SFXN1 (sideroflexin 1) - Rat Genome Database

Name: SFXN1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: SFXN1 (sideroflexin 1) Chlorocebus sabaeus

Analyze

Symbol:

SFXN1

Name:

sideroflexin 1

RGD ID:

18734376

Description:

ENCODES a protein that exhibits L-alanine transmembrane transporter activity (inferred); L-serine transmembrane transporter activity (inferred); monoatomic ion transmembrane transporter activity (inferred); INVOLVED IN erythrocyte differentiation (ortholog); iron ion transport (ortholog); one-carbon metabolic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Colorectal Neoplasms (ortholog); genetic disease (ortholog); FOUND IN membrane (inferred); mitochondrial inner membrane (inferred); mitochondrial membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

sideroflexin-1

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SFXN1 (sideroflexin 1)	NCBI	Ortholog
Mus musculus (house mouse):	Sfxn1 (sideroflexin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Sfxn1 (sideroflexin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Sfxn1 (sideroflexin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SFXN1 (sideroflexin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SFXN1 (sideroflexin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Sfxn1 (sideroflexin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SFXN1 (sideroflexin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Sfxn1 (sideroflexin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	77,625,740 - 77,675,935 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	77,625,775 - 77,674,907 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666034	912,795 - 964,512 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Animal Disease Models (ISO)

Colorectal Neoplasms (ISO)

genetic disease (ISO)

lung adenocarcinoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

erythrocyte differentiation (IEA,ISO)

iron ion transport (IEA,ISO)

L-alanine transport (IEA)

L-serine transport (IEA)

monoatomic ion transmembrane transport (IEA)

monoatomic ion transport (IEA)

one-carbon metabolic process (IEA,ISO)

serine import into mitochondrion (IEA)

transmembrane transport (IEA)

Cellular Component

membrane (IEA)

mitochondrial inner membrane (IEA)

mitochondrial membrane (IEA)

mitochondrion (IEA)

Molecular Function

L-alanine transmembrane transporter activity (IEA)

L-serine transmembrane transporter activity (IEA)

monoatomic ion transmembrane transporter activity (IEA)

protein binding (ISO)

transmembrane transporter activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

SFXN1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	77,625,740 - 77,675,935 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	77,625,775 - 77,674,907 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666034	912,795 - 964,512 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

SFXN1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	175,478,560 - 175,529,742 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	175,477,062 - 175,529,742 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	174,905,563 - 174,956,745 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	174,838,189 - 174,888,218 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	174,838,188 - 174,888,218	NCBI
Celera	5	170,944,525 - 170,994,642 (+)	NCBI		Celera
Cytogenetic Map	5	q35.2	NCBI
HuRef	5	170,004,689 - 170,054,733 (+)	NCBI		HuRef
CHM1_1	5	174,337,958 - 174,388,345 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	176,022,352 - 176,073,526 (+)	NCBI		T2T-CHM13v2.0

Sfxn1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	54,225,675 - 54,262,365 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	54,225,888 - 54,262,361 (+)	Ensembl		GRCm39 Ensembl
GRCm38	13	54,071,656 - 54,108,346 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	54,071,869 - 54,108,342 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	54,167,214 - 54,203,715 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	54,081,490 - 54,117,966 (+)	NCBI		MGSCv36	mm8
Celera	13	55,144,580 - 55,182,917 (+)	NCBI		Celera
Cytogenetic Map	13	B1	NCBI
cM Map	13	28.4	NCBI

Sfxn1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	10,491,315 - 10,527,793 (-)	NCBI		GRCr8
mRatBN7.2	17	10,486,250 - 10,522,640 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	10,486,271 - 10,522,529 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	17	10,500,879 - 10,536,327 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	12,035,078 - 12,070,519 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	10,497,317 - 10,532,759 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	11,046,588 - 11,082,219 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	11,045,761 - 11,082,047 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	17	13,157,817 - 13,193,253 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	17	16,601,066 - 16,636,502 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	17	16,601,065 - 16,636,502 (-)	NCBI
Celera	17	10,555,805 - 10,591,237 (-)	NCBI		Celera
Cytogenetic Map	17	p14	NCBI

