TPD52 (tumor protein D52) - Rat Genome Database

Name: TPD52
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: TPD52 (tumor protein D52) Chlorocebus sabaeus

Analyze

Symbol:

TPD52

Name:

tumor protein D52

RGD ID:

18731691

Description:

ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN B cell differentiation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Neoplasm Recurrence, Local (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); glutamatergic synapse (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TPD52 (tumor protein D52)	NCBI	Ortholog
Mus musculus (house mouse):	Tpd52 (tumor protein D52)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Tpd52 (tumor protein D52)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tpd52 (tumor protein D52)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TPD52 (tumor protein D52)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TPD52 (tumor protein D52)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tpd52 (tumor protein D52)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TPD52 (tumor protein D52)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tpd52 (tumor protein D52)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	75,482,413 - 75,616,018 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666039	65,584,303 - 65,824,509 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Neoplasm Recurrence, Local (ISO)

Prostatic Neoplasms (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

B cell differentiation (ISO)

positive regulation of cell population proliferation (ISO)

Cellular Component

cytoplasm (ISO)

endoplasmic reticulum (ISO)

glutamatergic synapse (ISO)

perinuclear region of cytoplasm (ISO)

synapse (ISO)

Molecular Function

calcium ion binding (ISO)

identical protein binding (ISO)

protein binding (ISO)

protein homodimerization activity (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

TPD52
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	75,482,413 - 75,616,018 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666039	65,584,303 - 65,824,509 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

TPD52
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	80,031,082 - 80,171,564 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	80,034,745 - 80,231,232 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	80,943,317 - 81,083,799 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	81,109,658 - 81,246,391 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	8	81,110,303 - 81,246,324	NCBI
Celera	8	76,951,325 - 77,088,299 (-)	NCBI		Celera
Cytogenetic Map	8	q21.13	NCBI
HuRef	8	76,436,252 - 76,573,212 (-)	NCBI		HuRef
CHM1_1	8	80,999,297 - 81,135,937 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	8	80,462,421 - 80,603,125 (-)	NCBI		T2T-CHM13v2.0

Tpd52
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	8,991,590 - 9,069,824 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	8,990,653 - 9,069,783 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	8,926,530 - 9,005,393 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	8,925,593 - 9,004,723 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	8,929,436 - 9,004,515 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	8,912,509 - 8,987,588 (-)	NCBI		MGSCv36	mm8
Celera	3	8,932,906 - 9,011,073 (-)	NCBI		Celera
Cytogenetic Map	3	A1	NCBI
cM Map	3	2.23	NCBI

Tpd52
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	94,642,514 - 94,723,442 (+)	NCBI		GRCr8
mRatBN7.2	2	92,735,365 - 92,816,079 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	92,735,620 - 92,816,622 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	99,253,171 - 99,333,682 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	97,374,199 - 97,454,716 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	92,431,077 - 92,511,587 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	94,959,732 - 95,041,277 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	95,008,311 - 95,040,514 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	114,703,298 - 114,784,828 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	94,850,203 - 94,880,802 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	94,746,872 - 94,825,548 (+)	NCBI
Celera	2	88,371,535 - 88,402,143 (+)	NCBI		Celera
Cytogenetic Map	2	q23	NCBI

Tpd52
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955444	1,230,730 - 1,264,526 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955444	1,230,730 - 1,261,839 (+)	NCBI	ChiLan1.0	ChiLan1.0

TPD52
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	95,654,079 - 95,911,079 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	71,284,034 - 71,541,339 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	76,562,979 - 76,698,329 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	78,070,481 - 78,324,726 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

TPD52
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	29	27,418,239 - 27,524,919 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	29	27,419,736 - 27,525,336 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	29	27,692,919 - 27,800,319 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	29	27,542,727 - 27,650,638 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	29	27,542,727 - 27,651,067 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	29	27,595,932 - 27,704,524 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	29	27,627,261 - 27,734,743 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	29	27,983,550 - 28,092,220 (-)	NCBI		UU_Cfam_GSD_1.0

