PIGU (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 2 | 38,859,142 - 38,965,926 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 38,859,474 - 38,965,731 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666050 | 87,863,868 - 87,971,667 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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PIGU (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 20 | 34,560,542 - 34,677,092 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 20 | 34,560,542 - 34,698,790 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 20 | 33,148,346 - 33,264,896 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 20 | 32,612,007 - 32,728,750 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 20 | 32,612,006 - 32,728,750 | NCBI | | | | | Celera | 20 | 29,897,474 - 30,014,189 (-) | NCBI | | Celera | | | Cytogenetic Map | 20 | q11.22 | NCBI | | | | | HuRef | 20 | 29,928,895 - 30,044,277 (-) | NCBI | | HuRef | | | CHM1_1 | 20 | 33,049,160 - 33,166,522 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 20 | 36,283,696 - 36,397,781 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Pigu (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 155,120,163 - 155,199,344 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 155,120,163 - 155,199,350 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 155,278,243 - 155,357,424 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 155,278,243 - 155,357,430 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 155,103,988 - 155,183,160 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 154,969,693 - 155,048,865 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 161,210,808 - 161,289,950 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | H1 | NCBI | | | | | cM Map | 2 | 77.18 | NCBI | | | | |
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Pigu (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 164,245,011 - 164,341,444 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 143,784,831 - 143,881,268 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 143,784,832 - 143,880,807 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 147,650,902 - 147,724,039 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 156,268,183 - 156,341,312 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 154,007,720 - 154,080,840 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 150,803,096 - 150,885,597 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 150,803,097 - 150,885,616 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 157,171,341 - 157,253,350 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 145,760,693 - 145,841,916 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 145,666,315 - 145,747,538 (-) | NCBI | | | | | Celera | 3 | 142,512,108 - 142,584,503 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q41 | NCBI | | | | |
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Pigu (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955422 | 26,685,060 - 26,775,416 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955422 | 26,685,060 - 26,774,261 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PIGU (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 21 | 40,293,599 - 40,408,274 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 20 | 40,286,701 - 40,401,376 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 20 | 30,889,183 - 31,004,166 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 20 | 32,020,608 - 32,133,493 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 20 | 32,020,608 - 32,133,493 (-) | Ensembl | panpan1.1 | | panPan2 | |
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PIGU (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 24 | 23,674,133 - 23,768,119 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 24 | 23,674,137 - 23,768,073 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 24 | 23,319,722 - 23,413,720 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 24 | 24,364,628 - 24,458,705 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 24 | 24,364,632 - 24,458,661 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 24 | 23,651,987 - 23,746,793 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 24 | 23,747,087 - 23,841,930 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 24 | 24,186,009 - 24,280,792 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Pigu (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024408640 | 172,645,001 - 172,736,404 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936561 | 6,013,145 - 6,107,667 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936561 | 6,013,145 - 6,104,548 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PIGU (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 17 | 37,942,707 - 38,081,392 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 17 | 37,959,703 - 38,081,110 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 17 | 43,158,041 - 43,276,737 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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Pigu (Heterocephalus glaber - naked mole-rat) |
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