Sfxn1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955408	28,054,211 - 28,106,175 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955408	28,054,211 - 28,105,294 (+)	NCBI	ChiLan1.0	ChiLan1.0

SFXN1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	170,608,863 - 170,660,457 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	168,748,446 - 168,798,866 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	170,825,507 - 170,876,741 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	177,726,518 - 177,776,344 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	177,738,961 - 177,775,212 (+)	Ensembl	panpan1.1		panPan2

SFXN1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	37,485,360 - 37,517,743 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	37,487,438 - 37,512,289 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	37,431,872 - 37,472,432 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	37,851,035 - 37,891,568 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	37,851,044 - 37,891,597 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	37,675,678 - 37,716,181 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	37,863,646 - 37,904,164 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	38,373,604 - 38,414,131 (-)	NCBI		UU_Cfam_GSD_1.0

Sfxn1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	92,004,958 - 92,032,126 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936609	729,589 - 754,774 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936609	727,621 - 754,806 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SFXN1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	82,025,820 - 82,057,564 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	82,025,799 - 82,057,629 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	83,647,666 - 83,679,493 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Sfxn1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624733	14,403,957 - 14,452,280 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624733	14,404,646 - 14,451,943 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium	36	1	60
Low		19
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008015343	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008015344	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008015345	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008015346	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008015347	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008015348	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038010248	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038010251	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038010257	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000007555 ⟹ ENSCSAP00000005728

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	23	77,625,775 - 77,674,907 (+)	Ensembl

RefSeq Acc Id:

XM_008015343 ⟹ XP_008013534

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	23	77,625,743 - 77,675,935 (+)	NCBI
Vero_WHO_p1.0	NW_023666034	912,795 - 964,512 (-)	NCBI

Sequence:

show sequence

CCGGGGCGCGGACGCGCGCTCGCAGGCCCGCACGAGGACGCGCTCCGGGGACGCGCGAGGACAC
CGTGGCGGGAGAAGCGCTTCCGGTGGCGGCAAAGGCTGCACTAAGCGGGACCTGCGAGCTGCGC
ACGCTGCGGCCCGGGGGAAGCGTCCGGGACCATGTCTGGAGAACTACCACCAAACATTAACATC
AAGGAACCTCGATGGGATCAAAGCACTTTCATTGGACGAGCCAATCATTTCTTCACTGTAACTG
ACCCCAGGAACATTCTGTTAACAAATGAACAACTAGAGAGTGCAAGAAAAATAGTACATGATTA
CAGGCAAGGAATTGTTCCTCCTGGTCTTACAGAAAATGAATTGTGGAGAGCAAAGTACATCTAT
GATTCAGCTTTTCATCCTGACACTGGGGAGAAGATGATTTTGATAGGAAGAATGTCAGCCCAGG
TTCCCATGAACATGACCATCACAGGTTGCATGATGACGTTTTACAGGACTACGCCGGCTGTGCT
CTTCTGGCAGTGGATTAACCAGTCCTTCAATGCCGTCGTCAATTATACCAACAGAAGTGGAGAC
GCGCCCCTCACTGTCAATGAGTTGGGAACAGCTTACGTTTCTGCAACAACTGGTGCTGTAGCAA
CGGCTCTAGGACTCAACGCATTGACCAAGCATGTCTCACCACTGATAGGACGTTTTGTTCCCTT
TGCTGCCGTAGCTGCTGCTAATTGCATTAATATTCCATTAATGAGGCAAAGGGAACTCAAAGTT
GGCATTCCTGTCACAGATGAAAATGGGAACCGCTTGGGGGAGTCAGCGAACGCTGCGAAACAAG
CCATCACACAAGTCGTCGTGTCCAGGATTCTCATGGCAGCCCCTGGCATGGCCATCCCTCCATT
CATTATGAACACTTTGGAAAAGAAAGCCTTTTTGAAGAGGTTCCCGTGGATGAACGCACCCATT
CAAGTTGGGTTAGTTGGCTTCTGTTTGGTGTTTGCTACACCCCTGTGTTGTGCCCTGTTTCCTC
AGAAAAGTTCCATGTCTGTGACAAGCTTGGAGGCCGAGTTGCAAGCTAAGATCCAAGAGAGCCA
TCCTGAATTACGACGCGTGTACTTTAATAAGGGATTGTAAAGCAAGGAGGAAACCTCTGCAGCT
CATTCTGCCACTGCAAAGCTGGTGTAGCCATGCTGGTGAGAAAAATCCTGTTCAACCTGGGTTC
TCCCAGTTACAGAAACCTTTTAAAGATCCACATTCGCCTTTTAGAATAAAGCTGCTACTTTAAC
AGAGCACCTGGCATGGACCAAGTGCCTGATACTCCCTTACATTGAATCATGTTATGATTTATAG
AAATACCCTTCCTTTAGCTTTTATAGTCATTGTTTTTCAAAGACAGTATACCAGCCCTCACCCA
GGGTTTTAAAAAAGTACTAGTAGACATAGAATAGGTGCTCAGTGTATGGTCAGTAAATGTTCTA
TTGATTATCAATCAATGAAAAGAGAATCTGTTTAAAATATTGAATTTTCATCTCACTCCCATTC
CAAATCAAGGAGATCTCAGCAGTGAACTGGGAAAATATAAAAGCTCTGGACTAATCTATAAAAA
CTTACCCCGAAATATTAAGGGCAGTTTGCTTCTAGTGTGGGGACTGTGCTGGCCCAATGAAGGT
GATGAAGTTTTTGGATTTGGAGGGTGAAAGCTCCTTCACACCCCTTCCAAAAGTCAGTCACGGA
CCACTGCAACATGCCTTCCCTGCTGGATCATTCTATACATTCAGATTGTGGGTGGATTGCCTTG
GTTGACTTTTAATTTATTGTTTTATGTTCTTATAAAGATGTTAATCTTACCTTGCAGTTATTGA
CTTTATATTCAATTATTTACATCAAATAATGAAATTACTGAAATGTACACATGTCAAATTTTGG
AAGTATATTCAATACCAATGCTGTGTGAGTGGGCTGAATCTAGTTCATTGGTTTTTTTTTTTTT
TTTTTGGTAAGAAGTGAGACTACAGTTCCAGCTACCTACATGTCTTTTCTTGTCATCCTTATAG
ATCTCTTTGGCTTTCAGAAAGATACAGTGATAATGTGTATGAATCAGTCACAGTGAATTTTACT
TGAATATTGTATGTTGCATTCCACTTCATTTGAAGATAATGAAATGTACCACTGTTTACATCAT
CTGTAGTGATTTCACAGATAATATATTTAATGTAACAGA

hide sequence

RefSeq Acc Id:

XM_008015344 ⟹ XP_008013535

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	23	77,632,799 - 77,675,935 (+)	NCBI
Vero_WHO_p1.0	NW_023666034	915,232 - 958,037 (-)	NCBI

Sequence:

show sequence

AGCAAAGTCCCTGCACCATGTAAGTCCGGGACCATGTCTGGAGAACTACCACCAAACATTAACA
TCAAGGAACCTCGATGGGATCAAAGCACTTTCATTGGACGAGCCAATCATTTCTTCACTGTAAC
TGACCCCAGGAACATTCTGTTAACAAATGAACAACTAGAGAGTGCAAGAAAAATAGTACATGAT
TACAGGCAAGGAATTGTTCCTCCTGGTCTTACAGAAAATGAATTGTGGAGAGCAAAGTACATCT
ATGATTCAGCTTTTCATCCTGACACTGGGGAGAAGATGATTTTGATAGGAAGAATGTCAGCCCA
GGTTCCCATGAACATGACCATCACAGGTTGCATGATGACGTTTTACAGGACTACGCCGGCTGTG
CTCTTCTGGCAGTGGATTAACCAGTCCTTCAATGCCGTCGTCAATTATACCAACAGAAGTGGAG
ACGCGCCCCTCACTGTCAATGAGTTGGGAACAGCTTACGTTTCTGCAACAACTGGTGCTGTAGC
AACGGCTCTAGGACTCAACGCATTGACCAAGCATGTCTCACCACTGATAGGACGTTTTGTTCCC
TTTGCTGCCGTAGCTGCTGCTAATTGCATTAATATTCCATTAATGAGGCAAAGGGAACTCAAAG
TTGGCATTCCTGTCACAGATGAAAATGGGAACCGCTTGGGGGAGTCAGCGAACGCTGCGAAACA
AGCCATCACACAAGTCGTCGTGTCCAGGATTCTCATGGCAGCCCCTGGCATGGCCATCCCTCCA
TTCATTATGAACACTTTGGAAAAGAAAGCCTTTTTGAAGAGGTTCCCGTGGATGAACGCACCCA
TTCAAGTTGGGTTAGTTGGCTTCTGTTTGGTGTTTGCTACACCCCTGTGTTGTGCCCTGTTTCC
TCAGAAAAGTTCCATGTCTGTGACAAGCTTGGAGGCCGAGTTGCAAGCTAAGATCCAAGAGAGC
CATCCTGAATTACGACGCGTGTACTTTAATAAGGGATTGTAAAGCAAGGAGGAAACCTCTGCAG
CTCATTCTGCCACTGCAAAGCTGGTGTAGCCATGCTGGTGAGAAAAATCCTGTTCAACCTGGGT
TCTCCCAGTTACAGAAACCTTTTAAAGATCCACATTCGCCTTTTAGAATAAAGCTGCTACTTTA
ACAGAGCACCTGGCATGGACCAAGTGCCTGATACTCCCTTACATTGAATCATGTTATGATTTAT
AGAAATACCCTTCCTTTAGCTTTTATAGTCATTGTTTTTCAAAGACAGTATACCAGCCCTCACC
CAGGGTTTTAAAAAAGTACTAGTAGACATAGAATAGGTGCTCAGTGTATGGTCAGTAAATGTTC
TATTGATTATCAATCAATGAAAAGAGAATCTGTTTAAAATATTGAATTTTCATCTCACTCCCAT
TCCAAATCAAGGAGATCTCAGCAGTGAACTGGGAAAATATAAAAGCTCTGGACTAATCTATAAA
AACTTACCCCGAAATATTAAGGGCAGTTTGCTTCTAGTGTGGGGACTGTGCTGGCCCAATGAAG
GTGATGAAGTTTTTGGATTTGGAGGGTGAAAGCTCCTTCACACCCCTTCCAAAAGTCAGTCACG
GACCACTGCAACATGCCTTCCCTGCTGGATCATTCTATACATTCAGATTGTGGGTGGATTGCCT
TGGTTGACTTTTAATTTATTGTTTTATGTTCTTATAAAGATGTTAATCTTACCTTGCAGTTATT
GACTTTATATTCAATTATTTACATCAAATAATGAAATTACTGAAATGTACACATGTCAAATTTT
GGAAGTATATTCAATACCAATGCTGTGTGAGTGGGCTGAATCTAGTTCATTGGTTTTTTTTTTT
TTTTTTTGGTAAGAAGTGAGACTACAGTTCCAGCTACCTACATGTCTTTTCTTGTCATCCTTAT
AGATCTCTTTGGCTTTCAGAAAGATACAGTGATAATGTGTATGAATCAGTCACAGTGAATTTTA
CTTGAATATTGTATGTTGCATTCCACTTCATTTGAAGATAATGAAATGTACCACTGTTTACATC
ATCTGTAGTGATTTCACAGATAATATATTTAATGTAACAGA

hide sequence

RefSeq Acc Id:

XM_008015345 ⟹ XP_008013536

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	23	77,625,742 - 77,675,935 (+)	NCBI
Vero_WHO_p1.0	NW_023666034	915,232 - 964,421 (-)	NCBI

Sequence:

show sequence

CCCGGGGCGCGGACGCGCGCTCGCAGGCCCGCACGAGGACGCGCTCCGGGGACGCGCGAGGACA
CCGTGGCGGGAGAAGCGCTTCCGGTGGCGGCAAAGGCTGCACTAAGCGGGACCTGCGAGCTGCG
CACGCTGCGGCCCGGGGGAAGCGGTGAGTCGCGGGAGGCAGGCAGAGCCAGTCCGGGACCATGT
CTGGAGAACTACCACCAAACATTAACATCAAGGAACCTCGATGGGATCAAAGCACTTTCATTGG
ACGAGCCAATCATTTCTTCACTGTAACTGACCCCAGGAACATTCTGTTAACAAATGAACAACTA
GAGAGTGCAAGAAAAATAGTACATGATTACAGGCAAGGAATTGTTCCTCCTGGTCTTACAGAAA
ATGAATTGTGGAGAGCAAAGTACATCTATGATTCAGCTTTTCATCCTGACACTGGGGAGAAGAT
GATTTTGATAGGAAGAATGTCAGCCCAGGTTCCCATGAACATGACCATCACAGGTTGCATGATG
ACGTTTTACAGGACTACGCCGGCTGTGCTCTTCTGGCAGTGGATTAACCAGTCCTTCAATGCCG
TCGTCAATTATACCAACAGAAGTGGAGACGCGCCCCTCACTGTCAATGAGTTGGGAACAGCTTA
CGTTTCTGCAACAACTGGTGCTGTAGCAACGGCTCTAGGACTCAACGCATTGACCAAGCATGTC
TCACCACTGATAGGACGTTTTGTTCCCTTTGCTGCCGTAGCTGCTGCTAATTGCATTAATATTC
CATTAATGAGGCAAAGGGAACTCAAAGTTGGCATTCCTGTCACAGATGAAAATGGGAACCGCTT
GGGGGAGTCAGCGAACGCTGCGAAACAAGCCATCACACAAGTCGTCGTGTCCAGGATTCTCATG
GCAGCCCCTGGCATGGCCATCCCTCCATTCATTATGAACACTTTGGAAAAGAAAGCCTTTTTGA
AGAGGTTCCCGTGGATGAACGCACCCATTCAAGTTGGGTTAGTTGGCTTCTGTTTGGTGTTTGC
TACACCCCTGTGTTGTGCCCTGTTTCCTCAGAAAAGTTCCATGTCTGTGACAAGCTTGGAGGCC
GAGTTGCAAGCTAAGATCCAAGAGAGCCATCCTGAATTACGACGCGTGTACTTTAATAAGGGAT
TGTAAAGCAAGGAGGAAACCTCTGCAGCTCATTCTGCCACTGCAAAGCTGGTGTAGCCATGCTG
GTGAGAAAAATCCTGTTCAACCTGGGTTCTCCCAGTTACAGAAACCTTTTAAAGATCCACATTC
GCCTTTTAGAATAAAGCTGCTACTTTAACAGAGCACCTGGCATGGACCAAGTGCCTGATACTCC
CTTACATTGAATCATGTTATGATTTATAGAAATACCCTTCCTTTAGCTTTTATAGTCATTGTTT
TTCAAAGACAGTATACCAGCCCTCACCCAGGGTTTTAAAAAAGTACTAGTAGACATAGAATAGG
TGCTCAGTGTATGGTCAGTAAATGTTCTATTGATTATCAATCAATGAAAAGAGAATCTGTTTAA
AATATTGAATTTTCATCTCACTCCCATTCCAAATCAAGGAGATCTCAGCAGTGAACTGGGAAAA
TATAAAAGCTCTGGACTAATCTATAAAAACTTACCCCGAAATATTAAGGGCAGTTTGCTTCTAG
TGTGGGGACTGTGCTGGCCCAATGAAGGTGATGAAGTTTTTGGATTTGGAGGGTGAAAGCTCCT
TCACACCCCTTCCAAAAGTCAGTCACGGACCACTGCAACATGCCTTCCCTGCTGGATCATTCTA
TACATTCAGATTGTGGGTGGATTGCCTTGGTTGACTTTTAATTTATTGTTTTATGTTCTTATAA
AGATGTTAATCTTACCTTGCAGTTATTGACTTTATATTCAATTATTTACATCAAATAATGAAAT
TACTGAAATGTACACATGTCAAATTTTGGAAGTATATTCAATACCAATGCTGTGTGAGTGGGCT
GAATCTAGTTCATTGGTTTTTTTTTTTTTTTTTTGGTAAGAAGTGAGACTACAGTTCCAGCTAC
CTACATGTCTTTTCTTGTCATCCTTATAGATCTCTTTGGCTTTCAGAAAGATACAGTGATAATG
TGTATGAATCAGTCACAGTGAATTTTACTTGAATATTGTATGTTGCATTCCACTTCATTTGAAG
ATAATGAAATGTACCACTGTTTACATCATCTGTAGTGATTTCACAGATAATATATTTAATGTAA
CAGA

hide sequence

RefSeq Acc Id:

XM_008015347 ⟹ XP_008013538

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	23	77,625,742 - 77,675,935 (+)	NCBI
Vero_WHO_p1.0	NW_023666034	912,795 - 964,512 (-)	NCBI

Sequence:

show sequence

CCCGGGGCGCGGACGCGCGCTCGCAGGCCCGCACGAGGACGCGCTCCGGGGACGCGCGAGGACA
CCGTGGCGGGAGAAGCGCTTCCGGTGGCGGCAAAGGCTGCACTAAGCGGGACCTGCGAGCTGCG
CACGCTGCGGCCCGGGGGAAGCGTCCGGGACCATGTCTGGAGAACTACCACCAAACATTAACAT
CAAGGAACCTCGATGGGATCAAAGCACTTTCATTGGACGAGCCAATCATTTCTTCACTGTAACT
GACCCCAGGAACATTCTGTTAACAAATGAACAACTAGAGAGTGCAAGAAAAATAGTACATGATT
ACAGGCAAGGAATTGTTCCTCCTGGTCTTACAGAAAATGAATTGTGGAGAGCAAAGTACATCTA
TGATTCAGCTTTTCATCCTGACACTGGGGAGAAGATGATTTTGATAGGAAGAATGTCAGCCCAG
GTTCCCATGAACATGACCATCACAGGTTGCATGATGACGTTTTACAGGACTACGCCGGCTGTGC
TCTTCTGGCAGTGGATTAACCAGTCCTTCAATGCCGTCGTCAATTATACCAACAGAAGTGGAGA
CGCGCCCCTCACTGTCAATGAGTTGGGAACAGCTTACGTTTCTGCAACAACTGGTGCTGTAGCA
ACGGCTCTAGGACTCAACGCATTGACCAAGCATGTCTCACCACTGATAGGACGTTTTGTTCCCT
TTGCTGCCGTAGCTGCTGCTAATTGCATTAATATTCCATTAATGAGGCAAAGCCATCCCTCCAT
TCATTATGAACACTTTGGAAAAGAAAGCCTTTTTGAAGAGGTTCCCGTGGATGAACGCACCCAT
TCAAGTTGGGTTAGTTGGCTTCTGTTTGGTGTTTGCTACACCCCTGTGTTGTGCCCTGTTTCCT
CAGAAAAGTTCCATGTCTGTGACAAGCTTGGAGGCCGAGTTGCAAGCTAAGATCCAAGAGAGCC
ATCCTGAATTACGACGCGTGTACTTTAATAAGGGATTGTAAAGCAAGGAGGAAACCTCTGCAGC
TCATTCTGCCACTGCAAAGCTGGTGTAGCCATGCTGGTGAGAAAAATCCTGTTCAACCTGGGTT
CTCCCAGTTACAGAAACCTTTTAAAGATCCACATTCGCCTTTTAGAATAAAGCTGCTACTTTAA
CAGAGCACCTGGCATGGACCAAGTGCCTGATACTCCCTTACATTGAATCATGTTATGATTTATA
GAAATACCCTTCCTTTAGCTTTTATAGTCATTGTTTTTCAAAGACAGTATACCAGCCCTCACCC
AGGGTTTTAAAAAAGTACTAGTAGACATAGAATAGGTGCTCAGTGTATGGTCAGTAAATGTTCT
ATTGATTATCAATCAATGAAAAGAGAATCTGTTTAAAATATTGAATTTTCATCTCACTCCCATT
CCAAATCAAGGAGATCTCAGCAGTGAACTGGGAAAATATAAAAGCTCTGGACTAATCTATAAAA
ACTTACCCCGAAATATTAAGGGCAGTTTGCTTCTAGTGTGGGGACTGTGCTGGCCCAATGAAGG
TGATGAAGTTTTTGGATTTGGAGGGTGAAAGCTCCTTCACACCCCTTCCAAAAGTCAGTCACGG
ACCACTGCAACATGCCTTCCCTGCTGGATCATTCTATACATTCAGATTGTGGGTGGATTGCCTT
GGTTGACTTTTAATTTATTGTTTTATGTTCTTATAAAGATGTTAATCTTACCTTGCAGTTATTG
ACTTTATATTCAATTATTTACATCAAATAATGAAATTACTGAAATGTACACATGTCAAATTTTG
GAAGTATATTCAATACCAATGCTGTGTGAGTGGGCTGAATCTAGTTCATTGGTTTTTTTTTTTT
TTTTTTGGTAAGAAGTGAGACTACAGTTCCAGCTACCTACATGTCTTTTCTTGTCATCCTTATA
GATCTCTTTGGCTTTCAGAAAGATACAGTGATAATGTGTATGAATCAGTCACAGTGAATTTTAC
TTGAATATTGTATGTTGCATTCCACTTCATTTGAAGATAATGAAATGTACCACTGTTTACATCA
TCTGTAGTGATTTCACAGATAATATATTTAATGTAACAGA

