CPVL (carboxypeptidase vitellogenic like) - Rat Genome Database

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Gene: CPVL (carboxypeptidase vitellogenic like) Chlorocebus sabaeus
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Symbol: CPVL
Name: carboxypeptidase vitellogenic like
RGD ID: 18794475
Description: ENCODES a protein that exhibits carboxypeptidase activity (inferred); hydrolase activity (inferred); peptidase activity (inferred); INVOLVED IN proteolysis (inferred); ASSOCIATED WITH genetic disease (ortholog); pleomorphic xanthoastrocytoma (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: probable serine carboxypeptidase CPVL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12129,183,623 - 29,378,811 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2129,218,309 - 29,380,243 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604275,373,284 - 75,534,915 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
proteolysis  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
CPVL
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12129,183,623 - 29,378,811 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2129,218,309 - 29,380,243 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604275,373,284 - 75,534,915 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
CPVL
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38728,994,636 - 29,195,451 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl728,995,235 - 29,195,451 (-)EnsemblGRCh38hg38GRCh38
GRCh37729,034,252 - 29,235,067 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36729,001,772 - 29,152,678 (-)NCBINCBI36Build 36hg18NCBI36
Build 34728,808,489 - 28,959,343NCBI
Celera729,024,825 - 29,175,706 (-)NCBICelera
Cytogenetic Map7p14.3NCBI
HuRef728,917,113 - 29,067,846 (-)NCBIHuRef
CHM1_1729,035,432 - 29,186,275 (-)NCBICHM1_1
T2T-CHM13v2.0729,132,164 - 29,333,261 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2729,085,477 - 29,236,357 (-)NCBI
Cpvl
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39653,850,106 - 53,955,658 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl653,850,264 - 53,955,656 (-)EnsemblGRCm39 Ensembl
GRCm38653,873,121 - 53,978,673 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl653,873,279 - 53,978,671 (-)EnsemblGRCm38mm10GRCm38
MGSCv37653,823,373 - 53,928,656 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36653,802,992 - 53,908,251 (-)NCBIMGSCv36mm8
Celera654,399,973 - 54,506,031 (-)NCBICelera
Cytogenetic Map6B3NCBI
cM Map626.19NCBI
Cpvl
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8484,311,853 - 84,422,098 (-)NCBIGRCr8
mRatBN7.2482,981,421 - 83,091,730 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl482,981,422 - 83,085,655 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx488,202,471 - 88,306,769 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0483,977,873 - 84,082,176 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0482,400,515 - 82,504,543 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0484,026,851 - 84,137,172 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl484,025,926 - 84,131,030 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04148,689,022 - 148,799,272 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4482,238,756 - 82,344,130 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera477,859,667 - 77,963,572 (-)NCBICelera
Cytogenetic Map4q24NCBI
Cpvl
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541030,546,982 - 30,668,288 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541030,546,835 - 30,712,795 (-)NCBIChiLan1.0ChiLan1.0
CPVL
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2633,822,227 - 34,011,965 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1782,148,270 - 82,336,676 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0729,637,320 - 29,824,278 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1729,232,100 - 29,385,882 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl729,228,331 - 29,385,882 (-)Ensemblpanpan1.1panPan2
CPVL
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11442,047,810 - 42,218,714 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1442,048,057 - 42,183,991 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1441,483,279 - 41,609,956 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01441,990,016 - 42,116,784 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1441,990,017 - 42,125,499 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11442,107,209 - 42,234,145 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01441,785,841 - 41,913,098 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01442,144,177 - 42,271,020 (-)NCBIUU_Cfam_GSD_1.0
Cpvl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511886,290,999 - 86,398,342 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364785,503,123 - 5,610,056 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364785,503,123 - 5,610,053 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CPVL
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1843,559,619 - 43,689,542 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11843,559,619 - 43,690,951 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21847,965,830 - 48,095,438 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Cpvl
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247391,529,249 - 1,618,842 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247391,502,708 - 1,625,699 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium 1 18
Low 35 2 60
Below cutoff

Sequence


RefSeq Acc Id: ENSCSAT00000012469   ⟹   ENSCSAP00000010500
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl2129,218,309 - 29,380,243 (+)Ensembl
RefSeq Acc Id: XM_007981766   ⟹   XP_007979957
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.12129,218,586 - 29,378,811 (+)NCBI
Vero_WHO_p1.0NW_02366604275,373,284 - 75,534,812 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007981767   ⟹   XP_007979958
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.12129,218,346 - 29,378,811 (+)NCBI
Vero_WHO_p1.0NW_02366604275,373,284 - 75,534,915 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007981769   ⟹   XP_007979960
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.12129,218,346 - 29,378,811 (+)NCBI
Vero_WHO_p1.0NW_02366604275,373,284 - 75,534,810 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038004781   ⟹   XP_037860709
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366604275,373,284 - 75,534,812 (-)NCBI
Protein Sequences
Protein RefSeqs XP_007979957 (Get FASTA)   NCBI Sequence Viewer  
  XP_007979958 (Get FASTA)   NCBI Sequence Viewer  
  XP_007979960 (Get FASTA)   NCBI Sequence Viewer  
  XP_037860709 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000010500.1
RefSeq Acc Id: XP_007979958   ⟸   XM_007981767
- UniProtKB: A0A0D9RPG1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007979960   ⟸   XM_007981769
- UniProtKB: A0A0D9RPG1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007979957   ⟸   XM_007981766
- UniProtKB: A0A0D9RPG1 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCSAP00000010500   ⟸   ENSCSAT00000012469
RefSeq Acc Id: XP_037860709   ⟸   XM_038004781
- UniProtKB: A0A0D9RPG1 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000014372 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000012469.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.1820 UniProtKB/TrEMBL
InterPro AB_hydrolase UniProtKB/TrEMBL
  Peptidase_S10 UniProtKB/TrEMBL
  Ser_caboxypep_ser_AS UniProtKB/TrEMBL
NCBI Gene CPVL ENTREZGENE
PANTHER PTHR11802 UniProtKB/TrEMBL
  SERINE CARBOXYPEPTIDASE CPVL-RELATED UniProtKB/TrEMBL
Pfam Peptidase_S10 UniProtKB/TrEMBL
PRINTS CRBOXYPTASEC UniProtKB/TrEMBL
PROSITE CARBOXYPEPT_SER_SER UniProtKB/TrEMBL
Superfamily-SCOP SSF53474 UniProtKB/TrEMBL
UniProt A0A0D9RPG1 ENTREZGENE, UniProtKB/TrEMBL