Myo1a (myosin IA) - Rat Genome Database
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Gene: Myo1a (myosin IA) Heterocephalus glaber
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Symbol: Myo1a
Name: myosin IA
RGD ID: 18902173
Description: ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN cell projection organization (ortholog); microvillus assembly (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 48 (ortholog); Nonsyndromic Sensorineural Hearing Loss (ortholog); prostate cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); basal plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: unconventional myosin-Ia
Orthologs:
Homo sapiens (human) : MYO1A (myosin IA)  HGNC  Alliance
Mus musculus (house mouse) : Myo1a (myosin IA)  MGI  Alliance
Rattus norvegicus (Norway rat) : Myo1a (myosin IA)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Myo1a (myosin IA)
Pan paniscus (bonobo/pygmy chimpanzee) : MYO1A (myosin IA)
Canis lupus familiaris (dog) : MYO1A (myosin IA)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Myo1a (myosin IA)
Sus scrofa (pig) : MYO1A (myosin IA)
Chlorocebus sabaeus (African green monkey) : MYO1A (myosin IA)
more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462480210,892,685 - 10,913,953 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

Genomics

Comparative Map Data
Myo1a
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462480210,892,685 - 10,913,953 (+)NCBI
MYO1A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1257,028,517 - 57,051,198 (-)EnsemblGRCh38hg38GRCh38
GRCh381257,028,517 - 57,051,198 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371257,422,301 - 57,444,549 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361255,708,568 - 55,730,160 (-)NCBINCBI36hg18NCBI36
Build 341255,708,568 - 55,730,160NCBI
Celera1257,076,230 - 57,097,822 (-)NCBI
Cytogenetic Map12q13.3NCBI
HuRef1254,460,846 - 54,483,094 (-)NCBIHuRef
CHM1_11257,390,019 - 57,412,268 (-)NCBICHM1_1
Myo1a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910127,539,306 - 127,556,809 (+)NCBI
GRCm3810127,703,436 - 127,720,940 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10127,705,170 - 127,720,940 (+)EnsemblGRCm38mm10GRCm38
MGSCv3710127,142,312 - 127,157,996 (+)NCBIGRCm37mm9NCBIm37
MGSCv3610128,360,172 - 128,375,679 (+)NCBImm8
MGSCv3610127,108,205 - 127,123,887 (+)NCBImm8
Celera10130,095,595 - 130,115,507 (+)NCBICelera
Cytogenetic Map10D3NCBI
cM Map1074.62NCBI
Myo1a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0771,000,299 - 71,019,386 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl771,004,417 - 71,019,372 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0771,175,336 - 71,192,057 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4767,701,959 - 67,712,478 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1767,722,688 - 67,731,600 (+)NCBI
Celera760,682,101 - 60,697,057 (+)NCBICelera
Cytogenetic Map7q22NCBI
Myo1a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554584,776,345 - 4,796,075 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554584,776,345 - 4,796,075 (-)NCBIChiLan1.0ChiLan1.0
MYO1A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11232,130,054 - 32,152,335 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1232,130,708 - 32,152,335 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01231,875,570 - 31,899,279 (+)NCBIMhudiblu_PPA_v0panPan3
MYO1A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl101,159,812 - 1,193,153 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1101,159,816 - 1,194,452 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Myo1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366461,238,630 - 1,258,491 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MYO1A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl522,338,029 - 22,363,568 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1522,338,024 - 22,363,528 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2524,264,620 - 24,281,452 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MYO1A
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl1152,936,090 - 52,961,486 (-)Ensembl
ChlSab1.11152,939,744 - 52,961,957 (-)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004861265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01071382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_004861265   ⟹   XP_004861322
RefSeq Status:
Type: CODING
Position:
Molerat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462480210,892,685 - 10,913,953 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004861322 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_004861322   ⟸   XM_004861265


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000016942 ENTREZGENE
Ensembl Protein ENSHGLP00000023752 ENTREZGENE
Ensembl Transcript ENSHGLT00000023970 ENTREZGENE
NCBI Gene Myo1a ENTREZGENE