Gpr62 (G protein-coupled receptor 62) Heterocephalus glaber
Analyze
Symbol: Gpr62
Name: G protein-coupled receptor 62
RGD ID: 18902494
Description: ENCODES a protein that exhibits arrestin family protein binding (inferred); G protein-coupled receptor activity (inferred); identical protein binding (inferred); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (inferred); G protein-coupled receptor signaling pathway (inferred); ligand-independent adenylate cyclase-activating G protein-coupled receptor signaling pathway (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN endosome (inferred); membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: probable G-protein coupled receptor 62; Putative G-protein coupled receptor 62
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247305,775,020 - 5,776,102 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247305,774,461 - 5,776,591 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Gpr62
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247305,775,020 - 5,776,102 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247305,774,461 - 5,776,591 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
GPR62
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38351,955,381 - 51,957,499 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl351,955,381 - 51,957,499 (+)EnsemblGRCh38hg38GRCh38
GRCh37351,989,397 - 51,991,515 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36351,964,370 - 51,966,560 (+)NCBINCBI36Build 36hg18NCBI36
Build 34351,964,436 - 51,966,559NCBI
Celera351,968,157 - 51,970,347 (+)NCBICelera
Cytogenetic Map3p21.2NCBI
HuRef352,052,668 - 52,054,858 (+)NCBIHuRef
CHM1_1351,942,017 - 51,944,207 (+)NCBICHM1_1
T2T-CHM13v2.0351,988,300 - 51,990,418 (+)NCBIT2T-CHM13v2.0
Gpr62
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399106,341,161 - 106,343,184 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9106,341,161 - 106,343,137 (-)EnsemblGRCm39 Ensembl
GRCm389106,463,962 - 106,465,985 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9106,463,962 - 106,465,938 (-)EnsemblGRCm38mm10GRCm38
MGSCv379106,366,291 - 106,368,271 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Celera9106,090,861 - 106,092,863 (-)NCBICelera
Cytogenetic Map9F1NCBI
cM Map957.56NCBI
Gpr62
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88115,981,936 - 115,984,022 (-)NCBIGRCr8
mRatBN7.28107,103,225 - 107,105,311 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8107,103,980 - 107,105,056 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8112,726,192 - 112,728,276 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08110,925,368 - 110,927,452 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08108,768,150 - 108,770,234 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08115,165,655 - 115,170,396 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8115,166,410 - 115,167,486 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08114,530,370 - 114,532,328 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48111,608,094 - 111,609,768 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera8106,415,136 - 106,419,877 (-)NCBICelera
Cytogenetic Map8q32NCBI
Gpr62
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555323,602,642 - 3,603,230 (+)NCBIChiLan1.0ChiLan1.0
GPR62
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2251,943,356 - 51,951,724 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1351,949,762 - 51,956,476 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0351,894,429 - 51,898,907 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1353,124,767 - 53,127,498 (+)NCBIpanpan1.1PanPan1.1panPan2
GPR62
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12037,759,025 - 37,761,826 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2037,759,803 - 37,760,897 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2037,740,478 - 37,742,688 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02038,109,593 - 38,111,803 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2038,110,362 - 38,111,456 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12037,473,198 - 37,475,408 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02037,881,956 - 37,884,163 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02038,166,823 - 38,169,034 (-)NCBIUU_Cfam_GSD_1.0
Gpr62
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560266,541,527 - 66,543,722 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365293,302,380 - 3,303,471 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365293,301,400 - 3,304,413 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPR62
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1334,088,198 - 34,089,289 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11334,083,913 - 34,090,065 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21337,282,337 - 37,289,579 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GPR62
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12213,323,936 - 13,326,119 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666041153,609,057 - 153,611,207 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000029005   ⟹   ENSHGLP00000028513
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247305,775,020 - 5,776,102 (+)Ensembl
RefSeq Acc Id: XM_004921032   ⟹   XP_004921089
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247305,774,461 - 5,776,591 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004921089 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB01797 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000028513
  ENSHGLP00100027620
Reference Protein Sequences
RefSeq Acc Id: XP_004921089   ⟸   XM_004921032
- UniProtKB: G5AXN6 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000028513   ⟸   ENSHGLT00000029005


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000020795 Ensembl, ENTREZGENE
  ENSHGLG00100020732 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000029005 ENTREZGENE
  ENSHGLT00100028089 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
KEGG Report hgl:101726543 UniProtKB/TrEMBL
NCBI Gene Gpr62 ENTREZGENE
PANTHER G PROTEIN-COUPLED RECEPTOR UniProtKB/TrEMBL
  G-PROTEIN COUPLED RECEPTOR 62 UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt G5AXN6 ENTREZGENE, UniProtKB/TrEMBL