CUNH2orf88 (chromosome unknown C2orf88 homolog) - Rat Genome Database

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Gene: CUNH2orf88 (chromosome unknown C2orf88 homolog) Heterocephalus glaber
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Symbol: CUNH2orf88
Name: chromosome unknown C2orf88 homolog
RGD ID: 18902270
Description: ENCODES a protein that exhibits protein kinase A regulatory subunit binding (inferred); ASSOCIATED WITH immunodeficiency 31B (ortholog); juvenile rheumatoid arthritis (ortholog); myostatin-related muscle hypertrophy (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: small membrane A-kinase anchor protein
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248545,770,852 - 5,846,616 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
CUNH2orf88
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248545,770,852 - 5,846,616 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
C2orf88
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382189,879,562 - 190,203,484 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2189,879,609 - 190,203,484 (+)EnsemblGRCh38hg38GRCh38
GRCh372191,002,503 - 191,068,210 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362190,710,731 - 190,776,455 (+)NCBINCBI36Build 36hg18NCBI36
Celera2184,597,431 - 184,663,252 (+)NCBICelera
Cytogenetic Map2q32.2NCBI
HuRef2182,862,271 - 182,928,103 (+)NCBIHuRef
CHM1_12191,008,368 - 191,074,067 (+)NCBICHM1_1
T2T-CHM13v2.02190,627,278 - 190,693,074 (+)NCBIT2T-CHM13v2.0
1700019D03Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39152,961,483 - 53,031,816 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl152,961,483 - 53,059,338 (-)EnsemblGRCm39 Ensembl
GRCm38152,922,324 - 52,992,657 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl152,922,324 - 53,020,179 (-)EnsemblGRCm38mm10GRCm38
MGSCv37152,981,971 - 53,009,684 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36152,869,672 - 52,897,385 (-)NCBIMGSCv36mm8
Celera153,465,538 - 53,492,651 (-)NCBICelera
Cytogenetic Map1C1.1NCBI
cM Map126.99NCBI
C9h2orf88
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8956,037,234 - 56,076,793 (+)NCBIGRCr8
mRatBN7.2948,539,140 - 48,584,882 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl948,568,409 - 48,584,831 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx957,086,832 - 57,126,474 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0962,209,667 - 62,249,303 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0960,505,647 - 60,545,289 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0953,395,684 - 53,464,930 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl953,440,272 - 53,440,595 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0953,068,168 - 53,131,324 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4945,558,745 - 45,559,487 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera946,208,942 - 46,278,615 (+)NCBICelera
Cytogenetic Map9q22NCBI
LOC102003714
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554038,797,416 - 8,847,431 (-)NCBIChiLan1.0ChiLan1.0
C13H2orf88
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21392,832,422 - 92,895,809 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B92,847,406 - 92,910,793 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B77,446,455 - 77,509,809 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B195,365,347 - 195,428,651 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B195,424,996 - 195,425,283 (+)Ensemblpanpan1.1panPan2
C37H2orf88
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.137611,530 - 840,144 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl37836,416 - 836,703 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha371,584,925 - 1,796,102 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.037505,545 - 734,425 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.137515,749 - 744,781 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.037484,017 - 712,400 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.037512,219 - 741,098 (+)NCBIUU_Cfam_GSD_1.0
CUNH2orf88
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303148,902,554 - 148,951,170 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365067,883,823 - 7,903,949 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
C15H2orf88
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1594,478,021 - 94,791,775 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11594,628,283 - 94,794,114 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215105,739,108 - 105,827,780 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CUNH2orf88
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11075,573,749 - 75,710,761 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1075,707,093 - 75,707,380 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040123,758,782 - 123,778,605 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_004868984   ⟹   XP_004869041
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248545,770,852 - 5,833,474 (-)NCBI
RefSeq Acc Id: XM_021247721   ⟹   XP_021103380
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248545,770,852 - 5,846,616 (-)NCBI
RefSeq Acc Id: XP_021103380   ⟸   XM_021247721
- UniProtKB: G5BGL2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004869041   ⟸   XM_004868984
- UniProtKB: G5BGL2 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000044500 UniProtKB/TrEMBL
  ENSHGLG00100032804 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000058113 UniProtKB/TrEMBL
  ENSHGLT00000062011 UniProtKB/TrEMBL
  ENSHGLT00000077592 UniProtKB/TrEMBL
  ENSHGLT00000078666 UniProtKB/TrEMBL
  ENSHGLT00000090323 UniProtKB/TrEMBL
  ENSHGLT00000091782 UniProtKB/TrEMBL
  ENSHGLT00100049263 UniProtKB/TrEMBL
  ENSHGLT00100051118 UniProtKB/TrEMBL
  ENSHGLT00100060297 UniProtKB/TrEMBL
  ENSHGLT00100064697 UniProtKB/TrEMBL
  ENSHGLT00100065504 UniProtKB/TrEMBL
  ENSHGLT00100073861 UniProtKB/TrEMBL
  ENSHGLT00100076554 UniProtKB/TrEMBL
  ENSHGLT00100078944 UniProtKB/TrEMBL
  ENSHGLT00100085747 UniProtKB/TrEMBL
InterPro Small_membr_AKAP UniProtKB/TrEMBL
KEGG Report hgl:101726513 UniProtKB/TrEMBL
NCBI Gene CUNH2orf88 ENTREZGENE
PANTHER PTHR36471 UniProtKB/TrEMBL
  SMALL MEMBRANE A-KINASE ANCHOR PROTEIN UniProtKB/TrEMBL
Pfam SmAKAP UniProtKB/TrEMBL
UniProt G5BGL2 ENTREZGENE, UniProtKB/TrEMBL