GMPS (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 15 | 34,817,603 - 34,885,363 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 15 | 34,815,066 - 34,885,228 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 7,450,006 - 7,520,263 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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GMPS (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 3 | 155,869,430 - 155,944,020 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 155,870,650 - 155,944,020 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 155,588,439 - 155,661,809 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 157,071,019 - 157,138,215 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 157,071,026 - 157,138,223 | NCBI | | | | | Celera | 3 | 154,009,947 - 154,077,188 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q25.31 | NCBI | | | | | HuRef | 3 | 152,982,759 - 153,049,917 (+) | NCBI | | HuRef | | | CHM1_1 | 3 | 155,551,614 - 155,618,831 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 158,644,070 - 158,718,668 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Gmps (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 3 | 63,871,054 - 63,928,975 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 3 | 63,883,527 - 63,930,000 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 3 | 63,963,633 - 64,021,554 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 3 | 63,976,106 - 64,022,579 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 3 | 63,780,065 - 63,823,000 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 3 | 64,064,072 - 64,107,007 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 3 | 63,647,946 - 63,691,053 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | E1 | NCBI | | | | | cM Map | 3 | 30.08 | NCBI | | | | |
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Gmps (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 2 | 150,587,824 - 150,641,564 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 148,441,369 - 148,491,908 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 148,435,643 - 148,485,875 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 155,179,955 - 155,214,681 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 153,229,417 - 153,264,155 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 147,862,091 - 147,896,832 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 154,555,967 - 154,590,662 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 154,555,871 - 154,590,662 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 173,939,844 - 173,974,539 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 153,804,512 - 153,840,009 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 153,754,474 - 153,789,970 (+) | NCBI | | | | | Celera | 2 | 142,726,833 - 142,761,299 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | q31 | NCBI | | | | |
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Gmps (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955448 | 6,932,926 - 6,984,662 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955448 | 6,931,891 - 6,984,662 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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GMPS (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 153,783,747 - 153,852,239 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 153,788,477 - 153,862,949 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 152,925,905 - 152,999,180 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 160,977,222 - 161,045,214 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 160,977,222 - 161,045,214 (+) | Ensembl | panpan1.1 | | panPan2 | |
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GMPS (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 23 | 49,569,571 - 49,645,999 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 23 | 49,569,531 - 49,699,199 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 23 | 49,445,713 - 49,522,068 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 23 | 50,203,908 - 50,286,767 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 23 | 50,203,868 - 50,333,624 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 23 | 49,789,609 - 49,866,167 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 23 | 49,838,479 - 49,915,927 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 23 | 50,126,162 - 50,202,992 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Gmps (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405602 | 86,587,606 - 86,639,212 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936519 | 3,104,701 - 3,141,549 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936519 | 3,094,763 - 3,143,322 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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GMPS (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 13 | 95,738,659 - 95,819,759 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 95,742,342 - 95,820,903 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 103,766,547 - 103,819,693 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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Gmps (Heterocephalus glaber - naked mole-rat) |
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