E4F1 (E4F transcription factor 1)

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Gene: E4F1 (E4F transcription factor 1) Chlorocebus sabaeus

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Symbol:

E4F1

Name:

E4F transcription factor 1

RGD ID:

18748285

Description:

ENCODES a protein that exhibits cAMP response element binding (inferred); DNA binding (inferred); DNA-binding transcription activator activity, RNA polymerase II-specific (inferred); INVOLVED IN DNA replication (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of mitotic cell cycle, embryonic (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); developmental and epileptic encephalopathy 1 (ortholog); endometrial carcinoma (ortholog); FOUND IN nuclear body (inferred); nucleoplasm (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

transcription factor E4F1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	2,117,936 - 2,130,787 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	2,117,479 - 2,130,623 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666068	28,928,785 - 28,941,473 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant polycystic kidney disease (ISO)

developmental and epileptic encephalopathy 1 (ISO)

endometrial carcinoma (ISO)

epilepsy (ISO)

idiopathic generalized epilepsy (ISO)

Neoplastic Cell Transformation (ISO)

short-rib thoracic dysplasia 9 with or without polydactyly (ISO)

tuberous sclerosis 2 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA replication (IEA,ISO)

negative regulation of transcription by RNA polymerase II (IEA)

positive regulation of transcription by RNA polymerase II (IEA,ISO)

regulation of cell cycle process (IEA)

regulation of mitotic cell cycle, embryonic (IEA,ISO)

regulation of transcription by RNA polymerase II (IEA)

Cellular Component

nuclear body (IEA)

nucleoplasm (IEA)

nucleus (IEA)

spindle (IEA)

Molecular Function

cAMP response element binding (IEA)

DNA binding (IEA)

DNA-binding transcription activator activity, RNA polymerase II-specific (IEA)

DNA-binding transcription factor activity, RNA polymerase II-specific (IEA)

DNA-binding transcription repressor activity, RNA polymerase II-specific (IEA)

metal ion binding (IEA)

protein binding (ISO)

RNA polymerase II transcription regulatory region sequence-specific DNA binding (IEA)

RNA polymerase II-specific DNA-binding transcription factor binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

p53 signaling pathway (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

E4F1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	2,117,936 - 2,130,787 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	2,117,479 - 2,130,623 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666068	28,928,785 - 28,941,473 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

E4F1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	2,223,591 - 2,235,742 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	2,223,580 - 2,235,742 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	2,273,592 - 2,285,743 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	2,213,568 - 2,225,744 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	2,213,589 - 2,225,743	NCBI
Celera	16	2,487,988 - 2,500,164 (+)	NCBI		Celera
Cytogenetic Map	16	p13.3	NCBI
HuRef	16	2,199,659 - 2,211,835 (+)	NCBI		HuRef
CHM1_1	16	2,273,496 - 2,285,692 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	16	2,245,946 - 2,258,191 (+)	NCBI		T2T-CHM13v2.0

E4f1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	24,662,752 - 24,674,366 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	24,662,752 - 24,689,287 (-)	Ensembl		GRCm39 Ensembl
GRCm38	17	24,443,778 - 24,455,392 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	24,443,778 - 24,470,313 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	24,580,724 - 24,592,256 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	24,171,379 - 24,182,911 (-)	NCBI		MGSCv36	mm8
Celera	17	24,958,270 - 24,969,970 (-)	NCBI		Celera
Cytogenetic Map	17	A3.3	NCBI
cM Map	17	12.39	NCBI

E4f1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	13,978,975 - 13,999,646 (-)	NCBI		GRCr8
mRatBN7.2	10	13,471,478 - 13,495,018 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	13,474,456 - 13,485,974 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	18,220,916 - 18,232,399 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	17,709,761 - 17,721,244 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	13,208,946 - 13,220,429 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	13,812,335 - 13,835,847 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	13,815,293 - 13,826,945 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	13,629,321 - 13,644,753 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	13,701,558 - 13,713,008 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	13,698,967 - 13,713,008 (-)	NCBI
Celera	10	13,154,954 - 13,166,469 (-)	NCBI		Celera
Cytogenetic Map	10	q12	NCBI

E4f1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955442	15,030,363 - 15,041,877 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955442	15,031,210 - 15,041,437 (-)	NCBI	ChiLan1.0	ChiLan1.0

