Rgs21 (regulator of G protein signaling 21) - Rat Genome Database

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Gene: Rgs21 (regulator of G protein signaling 21) Heterocephalus glaber
Analyze
Symbol: Rgs21
Name: regulator of G protein signaling 21
RGD ID: 18900496
Description: INVOLVED IN sensory perception of bitter taste (ortholog); sensory perception of sweet taste (ortholog); sensory perception of umami taste (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); Hyperparathyroidism 1 (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: regulator of G-protein signaling 21
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248141,291,766 - 1,313,828 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248141,291,766 - 1,313,828 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
Rgs21
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248141,291,766 - 1,313,828 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248141,291,766 - 1,313,828 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
RGS21
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381192,316,992 - 192,367,285 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1192,316,992 - 192,367,285 (+)EnsemblGRCh38hg38GRCh38
GRCh371192,286,122 - 192,336,415 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361190,552,745 - 190,603,038 (+)NCBINCBI36Build 36hg18NCBI36
Celera1165,395,907 - 165,446,198 (+)NCBICelera
Cytogenetic Map1q31.2NCBI
HuRef1163,522,586 - 163,572,879 (+)NCBIHuRef
CHM1_11193,707,847 - 193,758,121 (+)NCBICHM1_1
T2T-CHM13v2.01191,663,986 - 191,714,313 (+)NCBIT2T-CHM13v2.0
Rgs21
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391144,392,388 - 144,443,185 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1144,392,386 - 144,443,405 (-)EnsemblGRCm39 Ensembl
GRCm381144,519,690 - 144,567,667 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1144,516,648 - 144,567,667 (-)EnsemblGRCm38mm10GRCm38
MGSCv371146,366,820 - 146,392,450 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361146,281,908 - 146,321,232 (-)NCBIMGSCv36mm8
Celera1147,075,900 - 147,101,511 (-)NCBICelera
Cytogenetic Map1FNCBI
cM Map162.66NCBI
Rgs21
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81358,789,739 - 58,839,579 (-)NCBIGRCr8
mRatBN7.21356,239,448 - 56,289,290 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1356,240,735 - 56,266,573 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1358,812,305 - 58,836,431 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01360,060,587 - 60,084,698 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01357,344,131 - 57,368,217 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01361,286,425 - 61,310,742 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1361,286,425 - 61,306,939 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01366,383,680 - 66,410,571 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41358,350,188 - 58,374,682 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1356,310,505 - 56,334,954 (-)NCBICelera
Cytogenetic Map13q21NCBI
Rgs21
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540629,778,745 - 29,800,009 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540629,778,745 - 29,800,009 (+)NCBIChiLan1.0ChiLan1.0
RGS21
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2157,417,062 - 57,467,247 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1157,081,040 - 57,131,224 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01167,785,840 - 167,836,026 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11172,080,852 - 172,130,971 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1172,080,852 - 172,130,971 (+)Ensemblpanpan1.1panPan2
RGS21
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1386,562,392 - 6,585,898 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl386,562,409 - 6,585,898 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha386,659,502 - 6,682,991 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0386,579,770 - 6,603,229 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl386,579,770 - 6,603,229 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1386,578,785 - 6,602,234 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0386,944,076 - 6,967,530 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0387,180,476 - 7,203,948 (-)NCBIUU_Cfam_GSD_1.0
Rgs21
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934481,434,134 - 81,478,379 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936638692,013 - 709,883 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936638688,157 - 709,883 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RGS21
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl101,340,758 - 1,394,203 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1101,341,821 - 1,396,191 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2102,929,142 - 2,955,021 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RGS21
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12537,053,888 - 37,084,551 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2537,060,252 - 37,078,574 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605538,034,992 - 38,053,732 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004862775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01077359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSHGLT00000016109   ⟹   ENSHGLP00000015942
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248141,291,766 - 1,313,828 (-)Ensembl
RefSeq Acc Id: XM_004862775   ⟹   XP_004862832
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248141,291,766 - 1,313,828 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004862832 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000015942
Reference Protein Sequences
RefSeq Acc Id: XP_004862832   ⟸   XM_004862775
- UniProtKB: G5C0G0 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000015942   ⟸   ENSHGLT00000016109


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000011391 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000016109 ENTREZGENE
Gene3D-CATH 1.10.196.10 UniProtKB/TrEMBL
  Regulator of G-protein Signalling 4, domain 2 UniProtKB/TrEMBL
InterPro RGS UniProtKB/TrEMBL
  RGS_sf UniProtKB/TrEMBL
  RGS_subdom1/3 UniProtKB/TrEMBL
  RGS_subdomain_2 UniProtKB/TrEMBL
NCBI Gene Rgs21 ENTREZGENE
PANTHER REGULATOR OF G PROTEIN SIGNALING UniProtKB/TrEMBL
  REGULATOR OF G-PROTEIN SIGNALING 21 UniProtKB/TrEMBL
Pfam RGS UniProtKB/TrEMBL
PRINTS RGSPROTEIN UniProtKB/TrEMBL
PROSITE RGS UniProtKB/TrEMBL
SMART RGS UniProtKB/TrEMBL
Superfamily-SCOP Regulator of G-protein signaling, RGS UniProtKB/TrEMBL
UniProt G5C0G0 ENTREZGENE, UniProtKB/TrEMBL