Kcnk9 (potassium two pore domain channel subfamily K member 9) - Rat Genome Database

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Gene: Kcnk9 (potassium two pore domain channel subfamily K member 9) Heterocephalus glaber
Analyze
Symbol: Kcnk9
Name: potassium two pore domain channel subfamily K member 9
RGD ID: 18901201
Description: ENCODES a protein that exhibits voltage-gated potassium channel activity (ortholog); INVOLVED IN potassium ion import across plasma membrane (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Birk-Barel syndrome (ortholog); childhood absence epilepsy (ortholog); FOUND IN synaptic vesicle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Potassium channel subfamily K member 9; potassium channel, subfamily K, member 9
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473516,683,004 - 16,754,158 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473516,683,099 - 16,744,648 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Kcnk9
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473516,683,004 - 16,754,158 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473516,683,099 - 16,744,648 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
KCNK9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388139,600,838 - 139,703,123 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8139,600,838 - 139,704,109 (-)EnsemblGRCh38hg38GRCh38
GRCh378140,613,081 - 140,715,366 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368140,693,986 - 140,784,481 (-)NCBINCBI36Build 36hg18NCBI36
Build 348140,693,985 - 140,784,481NCBI
Celera8136,793,017 - 136,883,509 (-)NCBICelera
Cytogenetic Map8q24.3NCBI
HuRef8135,936,234 - 135,960,886 (-)NCBIHuRef
CHM1_18140,665,099 - 140,755,502 (-)NCBICHM1_1
T2T-CHM13v2.08140,720,918 - 140,823,244 (-)NCBIT2T-CHM13v2.0
Kcnk9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391572,373,722 - 72,422,415 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1572,372,938 - 72,418,189 (-)EnsemblGRCm39 Ensembl
GRCm381572,501,873 - 72,548,614 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1572,501,089 - 72,546,340 (-)EnsemblGRCm38mm10GRCm38
MGSCv371572,342,549 - 72,376,709 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361572,339,375 - 72,373,535 (-)NCBIMGSCv36mm8
Celera1574,012,672 - 74,045,135 (-)NCBICelera
Cytogenetic Map15D3NCBI
Kcnk9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87106,316,783 - 106,362,452 (-)NCBIGRCr8
mRatBN7.27104,429,186 - 104,473,924 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7104,437,934 - 104,473,175 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7106,175,328 - 106,209,602 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07108,396,911 - 108,431,185 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07108,344,952 - 108,379,226 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07113,894,918 - 113,938,397 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7113,903,557 - 113,937,941 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07113,833,880 - 113,875,792 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47110,232,743 - 110,267,546 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17110,266,630 - 110,301,866 (-)NCBI
Celera7100,852,648 - 100,887,465 (-)NCBICelera
Cytogenetic Map7q34NCBI
Kcnk9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546113,412,436 - 13,476,803 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546113,406,969 - 13,476,720 (-)NCBIChiLan1.0ChiLan1.0
KCNK9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27156,994,384 - 157,099,937 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18132,522,844 - 132,628,147 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08136,270,521 - 136,376,248 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18139,366,227 - 139,471,051 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8139,366,227 - 139,472,484 (-)Ensemblpanpan1.1panPan2
KCNK9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11334,461,430 - 34,475,070 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1334,473,488 - 34,474,866 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1334,390,607 - 34,467,593 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01334,854,737 - 34,931,927 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1334,856,016 - 34,933,171 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11334,578,072 - 34,655,127 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01334,667,586 - 34,744,661 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01335,088,113 - 35,164,345 (-)NCBIUU_Cfam_GSD_1.0
Kcnk9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244053033,834,735 - 3,868,314 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647011,260,828 - 11,296,854 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647011,260,835 - 11,294,391 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KCNK9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl43,561,939 - 3,641,315 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.143,562,086 - 3,643,248 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.243,047,161 - 3,123,869 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KCNK9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18133,872,599 - 133,964,259 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl8133,869,524 - 133,964,415 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660395,961,097 - 6,065,978 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000007590   ⟹   ENSHGLP00000007505
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473516,683,004 - 16,754,158 (+)Ensembl
RefSeq Acc Id: XM_013069584   ⟹   XP_012925038
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473516,683,099 - 16,744,648 (+)NCBI
Protein Sequences
Protein RefSeqs XP_012925038 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB17230 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000007505
Reference Protein Sequences
RefSeq Acc Id: XP_012925038   ⟸   XM_013069584
- UniProtKB: G5C6R9 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000007505   ⟸   ENSHGLT00000007590


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000005454 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000007590 ENTREZGENE
Gene3D-CATH 1.10.287.70 UniProtKB/TrEMBL
InterPro 2pore_dom_K_chnl UniProtKB/TrEMBL
  2pore_dom_K_chnl_TASK UniProtKB/TrEMBL
  K_chnl_dom UniProtKB/TrEMBL
  KCNK9 UniProtKB/TrEMBL
NCBI Gene Kcnk9 ENTREZGENE
PANTHER POTASSIUM CHANNEL SUBFAMILY K MEMBER 9 UniProtKB/TrEMBL
  POTASSIUM CHANNEL, SUBFAMILY K UniProtKB/TrEMBL
Pfam Ion_trans_2 UniProtKB/TrEMBL
PIRSF K_channel_subfamily_K_type UniProtKB/TrEMBL
PRINTS 2POREKCHANEL UniProtKB/TrEMBL
  TASK3CHANNEL UniProtKB/TrEMBL
  TASKCHANNEL UniProtKB/TrEMBL
Superfamily-SCOP Voltage-gated potassium channels UniProtKB/TrEMBL
UniProt G5C6R9 ENTREZGENE, UniProtKB/TrEMBL