E4F1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	2,724,616 - 2,737,612 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	6,505,600 - 6,518,512 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	1,080,205 - 1,092,996 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	2,323,461 - 2,335,695 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	2,323,461 - 2,335,695 (+)	Ensembl	panpan1.1		panPan2

E4F1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	38,743,346 - 38,752,427 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	38,743,355 - 38,752,403 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	39,982,727 - 39,991,786 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	39,051,930 - 39,060,985 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	39,051,930 - 39,065,832 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	38,736,943 - 38,745,997 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	38,709,267 - 38,718,322 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	39,187,987 - 39,197,042 (-)	NCBI		UU_Cfam_GSD_1.0

E4f1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	104,879,637 - 104,898,330 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936694	1,809,882 - 1,829,157 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936694	1,811,131 - 1,829,193 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

E4F1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	39,761,356 - 39,772,262 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	39,757,679 - 39,773,024 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	42,408,014 - 42,418,803 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

E4f1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624824	38,146 - 49,019 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624824	38,062 - 50,183 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007982498	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007982505	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007982514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007982518	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000008935 ⟹ ENSCSAP00000007067

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	5	2,117,479 - 2,130,623 (+)	Ensembl

RefSeq Acc Id:

XM_007982498 ⟹ XP_007980689

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	5	2,117,938 - 2,130,787 (+)	NCBI
Vero_WHO_p1.0	NW_023666068	28,928,785 - 28,941,469 (-)	NCBI

Sequence:

show sequence

CCATCCCCGACCGGTGTTCTTCTCCCGTGACCCGGGTAATCATCCTGGGAGTCTCTAACACTAG
AGGCGGTCAGTGGGCAGCGAGCACCGTACCCCTGGTTGGAGCTGTGGCGGTTTCCCAGCAGCAG
CCGCGGGCGGGGCAACCTATCCTTAGGTCCGGAAGCTCTGGGGCGCGGCTGCCTCGCACCCGTC
AGTACGCTCGCCCCTCGCGTTCTCTGGCTCTCAAATCCCAGTGCAGCCTCGAACACAGATTCTT
CTGCTGCCCCGCCGCCTGCCTGTCAATCTGCTCCACCGTAACCACGCCCTCCTCACAGTCCCGC
TCCATCTTCGCTCTCAGCGGGCCCGGCCCTGCCTCTGCCCTTTAGGGCCACACTGCTATCCAGG
CCCCGCTCCCCGCATGTCCGTCAATCCGCTCCGGTTCCGCCCCGCCCGCCTCTCTCCGTTCCCT
CACGCCGGCCTCGGCGCGGCCCGTTGTTATGACGACATGGTCGTAAATCCGCCATCTTCCTGCG
GCGCGTTGCGACATGGAGGGCGCGATGGCAGTACGGGTGACGGCCGCTCATACGGCAGAAGCCC
CGGCCGAAGCCGGGCGAGAAGCGGGCGAGGGTGCGGTTGCGGCGGTGGCGGCGGCCTTGGCCCC
CAGCGGCTTCCTCGGCCTCCCGGCGCCCTTCAGCGAGGAAGGGCTGGAGGAAAAGCCAGACGGG
GCCCTGGCTGCCCAGCCTCCACCTTCCCAGGCCCTGCTGACAGCAGGCTCGTTGCAGATGAGGA
CGATGTGCACAGATGCGGCCGCTGCCAGGCGGAGTTCACCGCCTTGGAGGATTTTGTTCAGCAC
AAGATTCAGAAGGCCTGCCATCGGGCCCCTCAGGAGGCCCTGCCTGCCACTCCTGCCACCACAG
CGTTGCTGGGCCAGGAGGTGGTGCCGGCAGCCCCAGGCCCAGATGAGCCCATCACTGTGGCCCA
CATTGTAGTGGAGGCAGCCTCCCTGGCAGCAGACATCAGCCACGCACCTGACCTTGTTGGTGGT
GGGCACATCAAAGAGGTCATCGTGGGTGCTGAGGCGGAGCCGGGGGACAGTGAGATGGCCGAGG
CCCCGGGCAGCCCCCACCAGCAGGGACTGGGGCTCGCAGGGGAGGGCGAGCCGGCCCAGGTGAA
GCTACTGGTGAACAAGGACGGCCGCTATGTGTGTGCACTGTGCCACAAGACCTTCAAGACGGGC
AGCATCCTCAAGGCCCACATGGTCACTCACAGCAGCCGCAAGGACCACGAGTGCAAGCTCTGTG
GGGCCTCCTTCCGCACCAAGGGCTCACTCATCCGGCACCACCGGCGGCATACGGATGAGCGCCC
CTACAAGTGCTCCAAGTGTGGGAAGAGCTTCCGGGAGTCGGGCGCACTGACCCGGCACCTCAAG
TCTCTCACCCCCTGCACGGAGAAAATCCGCTTCAGTGTGAGCAAGGATGTGGTTGTCAGCAAAG
AGGATGCACCTGCAGGGTCTGGAGCTGGAGCTGCCACCTTGGGGACAGTCACATCATCGGTGAC
AGGCGAGCCCATAGAGACTTCACCTGTGATTCACCTGGTGACAGATGCCAAGGGCACCGTCATC