Tpd52
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	51,615,872 - 51,678,313 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936656	3,827,636 - 3,869,051 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936656	3,827,764 - 3,868,828 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TPD52
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	56,471,897 - 56,603,617 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	56,472,992 - 56,603,616 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	61,913,498 - 61,946,995 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Tpd52
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624744	11,099,769 - 11,201,758 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008000951	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008000952	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008000953	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008000954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008000955	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008000956	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008000957	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008000958	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008000959	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038000356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038000357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038000359	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038000360	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038000361	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038000362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_008000951 ⟹ XP_007999142

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	8	75,482,413 - 75,616,018 (-)	NCBI
Vero_WHO_p1.0	NW_023666039	65,584,303 - 65,717,914 (+)	NCBI

Sequence:

show sequence

ATGCAGAGAAAGGGCAGCTCCAAGGCCTCGGAGGAAACTTTTGATTTTATAAATAACTTGATGG
TGGAAGGCAAACGCCATCCCGGTTCCCAAGCAGGCTCCACGCAGCCTCCATGGCCGAGTCCATC
TCCTCGCCGTCCTCTTCCCTCCTCCCGGCCGACTTCCAGCCGGTGCGGGAATAGGGGCGCGCCC
GGCCCTCCTCGCGCTGCGCCGCCCGCGCCGACGTGGCGGAGCGCACAGGTCGGCCGGGTCAGGT
GGTTGGGTGACGCCCCGGGAAAGCGCTCCCGGCCGAGGGCGGGCGGCGCCGCCGCGCCCGACGC
CTCTGGGGGTGGGGACTTCGCGGGAGTCGCCGGCGGAGGCAAGGAGGAGCTCGGCGCGGCGCGG
