Golga7 (golgin A7) - Rat Genome Database

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Gene: Golga7 (golgin A7) Heterocephalus glaber
Analyze
Symbol: Golga7
Name: golgin A7
RGD ID: 18901688
Description: INVOLVED IN Golgi to plasma membrane transport (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN Golgi apparatus (inferred); Golgi membrane (inferred); Golgi stack (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Golgin subfamily A member 7
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247801,764,863 - 1,787,569 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247801,766,821 - 1,787,405 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Golga7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247801,764,863 - 1,787,569 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247801,766,821 - 1,787,405 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
GOLGA7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38841,490,396 - 41,510,980 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl841,488,200 - 41,511,095 (+)EnsemblGRCh38hg38GRCh38
GRCh37841,347,915 - 41,368,499 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36841,467,238 - 41,487,656 (+)NCBINCBI36Build 36hg18NCBI36
Build 34841,467,237 - 41,487,654NCBI
Celera840,297,177 - 40,317,582 (+)NCBICelera
Cytogenetic Map8p11.21NCBI
HuRef839,875,887 - 39,896,291 (+)NCBIHuRef
CHM1_1841,396,465 - 41,416,889 (+)NCBICHM1_1
T2T-CHM13v2.0841,764,091 - 41,784,672 (+)NCBIT2T-CHM13v2.0
Golga7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39823,731,342 - 23,747,096 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl823,731,362 - 23,747,090 (-)EnsemblGRCm39 Ensembl
GRCm38823,241,326 - 23,258,903 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl823,241,346 - 23,257,074 (-)EnsemblGRCm38mm10GRCm38
MGSCv37824,351,798 - 24,367,552 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36824,706,892 - 24,722,557 (-)NCBIMGSCv36mm8
Celera824,738,054 - 24,753,828 (-)NCBICelera
Cytogenetic Map8A2NCBI
cM Map811.42NCBI
Golga7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81675,469,794 - 75,485,055 (+)NCBIGRCr8
mRatBN7.21668,767,259 - 68,782,536 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1668,767,299 - 68,782,511 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx350,107,114 - 50,107,622 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0358,690,627 - 58,691,135 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0356,463,609 - 56,464,117 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01673,564,172 - 73,579,389 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1673,564,243 - 73,579,382 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01673,198,435 - 73,213,647 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41673,225,605 - 73,240,751 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11673,225,869 - 73,241,013 (+)NCBI
Celera1666,658,822 - 66,673,968 (+)NCBICelera
Cytogenetic Map16q12.5NCBI
Golga7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555361,386,652 - 1,408,727 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555361,386,760 - 1,408,628 (-)NCBIChiLan1.0ChiLan1.0
GOLGA7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2759,942,484 - 59,964,360 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1835,659,769 - 35,681,645 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0840,736,824 - 40,756,458 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1838,187,126 - 38,206,721 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl838,185,103 - 38,206,714 (+)Ensemblpanpan1.1panPan2
GOLGA7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11624,083,498 - 24,102,024 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1624,084,540 - 24,102,440 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1624,588,238 - 24,606,766 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01625,831,453 - 25,849,948 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1625,831,453 - 25,849,809 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11624,203,309 - 24,221,832 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01624,765,424 - 24,783,951 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01624,816,764 - 24,835,294 (-)NCBIUU_Cfam_GSD_1.0
Golga7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494347,116,521 - 47,133,551 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367851,072,909 - 1,089,945 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367851,072,917 - 1,089,842 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GOLGA7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1710,623,797 - 10,644,296 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11710,624,378 - 10,643,844 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21711,988,599 - 12,008,386 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GOLGA7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1839,471,721 - 39,491,555 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl839,471,668 - 39,491,866 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660522,328,705 - 2,348,651 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000004006   ⟹   ENSHGLP00000003948
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247801,764,863 - 1,787,569 (-)Ensembl
RefSeq Acc Id: XM_004855308   ⟹   XP_004855365
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247801,766,821 - 1,787,405 (-)NCBI
RefSeq Acc Id: XM_004855309   ⟹   XP_004855366
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247801,766,821 - 1,787,343 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004855365 (Get FASTA)   NCBI Sequence Viewer  
  XP_004855366 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000003948
  ENSHGLP00000058930
  ENSHGLP00100036546
GenBank Protein JAN96713 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_004855365   ⟸   XM_004855308
- UniProtKB: A0A0P6JTG7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004855366   ⟸   XM_004855309
- UniProtKB: A0A0P6JTG7 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000003948   ⟸   ENSHGLT00000004006


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000002906 Ensembl, ENTREZGENE
  ENSHGLG00000035035 UniProtKB/TrEMBL
  ENSHGLG00100011369 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000004006 ENTREZGENE
  ENSHGLT00000056476 UniProtKB/TrEMBL
  ENSHGLT00100049312 UniProtKB/TrEMBL
InterPro Golgin_A_7/ERF4 UniProtKB/TrEMBL
KEGG Report hgl:101719520 UniProtKB/TrEMBL
NCBI Gene Golga7 ENTREZGENE
PANTHER GOLGI AUTOANTIGEN, GOLGIN SUBFAMILY A, 7 UniProtKB/TrEMBL
  GOLGIN SUBFAMILY A MEMBER 7 UniProtKB/TrEMBL
Pfam Erf4 UniProtKB/TrEMBL
UniProt A0A0P6JTG7 ENTREZGENE, UniProtKB/TrEMBL