CACGAAGTCCACGTCCAGATGCAGGAGCTGCCCCTGGGCATGAAAACCCTGGCCCCGGAGCCCC
CCATCTCCCAGGAGCTCCCCTGCTCCAGTGAAGGCAGCCGAGAGAACCTGCTGCACCAGGCCAT
GCAGAACTCCGGCATCGTCCTTGAGCGCACCGCTGGGGAGGAGGGTGCCCTGGAGCCAGCCCCT
GCTGCTGGGTCCAGTCCCCAGCCCCTGGCAGAGGCAGCCCCGCAGCTGCCAGTACTGGAAGTGC
AGCCGCTGGAGACACAGGTGGCCAGCGAGGCCTCAGCGGTGCCCAGAACCCACCCATGTCCTCA
GTGCAGTGAGACCTTCCCGACAGCAGCCACCCTGGAGGCCCACAAGAGGGGCCACACCGGGCCG
AGGCCGTTCGCCTGTGTGCAGTGTGGCAAGGCTTTCCCCAAGGCCTACCTGCTCAAGAAGCACC
AGGAGGTGCACGTGCGTGAGCGCCGCTTCCGCTGTGGCGACTGCGGGAAGCTCTACAAGACCAT
CGCCCATGTGCGTGGCCACCGGCGTGTCCACTCAGACGAGCGGCCATACCCTTGTCCCGAGTGT
GGCAAGCGCTACAAGACTAAGAACGCACAGCAGGTGCACTTCCGGACACATCTGGAGGAGAAGC
CGCATGTGTGCCAGTTCTGCAGCCGTGGCTTCCGAGAGAAGGGCTCGCTGGTGCGGCACGTGCG
ACACCACACAGGCGAGAAGCCATTCAAGTGCTACAAGTGCGGCCGTGGCTTTGCTGAGCACGGC
ACGCTGAACCGGCACCTGCGCACCAAAGGGGGCTGCCTGCTGGAAGTGGAGGAGTTGCTGGTGT
CCGAGGAGAGCCCCGCGGCAGCCACCACCGTCCTCGCTGAGGACCCGCACACGGTGTTGGTGGA
GTTCTCGTCCGTGGTAGCCGACACCCAGGAGTATATCATTGAGGCCGCTGCGGATGATGCGGAA
ACCAGTGAGGCCACGGAGATCATCGAGGGCACCCAGACGGAGGTGGACAGCCACATCATGAAGG
TGGTGCAGCAGATTGTGCACCAGGCCAGCGCCGGCCACCAGATCATTGTGCAGAATGTCACCAT
GGATGAGGAGACAGCGCTGGGCCCAGAGGCGGCTGCTGCTGACACCATCACCATCGCAACCCCC
GAGAGCCTGACAGAACAGGTGGCCATGACACTGGCCTCAGCCATCAGCGAGGGCACTGTGCTTG
CCACCCGGGCAGGGGCGAGTGGCACTGAACAGGCCACTGTGACCATGGTGTCATCAGAGGACAT
CGAGATCCTGGAGCATGCAGGCGAGCTGGTCATCTCCTCGCCAGAGGGCCAGCTGGAGGTGCAG
ACGGTCATCGTCTAGCATGAGGTCTGCGGGGTCCTGGCCGGGCAGGGACAGGGCAGAGGACCTG
AGAGCCCCGCCCACGCCTGCCTGGCAGAGAAGATGGCACAGAATGGAGGCGCCCCAAGATGGGC
AGTGTACATAAGAGTTTCTTGTTGCTTTACAATAAAACATGAGAACCTGCA

hide sequence

RefSeq Acc Id:

XM_007982505 ⟹ XP_007980696

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	5	2,117,936 - 2,130,787 (+)	NCBI
Vero_WHO_p1.0	NW_023666068	28,928,785 - 28,941,471 (-)	NCBI

Sequence:

show sequence

AGCCATCCCCGACCGGTGTTCTTCTCCCGTGACCCGGGTAATCATCCTGGGAGTCTCTAACACT
AGAGGCGGTCAGTGGGCAGCGAGCACCGTACCCCTGGTTGGAGCTGTGGCGGTTTCCCAGCAGC
AGCCGCGGGCGGGGCAACCTATCCTTAGGTCCGGAAGCTCTGGGGCGCGGCTGCCTCGCACCCG
TCAGTACGCTCGCCCCTCGCGTTCTCTGGCTCTCAAATCCCAGTGCAGCCTCGAACACAGATTC
TTCTGCTGCCCCGCCGCCTGCCTGTCAATCTGCTCCACCGTAACCACGCCCTCCTCACAGTCCC
GCTCCATCTTCGCTCTCAGCGGGCCCGGCCCTGCCTCTGCCCTTTAGGGCCACACTGCTATCCA
GGCCCCGCTCCCCGCATGTCCGTCAATCCGCTCCGGTTCCGCCCCGCCCGCCTCTCTCCGTTCC
CTCACGCCGGCCTCGGCGCGGCCCGTTGTTATGACGACATGGTCGTAAATCCGCCATCTTCCTG
CGGCGCGTTGCGACATGGAGGGCGCGATGGCAGTACGGGTGACGGCCGCTCATACGGCAGAAGC
CCCGGCCGAAGCCGGGCGAGAAGCGGGCGAGGGTGCGGTTGCGGCGGTGGCGGCGGCCTTGGCC
CCCAGCGGCTTCCTCGGCCTCCCGGCGCCCTTCAGCGAGGAAGGGCTGGAGGAAAAGCCAGACG
GGGCCCTGGCTGCCCAGCCTCCACCTTCCCAGGCCCTGCTGACAGCAGGCTCGTTGCAGATGAG
GACGATGTGCACAGATGCGGCCGCTGCCAGGCGGAGTTCACCGCCTTGGAGGATTTTGTTCAGC
ACAAGATTCAGAAGGCCTGCCATCGGGCCCCTCAGGAGGCCCTGCCTGCCACTCCTGCCACCAC
AGCGTTGCTGGGCCAGGAGGTGGTGCCGGCAGCCCCAGGCCCAGATGAGCCCATCACTGTGGCC
CACATTGTAGTGGAGGCAGCCTCCCTGGCAGCAGACATCAGCCACGCACCTGACCTTGTTGGTG
GTGGGCACATCAAAGAGGTCATCGTGGGTGCTGAGGCGGAGCCGGGGGACAGTGAGATGGCCGA
GGCCCCGGGCAGCCCCCACCAGCAGGGACTGGGGCTCGCAGGGGAGGGCGAGCCGGCCCAGGTG
AAGCTACTGGTGAACAAGGACGGCCGCTATGTGTGTGCACTGTGCCACAAGACCTTCAAGACGG
GCAGCATCCTCAAGGCCCACATGGTCACTCACAGCAGCCGCAAGGACCACGAGTGCAAGCTCTG
TGGGGCCTCCTTCCGCACCAAGGGCTCACTCATCCGGCACCACCGGCGGCATACGGATGAGCGC
CCCTACAAGTGCTCCAAGTGTGGGAAGAGCTTCCGGGAGTCGGGCGCACTGACCCGGCACCTCA
AGTCTCTCACCCCCTGCACGGAGAAAATCCGCTTCAGTGTGAGCAAGGATGTGGTTGTCAGCAA
AGAGGATGCACCTGCAGGGTCTGGAGCTGGAGCTGCCACCTTGGGGACAGTCACATCATCGGTG