CGCGGCGCGGGGCGGCGCGGCGGGCGATCCGAGCTGGGACGGGCTGCAGGCGGCAGGGGTGCAG
AGGACGCGAGGCGGCGGGCTGGAGACATGGACCGCGGCGAGCAAGGTCTGCTGAGAACAGAGCC
AGTCCCTGAGGAAGGAGAAGATGTTGCTGCCACCATCAGTGCCACAGAGACCCTCTCAGAAGAG
GAGCGGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAAATCCAGACTCTGTCTCAAG
TGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACA
GGAACTAAAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAG
ACATCTGAAACCTTGTCCCAGGCTGGACAGAAGGCCTCAGCTGCTTTTTCGTCTGTTGGCTCAG
TCATCACCAAAAAGCTGGAAGACGTAAAATTGCAAGCCTTTTCACATTCCTTTAGTATACGTTC
CATTCAGCATTCAATTAGCATGCCTGCTATGAGAAACTCCCCAACTTTTAAATCATTTGAAGAA
AAGGTCGAAAACTTAAAGTCTAAAGTAGGGGGAACCAAGCCTGCTGGTGGTGATTTTGGAGAAG
TCTTGAATTCGGCTGCAAATGCTAGTGCCACCACCACGGAGCCTCTTCCAGAACAGACACAGGA
GAGCCTGTGAGATTCCTACCTTTGTTCTGCTACCCACTGCCAGATGCTGCAAGCGAGGTCCAAG
CACATCTTGTCAACATGCATTGCCATGAATTTCTACCAGATGTGCTTTTATTTAGCTTTACATA
TTCCTTTGACCAAATAGTTTGTGGGTTAAACAAATGAAAATATCTTCAACTCTATTCCTGGGAA
ACACCCTTTAGTGTGCATTTATGTTCCTTTATTTAGGAAACACCGTCATAAAAACACCTATAGT
ACCTGGGGACATTCACTAGAATGATCTAAGAAGCTACAGATTGTCATAGTTGTTTTCTTACTTT
ACAAAATTGCTCCAGATCTGGAATGCCAGTTTGACCTTTGTCTTTATTTCCTTTTTTTCCCCCT
CTTTGAATCTCTGTATATTTGATTCTTAACTAAAATTGTTCTCTTAAATAATCTGAATCCTGGT
AATTAAAAGTTTGGGTATATTTTCTTTACCTCCAAGGGAAGAACTACCAGCTACAAAAAATATT
TTGGAATAAGCACTGTTTTGGTATAAGGTACATATTTTGGTTGAAGACACCAGACTGAAGTAAA
CAGCTGTGCATCCAATTTATTATAGTTTTGTAAGTAACAATATATAATCAAACTTCCTGGTGAC
TTGAGTGGAACCTCCTACATCCTTATTTATCACCGTTTATGACAGTAAACATTTCAGTGTATTG
TTTATTATACCACTTATATCAACTTATTTTTCACCAGGTTAAAATTTTAATTTCTACAAAATAA
CATTCTGAATCAAGCATACTGTATGATCAGTAGGCTGAACTATGAACACTGTCATCAATGTTCA
GTTCAAAAGCCTGAAAGTTTAGATCTAGAAGCTTGTGAAAATGACAATATCAATCACATTAGGG
GAACCATTGTTGTCTTCATTTAATCCATTTAGCACTATTTAAAATAAGCACACCAAGTTATATG
ACTAATATAACTTGAAAATTTTTTATACTGAGGGGTTGGTGATAACTCTTGAGGATGTAATGCA
TTAATAAAAATCAACTCATCATTTTCTACTTGTTTTCAATGTGTTGGAAATTGTAAAATGATAC
TGTAGAACCTGTCCCCTAATTTGAAAACTGACTGTCAGGGCTGAGTGAACCAAAGTCTCTAGAC
ATATTTGCATAAAGGCCAAGGTATTCTAATAACTACTTACTGAACACTACCACCTTTTCCTTAT
ACTGTATATGTTTATGGCCTACAATGTTGTATTTGTTATTTATTAAGTTGTGATTGTTTTATTG
TTTATGCCAAATGTTAATTGCCAAGCTTGGAGTGACTAAAGCATTTTTTAAAAGCATGGCTAGA
TTTACTTCAGTATAAATTATCTTATGAAAACCAAATTTTAAAAGCCACAAGTGTTGTTATAAAA
TAACATGCTGCCATTCTTGATTGCTAGAGCTTTTGTTAGTACTTTGGATGCAATTAAAACTATG
TGCTATCACATGTGAAAAGCTTAATAAATTCTGTCTATCAGTAGTA

