Capn3 (Heterocephalus glaber - naked mole-rat) |
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CAPN3 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 15 | 42,359,501 - 42,412,317 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 15 | 42,359,498 - 42,412,949 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 15 | 42,651,699 - 42,704,515 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 15 | 40,427,593 - 40,491,807 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 15 | 40,427,592 - 40,491,807 | NCBI | | | | | Celera | 15 | 19,408,011 - 19,472,224 (+) | NCBI | | Celera | | | Cytogenetic Map | 15 | q15.1 | NCBI | | | | | HuRef | 15 | 19,499,872 - 19,552,636 (+) | NCBI | | HuRef | | | CHM1_1 | 15 | 42,770,186 - 42,823,000 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 15 | 40,165,536 - 40,218,365 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Capn3 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 120,294,074 - 120,335,400 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 120,294,053 - 120,335,399 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 120,463,593 - 120,504,919 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 120,456,019 - 120,504,913 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 120,463,572 - 120,504,918 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 120,289,329 - 120,330,655 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 120,155,314 - 120,195,940 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 121,617,948 - 121,659,023 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | E5 | NCBI | | | | | cM Map | 2 | 60.31 | NCBI | | | | |
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Capn3 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 127,860,002 - 127,913,677 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 107,407,518 - 107,457,858 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 107,407,850 - 107,457,858 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 111,082,641 - 111,132,438 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 119,678,209 - 119,728,005 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 117,338,596 - 117,388,398 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 112,227,486 - 112,278,408 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 112,228,720 - 112,278,408 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 118,776,357 - 118,825,812 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 106,946,878 - 106,998,274 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 106,843,308 - 106,894,702 (+) | NCBI | | | | | Celera | 3 | 106,315,875 - 106,366,640 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q35 | NCBI | | | | |
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Capn3 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955416 | 9,070,399 - 9,117,794 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955416 | 9,070,479 - 9,121,099 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LOC100984344 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 16 | 31,516,778 - 31,661,908 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 15 | 35,671,129 - 35,815,136 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 15 | 21,227,371 - 21,372,406 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 15 | 39,458,400 - 39,528,820 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 15 | 39,386,377 - 39,468,956 (+) | Ensembl | panpan1.1 | | panPan2 | | PanPan1.1 Ensembl | 15 | 39,476,302 - 39,528,820 (+) | Ensembl | panpan1.1 | | panPan2 | |
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CAPN3 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 30 | 9,329,190 - 9,384,622 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 30 | 9,329,015 - 9,383,772 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 30 | 9,387,300 - 9,442,600 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 30 | 9,464,173 - 9,519,888 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 30 | 9,464,000 - 9,519,096 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 30 | 9,384,166 - 9,439,578 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 30 | 9,489,492 - 9,545,424 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 30 | 9,623,343 - 9,678,674 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Capn3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024408640 | 87,819,711 - 87,863,585 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936471 | 5,668,169 - 5,711,075 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936471 | 5,667,839 - 5,711,822 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CAPN3 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 1 | 128,960,118 - 129,013,546 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 128,960,117 - 129,013,508 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 143,852,337 - 143,905,767 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | | Pig Cytomap | 1 | q15-q17 | NCBI | | | | |
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CAPN3 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 26 | 40,568,320 - 40,657,443 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 26 | 40,568,885 - 40,625,597 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666048 | 100,380,987 - 100,442,711 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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