ACAGGCGAGCCCATAGAGACTTCACCTGTGATTCACCTGGTGACAGATGCCAAGGGCACCGTCA
TCCACGAAGTCCACGTCCAGATGCAGGAGCTGCCCCTGGGCATGAAAACCCTGGCCCCGGAGCC
CCCCATCTCCCAGGAGCTCCCCTGCTCCAGTGAAGGCAGCCGAGAGAACCTGCTGCACCAGGCC
ATGCAGAACTCCGGCATCGTCCTTGAGCGCACCGCTGGGGAGGAGGGTGCCCTGGAGCCAGCCC
CTGCTGCTGGGTCCAGTCCCCAGCCCCTGGCAGAGGCAGCCCCGCAGCTGCCAGTACTGGAAGT
GCAGCCGCTGGAGACAGTGGCCAGCGAGGCCTCAGCGGTGCCCAGAACCCACCCATGTCCTCAG
TGCAGTGAGACCTTCCCGACAGCAGCCACCCTGGAGGCCCACAAGAGGGGCCACACCGGGCCGA
GGCCGTTCGCCTGTGTGCAGTGTGGCAAGGCTTTCCCCAAGGCCTACCTGCTCAAGAAGCACCA
GGAGGTGCACGTGCGTGAGCGCCGCTTCCGCTGTGGCGACTGCGGGAAGCTCTACAAGACCATC
GCCCATGTGCGTGGCCACCGGCGTGTCCACTCAGACGAGCGGCCATACCCTTGTCCCGAGTGTG
GCAAGCGCTACAAGACTAAGAACGCACAGCAGGTGCACTTCCGGACACATCTGGAGGAGAAGCC
GCATGTGTGCCAGTTCTGCAGCCGTGGCTTCCGAGAGAAGGGCTCGCTGGTGCGGCACGTGCGA
CACCACACAGGCGAGAAGCCATTCAAGTGCTACAAGTGCGGCCGTGGCTTTGCTGAGCACGGCA
CGCTGAACCGGCACCTGCGCACCAAAGGGGGCTGCCTGCTGGAAGTGGAGGAGTTGCTGGTGTC
CGAGGAGAGCCCCGCGGCAGCCACCACCGTCCTCGCTGAGGACCCGCACACGGTGTTGGTGGAG
TTCTCGTCCGTGGTAGCCGACACCCAGGAGTATATCATTGAGGCCGCTGCGGATGATGCGGAAA
CCAGTGAGGCCACGGAGATCATCGAGGGCACCCAGACGGAGGTGGACAGCCACATCATGAAGGT
GGTGCAGCAGATTGTGCACCAGGCCAGCGCCGGCCACCAGATCATTGTGCAGAATGTCACCATG
GATGAGGAGACAGCGCTGGGCCCAGAGGCGGCTGCTGCTGACACCATCACCATCGCAACCCCCG
AGAGCCTGACAGAACAGGTGGCCATGACACTGGCCTCAGCCATCAGCGAGGGCACTGTGCTTGC
CACCCGGGCAGGGGCGAGTGGCACTGAACAGGCCACTGTGACCATGGTGTCATCAGAGGACATC
GAGATCCTGGAGCATGCAGGCGAGCTGGTCATCTCCTCGCCAGAGGGCCAGCTGGAGGTGCAGA
CGGTCATCGTCTAGCATGAGGTCTGCGGGGTCCTGGCCGGGCAGGGACAGGGCAGAGGACCTGA
GAGCCCCGCCCACGCCTGCCTGGCAGAGAAGATGGCACAGAATGGAGGCGCCCCAAGATGGGCA
GTGTACATAAGAGTTTCTTGTTGCTTTACAATAAAACATGAGAACCTGCA

hide sequence

RefSeq Acc Id:

XM_007982514 ⟹ XP_007980705

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	5	2,118,336 - 2,130,787 (+)	NCBI
Vero_WHO_p1.0	NW_023666068	28,928,785 - 28,941,465 (-)	NCBI