hide sequence

RefSeq Acc Id:

XM_008000952 ⟹ XP_007999143

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	8	75,482,413 - 75,616,018 (-)	NCBI
Vero_WHO_p1.0	NW_023666039	65,584,303 - 65,717,914 (+)	NCBI

Sequence:

show sequence

ATGCAGAGAAAGGGCAGCTCCAAGGCCTCGGAGGAAACTTTTGATTTTATAAATAACTTGATGG
TGGAAGGCAAACGCCATCCCGGTTCCCAAGCAGGCTCCACGCAGCCTCCATGGCCGAGTCCATC
TCCTCGCCGTCCTCTTCCCTCCTCCCGGCCGACTTCCAGCCGGTGCGGGAATAGGGGCGCGCCC
GGCCCTCCTCGCGCTGCGCCGCCCGCGCCGACGTGGCGGAGCGCACAGGTCGGCCGGGTCAGGT
GGTTGGGTGACGCCCCGGGAAAGCGCTCCCGGCCGAGGGCGGGCGGCGCCGCCGCGCCCGACGC
CTCTGGGGGTGGGGACTTCGCGGGAGTCGCCGGCGGAGGCAAGGAGGAGCTCGGCGCGGCGCGG
CGCGGCGCGGGGCGGCGCGGCGGGCGATCCGAGCTGGGACGGGCTGCAGGCGGCAGGGGTGCAG
AGGACGCGAGGCGGCGGGCTGGAGACATGGACCGCGGCGAGCAAGGTCTGCTGAGAACAGAGCC
AGTCCCTGAGGAAGGAGAAGATGTTGCTGCCACCATCAGTGCCACAGAGACCCTCTCAGAAGAG
GAGCGGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAAATCCAGACTCTGTCTCAAG
TGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACA
GGAACTAAAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAG
ACATCTGAAACCTTGTCCCAGGCTGGACAGAAGGCCTCAGCTGCTTTTTCGTCTGTTGGCTCAG
TCATCACCAAAAAGCTGGAAGACGTAAATATACGTTCCATTCAGCATTCAATTAGCATGCCTGC
TATGAGAAACTCCCCAACTTTTAAATCATTTGAAGAAAAGGTCGAAAACTTAAAGTCTAAAGTA
GGGGGAACCAAGCCTGCTGGTGGTGATTTTGGAGAAGTCTTGAATTCGGCTGCAAATGCTAGTG
CCACCACCACGGAGCCTCTTCCAGAACAGACACAGGAGAGCCTGTGAGATTCCTACCTTTGTTC
TGCTACCCACTGCCAGATGCTGCAAGCGAGGTCCAAGCACATCTTGTCAACATGCATTGCCATG
AATTTCTACCAGATGTGCTTTTATTTAGCTTTACATATTCCTTTGACCAAATAGTTTGTGGGTT
AAACAAATGAAAATATCTTCAACTCTATTCCTGGGAAACACCCTTTAGTGTGCATTTATGTTCC
TTTATTTAGGAAACACCGTCATAAAAACACCTATAGTACCTGGGGACATTCACTAGAATGATCT
AAGAAGCTACAGATTGTCATAGTTGTTTTCTTACTTTACAAAATTGCTCCAGATCTGGAATGCC
AGTTTGACCTTTGTCTTTATTTCCTTTTTTTCCCCCTCTTTGAATCTCTGTATATTTGATTCTT
AACTAAAATTGTTCTCTTAAATAATCTGAATCCTGGTAATTAAAAGTTTGGGTATATTTTCTTT
ACCTCCAAGGGAAGAACTACCAGCTACAAAAAATATTTTGGAATAAGCACTGTTTTGGTATAAG
GTACATATTTTGGTTGAAGACACCAGACTGAAGTAAACAGCTGTGCATCCAATTTATTATAGTT
TTGTAAGTAACAATATATAATCAAACTTCCTGGTGACTTGAGTGGAACCTCCTACATCCTTATT
TATCACCGTTTATGACAGTAAACATTTCAGTGTATTGTTTATTATACCACTTATATCAACTTAT
TTTTCACCAGGTTAAAATTTTAATTTCTACAAAATAACATTCTGAATCAAGCATACTGTATGAT
CAGTAGGCTGAACTATGAACACTGTCATCAATGTTCAGTTCAAAAGCCTGAAAGTTTAGATCTA
GAAGCTTGTGAAAATGACAATATCAATCACATTAGGGGAACCATTGTTGTCTTCATTTAATCCA
TTTAGCACTATTTAAAATAAGCACACCAAGTTATATGACTAATATAACTTGAAAATTTTTTATA
CTGAGGGGTTGGTGATAACTCTTGAGGATGTAATGCATTAATAAAAATCAACTCATCATTTTCT
ACTTGTTTTCAATGTGTTGGAAATTGTAAAATGATACTGTAGAACCTGTCCCCTAATTTGAAAA
CTGACTGTCAGGGCTGAGTGAACCAAAGTCTCTAGACATATTTGCATAAAGGCCAAGGTATTCT
AATAACTACTTACTGAACACTACCACCTTTTCCTTATACTGTATATGTTTATGGCCTACAATGT
TGTATTTGTTATTTATTAAGTTGTGATTGTTTTATTGTTTATGCCAAATGTTAATTGCCAAGCT
TGGAGTGACTAAAGCATTTTTTAAAAGCATGGCTAGATTTACTTCAGTATAAATTATCTTATGA
AAACCAAATTTTAAAAGCCACAAGTGTTGTTATAAAATAACATGCTGCCATTCTTGATTGCTAG
AGCTTTTGTTAGTACTTTGGATGCAATTAAAACTATGTGCTATCACATGTGAAAAGCTTAATAA
ATTCTGTCTATCAGTAGTA

hide sequence

RefSeq Acc Id:

XM_008000953 ⟹ XP_007999144

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	8	75,482,413 - 75,616,018 (-)	NCBI
Vero_WHO_p1.0	NW_023666039	65,584,303 - 65,717,912 (+)	NCBI

Sequence:

show sequence

ATGCAGAGAAAGGGCAGCTCCAAGGCCTCGGAGGAAACTTTTGATTTTATAAATAACTTGATGG
TGGAAGGCAAACGCCATCCCGGTTCCCAAGCAGGCTCCACGCAGCCTCCATGGCCGAGTCCATC
TCCTCGCCGTCCTCTTCCCTCCTCCCGGCCGACTTCCAGCCGGTGCGGGAATAGGGGCGCGCCC
GGCCCTCCTCGCGCTGCGCCGCCCGCGCCGACGTGGCGGAGCGCACAGGTCGGCCGGGTCAGGT
GGTTGGGTGACGCCCCGGGAAAGCGCTCCCGGCCGAGGGCGGGCGGCGCCGCCGCGCCCGACGC
CTCTGGGGGTGGGGACTTCGCGGGAGTCGCCGGCGGAGGCAAGGAGGAGCTCGGCGCGGCGCGG
CGCGGCGCGGGGCGGCGCGGCGGGCGATCCGAGCTGGGACGGGCTGCAGGCGGCAGGGGTGCAG
AGGACGCGAGGCGGCGGGCTGGAGACATGGACCGCGGCGAGCAAGGTCTGCTGAGAACAGAGCC
AGTCCCTGAGGAAGGAGAAGATGTTGCTGCCACCATCAGTGCCACAGAGACCCTCTCAGAAGAG
GAGCGGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAAATCCAGACTCTGTCTCAAG
TGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACA
GGAACTAAAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAG
ACATCTGAAACCTTGTCCCAGGCTGGACAGAAGGCCTCAGCTGCTTTTTCGTCTGTTGGCTCAG
TCATCACCAAAAAGCTGGAAGACGTAAAAAACTCCCCAACTTTTAAATCATTTGAAGAAAAGGT
CGAAAACTTAAAGTCTAAAGTAGGGGGAACCAAGCCTGCTGGTGGTGATTTTGGAGAAGTCTTG
AATTCGGCTGCAAATGCTAGTGCCACCACCACGGAGCCTCTTCCAGAACAGACACAGGAGAGCC
TGTGAGATTCCTACCTTTGTTCTGCTACCCACTGCCAGATGCTGCAAGCGAGGTCCAAGCACAT
CTTGTCAACATGCATTGCCATGAATTTCTACCAGATGTGCTTTTATTTAGCTTTACATATTCCT
TTGACCAAATAGTTTGTGGGTTAAACAAATGAAAATATCTTCAACTCTATTCCTGGGAAACACC
CTTTAGTGTGCATTTATGTTCCTTTATTTAGGAAACACCGTCATAAAAACACCTATAGTACCTG
GGGACATTCACTAGAATGATCTAAGAAGCTACAGATTGTCATAGTTGTTTTCTTACTTTACAAA
ATTGCTCCAGATCTGGAATGCCAGTTTGACCTTTGTCTTTATTTCCTTTTTTTCCCCCTCTTTG
AATCTCTGTATATTTGATTCTTAACTAAAATTGTTCTCTTAAATAATCTGAATCCTGGTAATTA
AAAGTTTGGGTATATTTTCTTTACCTCCAAGGGAAGAACTACCAGCTACAAAAAATATTTTGGA
ATAAGCACTGTTTTGGTATAAGGTACATATTTTGGTTGAAGACACCAGACTGAAGTAAACAGCT
GTGCATCCAATTTATTATAGTTTTGTAAGTAACAATATATAATCAAACTTCCTGGTGACTTGAG
TGGAACCTCCTACATCCTTATTTATCACCGTTTATGACAGTAAACATTTCAGTGTATTGTTTAT
TATACCACTTATATCAACTTATTTTTCACCAGGTTAAAATTTTAATTTCTACAAAATAACATTC
TGAATCAAGCATACTGTATGATCAGTAGGCTGAACTATGAACACTGTCATCAATGTTCAGTTCA
AAAGCCTGAAAGTTTAGATCTAGAAGCTTGTGAAAATGACAATATCAATCACATTAGGGGAACC
ATTGTTGTCTTCATTTAATCCATTTAGCACTATTTAAAATAAGCACACCAAGTTATATGACTAA
TATAACTTGAAAATTTTTTATACTGAGGGGTTGGTGATAACTCTTGAGGATGTAATGCATTAAT
AAAAATCAACTCATCATTTTCTACTTGTTTTCAATGTGTTGGAAATTGTAAAATGATACTGTAG
AACCTGTCCCCTAATTTGAAAACTGACTGTCAGGGCTGAGTGAACCAAAGTCTCTAGACATATT
TGCATAAAGGCCAAGGTATTCTAATAACTACTTACTGAACACTACCACCTTTTCCTTATACTGT
ATATGTTTATGGCCTACAATGTTGTATTTGTTATTTATTAAGTTGTGATTGTTTTATTGTTTAT
GCCAAATGTTAATTGCCAAGCTTGGAGTGACTAAAGCATTTTTTAAAAGCATGGCTAGATTTAC
TTCAGTATAAATTATCTTATGAAAACCAAATTTTAAAAGCCACAAGTGTTGTTATAAAATAACA
TGCTGCCATTCTTGATTGCTAGAGCTTTTGTTAGTACTTTGGATGCAATTAAAACTATGTGCTA
TCACATGTGAAAAGCTTAATAAATTCTGTCTATCAGTAGTA