hide sequence

RefSeq Acc Id:

XM_008015348 ⟹ XP_008013539

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	23	77,625,740 - 77,675,935 (+)	NCBI
Vero_WHO_p1.0	NW_023666034	915,232 - 964,334 (-)	NCBI

Sequence:

show sequence

GCCCCGGGGCGCGGACGCGCGCTCGCAGGCCCGCACGAGGACGCGCTCCGGGGACGCGCGAGGA
CACCGTGGCGGGAGAAGCGCTTCCGGTGGCGGCAAAGGCTGCACTAAGCGGGACCTGCGAGCTG
CGCACGCTGCGGCCCGGGGGAAGCGGTGAGTCGCGGGAGGCAGGCAGAGCCAGTCCGGGACCAT
GTCTGGAGAACTACCACCAAACATTAACATCAAGGAACCTCGATGGGATCAAAGCACTTTCATT
GGACGAGCCAATCATTTCTTCACTGTAACTGACCCCAGGAACATTCTGTTAACAAATGAACAAC
TAGAGAGTGCAAGAAAAATAGTACATGATTACAGAAAATGAATTGTGGAGAGCAAAGTACATCT
ATGATTCAGCTTTTCATCCTGACACTGGGGAGAAGATGATTTTGATAGGAAGAATGTCAGCCCA
GGTTCCCATGAACATGACCATCACAGGTTGCATGATGACGTTTTACAGGACTACGCCGGCTGTG
CTCTTCTGGCAGTGGATTAACCAGTCCTTCAATGCCGTCGTCAATTATACCAACAGAAGTGGAG
ACGCGCCCCTCACTGTCAATGAGTTGGGAACAGCTTACGTTTCTGCAACAACTGGTGCTGTAGC
AACGGCTCTAGGACTCAACGCATTGACCAAGCATGTCTCACCACTGATAGGACGTTTTGTTCCC
TTTGCTGCCGTAGCTGCTGCTAATTGCATTAATATTCCATTAATGAGGCAAAGGGAACTCAAAG
TTGGCATTCCTGTCACAGATGAAAATGGGAACCGCTTGGGGGAGTCAGCGAACGCTGCGAAACA
AGCCATCACACAAGTCGTCGTGTCCAGGATTCTCATGGCAGCCCCTGGCATGGCCATCCCTCCA
TTCATTATGAACACTTTGGAAAAGAAAGCCTTTTTGAAGAGGTTCCCGTGGATGAACGCACCCA
TTCAAGTTGGGTTAGTTGGCTTCTGTTTGGTGTTTGCTACACCCCTGTGTTGTGCCCTGTTTCC
TCAGAAAAGTTCCATGTCTGTGACAAGCTTGGAGGCCGAGTTGCAAGCTAAGATCCAAGAGAGC
CATCCTGAATTACGACGCGTGTACTTTAATAAGGGATTGTAAAGCAAGGAGGAAACCTCTGCAG
CTCATTCTGCCACTGCAAAGCTGGTGTAGCCATGCTGGTGAGAAAAATCCTGTTCAACCTGGGT
TCTCCCAGTTACAGAAACCTTTTAAAGATCCACATTCGCCTTTTAGAATAAAGCTGCTACTTTA
ACAGAGCACCTGGCATGGACCAAGTGCCTGATACTCCCTTACATTGAATCATGTTATGATTTAT
AGAAATACCCTTCCTTTAGCTTTTATAGTCATTGTTTTTCAAAGACAGTATACCAGCCCTCACC
CAGGGTTTTAAAAAAGTACTAGTAGACATAGAATAGGTGCTCAGTGTATGGTCAGTAAATGTTC
TATTGATTATCAATCAATGAAAAGAGAATCTGTTTAAAATATTGAATTTTCATCTCACTCCCAT
TCCAAATCAAGGAGATCTCAGCAGTGAACTGGGAAAATATAAAAGCTCTGGACTAATCTATAAA
AACTTACCCCGAAATATTAAGGGCAGTTTGCTTCTAGTGTGGGGACTGTGCTGGCCCAATGAAG
GTGATGAAGTTTTTGGATTTGGAGGGTGAAAGCTCCTTCACACCCCTTCCAAAAGTCAGTCACG
GACCACTGCAACATGCCTTCCCTGCTGGATCATTCTATACATTCAGATTGTGGGTGGATTGCCT
TGGTTGACTTTTAATTTATTGTTTTATGTTCTTATAAAGATGTTAATCTTACCTTGCAGTTATT
GACTTTATATTCAATTATTTACATCAAATAATGAAATTACTGAAATGTACACATGTCAAATTTT
GGAAGTATATTCAATACCAATGCTGTGTGAGTGGGCTGAATCTAGTTCATTGGTTTTTTTTTTT
TTTTTTTGGTAAGAAGTGAGACTACAGTTCCAGCTACCTACATGTCTTTTCTTGTCATCCTTAT
AGATCTCTTTGGCTTTCAGAAAGATACAGTGATAATGTGTATGAATCAGTCACAGTGAATTTTA
CTTGAATATTGTATGTTGCATTCCACTTCATTTGAAGATAATGAAATGTACCACTGTTTACATC
ATCTGTAGTGATTTCACAGATAATATATTTAATGTAACAGA

hide sequence

RefSeq Acc Id:

XM_038010248 ⟹ XP_037866176

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666034	915,232 - 964,357 (-)	NCBI

RefSeq Acc Id:

XM_038010251 ⟹ XP_037866179

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666034	928,923 - 964,512 (-)	NCBI

RefSeq Acc Id:

XM_038010257 ⟹ XP_037866185

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666034	915,232 - 964,413 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_008013534	(Get FASTA)	NCBI Sequence Viewer
	XP_008013535	(Get FASTA)	NCBI Sequence Viewer
	XP_008013536	(Get FASTA)	NCBI Sequence Viewer
	XP_008013538	(Get FASTA)	NCBI Sequence Viewer
	XP_008013539	(Get FASTA)	NCBI Sequence Viewer
	XP_037866176	(Get FASTA)	NCBI Sequence Viewer
	XP_037866179	(Get FASTA)	NCBI Sequence Viewer
	XP_037866185	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000005728
	ENSCSAP00000005728.1

RefSeq Acc Id:	XP_008013539 ⟸ XM_008015348
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_008013536 ⟸ XM_008015345
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RAT9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_008013538 ⟸ XM_008015347
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_008013534 ⟸ XM_008015343
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RAT9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_008013535 ⟸ XM_008015344
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RAT9 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCSAP00000005728 ⟸ ENSCSAT00000007555

RefSeq Acc Id:	XP_037866185 ⟸ XM_038010257
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RAT9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_037866176 ⟸ XM_038010248
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_037866179 ⟸ XM_038010251
- Peptide Label:	isoform X4

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000009487	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000007555.1	UniProtKB/TrEMBL
InterPro	Mtc	UniProtKB/TrEMBL
KEGG Report	csab:103245017	UniProtKB/TrEMBL
NCBI Gene	SFXN1	ENTREZGENE
PANTHER	PTHR11153	UniProtKB/TrEMBL
	SIDEROFLEXIN-1	UniProtKB/TrEMBL
Pfam	Mtc	UniProtKB/TrEMBL
UniProt	A0A0D9RAT9	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

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