Sequence:

show sequence

TGTCCGTCAATCCGCTCCGGTTCCGCCCCGCCCGCCTCTCTCCGTTCCCTCACGCCGGCCTCGG
CGCGGCCCGTTGTTATGACGACATGGTCGTAAATCCGCCATCTTCCTGCGGCGCGTTGCGACAT
GGAGGGCGCGATGGCAGTACGGGTGACGGCCGCTCATACGGCAGAAGCCCCGGCCGAAGCCGGG
CGAGAAGCGGGCGAGGGTGCGGTTGCGGCGGTGGCGGCGGCCTTGGCCCCCAGCGGCTTCCTCG
GCCTCCCGGCGCCCTTCAGCGAGGAAGATGAGGACGATGTGCACAGATGCGGCCGCTGCCAGGC
GGAGTTCACCGCCTTGGAGGATTTTGTTCAGCACAAGATTCAGAAGGCCTGCCATCGGGCCCCT
CAGGAGGCCCTGCCTGCCACTCCTGCCACCACAGCGTTGCTGGGCCAGGAGGTGGTGCCGGCAG
CCCCAGGCCCAGATGAGCCCATCACTGTGGCCCACATTGTAGTGGAGGCAGCCTCCCTGGCAGC
AGACATCAGCCACGCACCTGACCTTGTTGGTGGTGGGCACATCAAAGAGGTCATCGTGGGTGCT
GAGGCGGAGCCGGGGGACAGTGAGATGGCCGAGGCCCCGGGCAGCCCCCACCAGCAGGGACTGG
GGCTCGCAGGGGAGGGCGAGCCGGCCCAGGTGAAGCTACTGGTGAACAAGGACGGCCGCTATGT
GTGTGCACTGTGCCACAAGACCTTCAAGACGGGCAGCATCCTCAAGGCCCACATGGTCACTCAC
AGCAGCCGCAAGGACCACGAGTGCAAGCTCTGTGGGGCCTCCTTCCGCACCAAGGGCTCACTCA
TCCGGCACCACCGGCGGCATACGGATGAGCGCCCCTACAAGTGCTCCAAGTGTGGGAAGAGCTT
CCGGGAGTCGGGCGCACTGACCCGGCACCTCAAGTCTCTCACCCCCTGCACGGAGAAAATCCGC
TTCAGTGTGAGCAAGGATGTGGTTGTCAGCAAAGAGGATGCACCTGCAGGGTCTGGAGCTGGAG
CTGCCACCTTGGGGACAGTCACATCATCGGTGACAGGCGAGCCCATAGAGACTTCACCTGTGAT
TCACCTGGTGACAGATGCCAAGGGCACCGTCATCCACGAAGTCCACGTCCAGATGCAGGAGCTG
CCCCTGGGCATGAAAACCCTGGCCCCGGAGCCCCCCATCTCCCAGGAGCTCCCCTGCTCCAGTG
AAGGCAGCCGAGAGAACCTGCTGCACCAGGCCATGCAGAACTCCGGCATCGTCCTTGAGCGCAC
CGCTGGGGAGGAGGGTGCCCTGGAGCCAGCCCCTGCTGCTGGGTCCAGTCCCCAGCCCCTGGCA
GAGGCAGCCCCGCAGCTGCCAGTACTGGAAGTGCAGCCGCTGGAGACACAGGTGGCCAGCGAGG
CCTCAGCGGTGCCCAGAACCCACCCATGTCCTCAGTGCAGTGAGACCTTCCCGACAGCAGCCAC
CCTGGAGGCCCACAAGAGGGGCCACACCGGGCCGAGGCCGTTCGCCTGTGTGCAGTGTGGCAAG
GCTTTCCCCAAGGCCTACCTGCTCAAGAAGCACCAGGAGGTGCACGTGCGTGAGCGCCGCTTCC
GCTGTGGCGACTGCGGGAAGCTCTACAAGACCATCGCCCATGTGCGTGGCCACCGGCGTGTCCA
CTCAGACGAGCGGCCATACCCTTGTCCCGAGTGTGGCAAGCGCTACAAGACTAAGAACGCACAG
CAGGTGCACTTCCGGACACATCTGGAGGAGAAGCCGCATGTGTGCCAGTTCTGCAGCCGTGGCT
TCCGAGAGAAGGGCTCGCTGGTGCGGCACGTGCGACACCACACAGGCGAGAAGCCATTCAAGTG
CTACAAGTGCGGCCGTGGCTTTGCTGAGCACGGCACGCTGAACCGGCACCTGCGCACCAAAGGG
GGCTGCCTGCTGGAAGTGGAGGAGTTGCTGGTGTCCGAGGAGAGCCCCGCGGCAGCCACCACCG
TCCTCGCTGAGGACCCGCACACGGTGTTGGTGGAGTTCTCGTCCGTGGTAGCCGACACCCAGGA
GTATATCATTGAGGCCGCTGCGGATGATGCGGAAACCAGTGAGGCCACGGAGATCATCGAGGGC
ACCCAGACGGAGGTGGACAGCCACATCATGAAGGTGGTGCAGCAGATTGTGCACCAGGCCAGCG
CCGGCCACCAGATCATTGTGCAGAATGTCACCATGGATGAGGAGACAGCGCTGGGCCCAGAGGC
GGCTGCTGCTGACACCATCACCATCGCAACCCCCGAGAGCCTGACAGAACAGGTGGCCATGACA
CTGGCCTCAGCCATCAGCGAGGGCACTGTGCTTGCCACCCGGGCAGGGGCGAGTGGCACTGAAC
AGGCCACTGTGACCATGGTGTCATCAGAGGACATCGAGATCCTGGAGCATGCAGGCGAGCTGGT
CATCTCCTCGCCAGAGGGCCAGCTGGAGGTGCAGACGGTCATCGTCTAGCATGAGGTCTGCGGG
GTCCTGGCCGGGCAGGGACAGGGCAGAGGACCTGAGAGCCCCGCCCACGCCTGCCTGGCAGAGA
AGATGGCACAGAATGGAGGCGCCCCAAGATGGGCAGTGTACATAAGAGTTTCTTGTTGCTTTAC
AATAAAACATGAGAACCTGCA

hide sequence

RefSeq Acc Id:

XM_007982518 ⟹ XP_007980709

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	5	2,118,379 - 2,130,385 (+)	NCBI
Vero_WHO_p1.0	NW_023666068	28,929,287 - 28,941,473 (-)	NCBI

Sequence:

show sequence

GTTCCCTCACGCCGGCCTCGGCGCGGCCCGTTGTTATGACGACATGGTCGTAAATCCGCCATCT
TCCTGCGGCGCGTTGCGACATGGAGGGCGCGATGGCAGTACGGGTGACGGCCGCTCATACGGCA
GAAGCCCCGGCCGAAGCCGGGCGAGAAGCGGGCGAGGGTGCGGTTGCGGCGGTGGCGGCGGCCT
TGGCCCCCAGCGGCTTCCTCGGCCTCCCGGCGCCCTTCAGCGAGGAAGATGAGGACGATGTGCA
CAGATGCGGCCGCTGCCAGGCGGAGTTCACCGCCTTGGAGGATTTTGTTCAGCACAAGATTCAG
AAGGCCTGCCATCGGGCCCCTCAGGAGGCCCTGCCTGCCACTCCTGCCACCACAGCGTTGCTGG
GCCAGGAGGTGGTGCCGGCAGCCCCAGGCCCAGATGAGCCCATCACTGTGGCCCACATTGTAGT
GGAGGCAGCCTCCCTGGCAGCAGACATCAGCCACGCACCTGACCTTGTTGGTGGTGGGCACATC
AAAGAGGTCATCGTGGGTGCTGAGGCGGAGCCGGGGGACAGTGAGATGGCCGAGGCCCCGGGCA
GCCCCCACCAGCAGGGACTGGGGCTCGCAGGGGAGGGCGAGCCGGCCCAGGTGAAGCTACTGGT
GAACAAGGACGGCCGCTATGTGTGTGCACTGTGCCACAAGACCTTCAAGACGGGCAGCATCCTC
AAGGCCCACATGGTCACTCACAGCAGCCGCAAGGACCACGAGTGCAAGCTCTGTGGGGCCTCCT
TCCGCACCAAGGGCTCACTCATCCGGCACCACCGGCGGCATACGGATGAGCGCCCCTACAAGTG
CTCCAAGTGTGGGAAGAGCTTCCGGGAGTCGGGCGCACTGACCCGGCACCTCAAGTCTCTCACC
CCCTGCACGGAGAAAATCCGCTTCAGTGTGAGCAAGGATGTGGTTGTCAGCAAAGAGGATGCAC
CTGCAGGGTCTGGAGCTGGAGCTGCCACCTTGGGGACAGTCACATCATCGGTGACAGGCGAGCC
CATAGAGACTTCACCTGTGATTCACCTGGTGACAGATGCCAAGGGCACCGTCATCCACGAAGTC
CACGTCCAGATGCAGGAGCTGCCCCTGGGCATGAAAACCCTGGCCCCGGAGCCCCCCATCTCCC
AGGAGCTCCCCTGCTCCAGTGAAGGCAGCCGAGAGAACCTGCTGCACCAGGCCATGCAGAACTC
CGGCATCGTCCTTGAGCGCACCGCTGGGGAGGAGGGTGCCCTGGAGCCAGCCCCTGCTGCTGGG
TCCAGTCCCCAGCCCCTGGCAGAGGCAGCCCCGCAGCTGCCAGTACTGGAAGTGCAGCCGCTGG
AGACACAGGTGGCCAGCGAGGCCTCAGCGGTGCCCAGAACCCACCCATGTCCTCAGTGCAGTGA
GACCTTCCCGACAGCAGCCACCCTGGAGGCCCACAAGAGGGGCCACACCGGGCCGAGGCCGTTC
GCCTGTGTGCAGTGTGGCAAGGCTTTCCCCAAGGCCTACCTGCTCAAGAAGCACCAGGAGGTGC
ACGTGCGTGAGCGCCGCTTCCGCTGTGGCGACTGCGGGAAGCTCTACAAGACCATCGCCCATGT
GCGTGGCCACCGGCGTGTCCACTCAGACGAGCGGCCATACCCTTGTCCCGAGTGTGGCAAGCGC
TACAAGACTAAGAACGCACAGCAGGTGCACTTCCGGACACATCTGGAGGAGAAGCCGCATGTGT
GCCAGTTCTGCAGCCGTGGCTTCCGAGAGAAGGGCTCGCTGGTGCGGCACGTGCGACACCACAC
AGGCGAGAAGCCATTCAAGTGCTACAAGTGCGGCCGTGGCTTTGCTGAGCACGGCACGCTGAAC
CGGCACCTGCGCACCAAAGGGGGCTGCCTGCTGGAAGTGGAGGAGTTGCTGGTGTCCGAGGAGA
GCCCCGCGGCAGCCACCACCGTCCTCGCTGAGGACCCGCACACGGTGCCGCTGCGGATGATGCG
GAAACCAGTGAGGCCACGGAGATCATCGAGGGCACCCAGACGGAGGTGGACAGCCACATCATGA
AGGTGGTGCAGCAGATTGTGCACCAGGCCAGCGCCGGCCACCAGATCATTGTGCAGAATGTCAC
CATGGATGAGGAGACAGCGCTGGGCCCAGAGGCGGC

hide sequence

Protein Sequences


Protein RefSeqs	XP_007980689	(Get FASTA)	NCBI Sequence Viewer
	XP_007980696	(Get FASTA)	NCBI Sequence Viewer
	XP_007980705	(Get FASTA)	NCBI Sequence Viewer
	XP_007980709	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000007067
	ENSCSAP00000007067.1

RefSeq Acc Id:	XP_007980696 ⟸ XM_007982505
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_007980689 ⟸ XM_007982498
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_007980705 ⟸ XM_007982514
- Peptide Label:	isoform X3
- UniProtKB:	A0A0D9REM8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007980709 ⟸ XM_007982518
- Peptide Label:	isoform X4

Ensembl Acc Id:

ENSCSAP00000007067 ⟸ ENSCSAT00000008935

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000010850	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000008935.1	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	Znf_C2H2_sf	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
NCBI Gene	E4F1	ENTREZGENE
PANTHER	IP01257P-RELATED	UniProtKB/TrEMBL
	KRAB AND ZINC FINGER DOMAIN-CONTAINING	UniProtKB/TrEMBL
Pfam	zf-C2H2	UniProtKB/TrEMBL
	zf-C2H2_6	UniProtKB/TrEMBL
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
SMART	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57667	UniProtKB/TrEMBL
UniProt	A0A0D9REM8	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - PID (archival)