hide sequence

RefSeq Acc Id:

XM_038000356 ⟹ XP_037856284

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666039	65,584,303 - 65,824,509 (+)	NCBI

RefSeq Acc Id:

XM_038000357 ⟹ XP_037856285

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666039	65,635,562 - 65,824,509 (+)	NCBI

RefSeq Acc Id:

XM_038000359 ⟹ XP_037856287

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666039	65,584,303 - 65,824,509 (+)	NCBI

RefSeq Acc Id:

XM_038000360 ⟹ XP_037856288

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666039	65,584,303 - 65,824,509 (+)	NCBI

RefSeq Acc Id:

XM_038000361 ⟹ XP_037856289

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666039	65,723,177 - 65,824,509 (+)	NCBI

RefSeq Acc Id:

XM_038000362 ⟹ XP_037856290

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666039	65,723,174 - 65,824,509 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_007999142	(Get FASTA)	NCBI Sequence Viewer
	XP_007999143	(Get FASTA)	NCBI Sequence Viewer
	XP_007999144	(Get FASTA)	NCBI Sequence Viewer
	XP_037856284	(Get FASTA)	NCBI Sequence Viewer
	XP_037856285	(Get FASTA)	NCBI Sequence Viewer
	XP_037856287	(Get FASTA)	NCBI Sequence Viewer
	XP_037856288	(Get FASTA)	NCBI Sequence Viewer
	XP_037856289	(Get FASTA)	NCBI Sequence Viewer
	XP_037856290	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_007999144 ⟸ XM_008000953
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_007999143 ⟸ XM_008000952
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_007999142 ⟸ XM_008000951
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_037856284 ⟸ XM_038000356
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_037856287 ⟸ XM_038000359
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_037856288 ⟸ XM_038000360
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_037856285 ⟸ XM_038000357
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_037856290 ⟸ XM_038000362
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_037856289 ⟸ XM_038000361
- Peptide Label:	isoform X5

Additional Information

External Database Links

Database	Acc Id	Source(s)
NCBI Gene	TPD52	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD