LOC103219985 (regenerating islet-derived protein 3-alpha) - Rat Genome Database

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Gene: LOC103219985 (regenerating islet-derived protein 3-alpha) Chlorocebus sabaeus
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Symbol: LOC103219985 (Ensembl: REG3A)
Name: regenerating islet-derived protein 3-alpha (Ensembl:regenerating family member 3 alpha)
RGD ID: 18782396
Description: ENCODES a protein that exhibits carbohydrate binding (inferred); hormone activity (inferred); identical protein binding (inferred); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (inferred); disruption of cell wall in another organism (inferred); negative regulation of inflammatory response to wounding (inferred); FOUND IN collagen-containing extracellular matrix (inferred); extracellular space (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11428,066,706 - 28,069,762 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1428,066,956 - 28,069,798 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604584,220,763 - 84,223,565 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30032202  


Genomics


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_007970062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCSAT00000013972   ⟹   ENSCSAP00000011953
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl1428,066,956 - 28,069,798 (+)Ensembl
RefSeq Acc Id: XM_007970062   ⟹   XP_007968253
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11428,066,706 - 28,069,762 (+)NCBI
Vero_WHO_p1.0NW_02366604584,220,763 - 84,223,565 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007968253 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000011953
  ENSCSAP00000011953.1
RefSeq Acc Id: XP_007968253   ⟸   XM_007970062
- UniProtKB: A0A0D9RTL4 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCSAP00000011953   ⟸   ENSCSAT00000013972


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000015875 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000013972.1 UniProtKB/TrEMBL
Gene3D-CATH 3.10.100.10 UniProtKB/TrEMBL
InterPro C-type_lectin-like UniProtKB/TrEMBL
  C-type_lectin-like/link_sf UniProtKB/TrEMBL
  C-type_lectin/snaclec_domain UniProtKB/TrEMBL
  C-type_lectin_CS UniProtKB/TrEMBL
  CTDL_fold UniProtKB/TrEMBL
KEGG Report csab:103219985 UniProtKB/TrEMBL
NCBI Gene LOC103219985 ENTREZGENE
PANTHER MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED UniProtKB/TrEMBL
  REGENERATING ISLET-DERIVED PROTEIN 3-ALPHA UniProtKB/TrEMBL
Pfam Lectin_C UniProtKB/TrEMBL
PRINTS PNCREATITSAP UniProtKB/TrEMBL
PROSITE C_TYPE_LECTIN_1 UniProtKB/TrEMBL
  C_TYPE_LECTIN_2 UniProtKB/TrEMBL
SMART CLECT UniProtKB/TrEMBL
Superfamily-SCOP SSF56436 UniProtKB/TrEMBL
UniProt A0A0D9RTL4 ENTREZGENE, UniProtKB/TrEMBL