CYP2S1 (cytochrome P450 family 2 subfamily S member 1) - Rat Genome Database

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Gene: CYP2S1 (cytochrome P450 family 2 subfamily S member 1) Chlorocebus sabaeus
Analyze
Symbol: CYP2S1
Name: cytochrome P450 family 2 subfamily S member 1
RGD ID: 18714873
Description: ENCODES a protein that exhibits hydro-lyase activity (ortholog); monooxygenase activity (ortholog); thromboxane-A synthase activity (ortholog); INVOLVED IN icosanoid metabolic process (ortholog); prostaglandin metabolic process (ortholog); retinoic acid metabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Carpenter Syndrome 2 (ortholog); congenital hypoplastic anemia (ortholog); FOUND IN endoplasmic reticulum (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: cytochrome P450 2S1; LOC103235511
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1635,512,559 - 35,521,775 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607313,709,718 - 13,726,006 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
CYP2S1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1635,512,559 - 35,521,775 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607313,709,718 - 13,726,006 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
CYP2S1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381941,193,219 - 41,207,539 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1941,193,210 - 41,207,539 (+)EnsemblGRCh38hg38GRCh38
GRCh371941,699,124 - 41,713,444 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361946,390,955 - 46,405,284 (+)NCBINCBI36Build 36hg18NCBI36
Build 341946,390,954 - 46,405,283NCBI
Celera1938,499,270 - 38,513,599 (+)NCBICelera
Cytogenetic Map19q13.2NCBI
HuRef1938,131,135 - 38,145,468 (+)NCBIHuRef
CHM1_11941,698,871 - 41,713,172 (+)NCBICHM1_1
T2T-CHM13v2.01944,013,177 - 44,028,420 (+)NCBIT2T-CHM13v2.0
Cyp2s1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39725,501,894 - 25,515,950 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl725,501,900 - 25,516,338 (-)EnsemblGRCm39 Ensembl
GRCm38725,802,469 - 25,816,525 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl725,802,475 - 25,816,913 (-)EnsemblGRCm38mm10GRCm38
MGSCv37726,587,495 - 26,601,549 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36725,511,236 - 25,525,290 (-)NCBIMGSCv36mm8
Celera720,411,576 - 20,425,630 (-)NCBICelera
Cytogenetic Map7A3NCBI
cM Map714.05NCBI
Cyp2s1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8190,437,741 - 90,453,073 (-)NCBIGRCr8
mRatBN7.2181,309,948 - 81,325,303 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl181,310,451 - 81,325,303 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx186,702,625 - 86,717,474 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0195,253,992 - 95,269,028 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0188,458,434 - 88,473,284 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0182,595,211 - 82,610,350 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl182,595,211 - 82,610,350 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0183,854,677 - 83,868,967 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4181,008,464 - 81,023,486 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1181,087,648 - 81,101,775 (-)NCBI
Celera175,748,428 - 75,763,207 (-)NCBICelera
Cytogenetic Map1q21NCBI
LOC102010839
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955555168,139 - 182,196 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955555167,634 - 183,572 (+)NCBIChiLan1.0ChiLan1.0
CYP2S1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22047,403,087 - 47,417,496 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11949,271,326 - 49,285,734 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01938,185,893 - 38,200,064 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11946,692,906 - 46,707,004 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1946,693,025 - 46,705,950 (+)Ensemblpanpan1.1panPan2
CYP2S1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11112,735,586 - 112,747,534 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1112,736,706 - 112,747,555 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1112,138,862 - 112,150,468 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01113,333,336 - 113,344,950 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11112,894,082 - 112,905,643 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01112,526,640 - 112,538,235 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01113,519,846 - 113,531,479 (-)NCBIUU_Cfam_GSD_1.0
CYP2S1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl649,221,763 - 49,235,330 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1649,221,361 - 49,235,335 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2644,925,122 - 44,935,474 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LOC101700677
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462490757,276 - 67,275 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462490757,749 - 67,274 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_037991729   ⟹   XP_037847657
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366607313,709,718 - 13,726,006 (+)NCBI
Protein Sequences
Protein RefSeqs XP_037847657 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_037847657   ⟸   XM_037991729


Additional Information

Database Acc Id Source(s)
NCBI Gene LOC103235511 ENTREZGENE
VGNC ID VGNC:83396 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-02-25 CYP2S1  cytochrome P450 family 2 subfamily S member 1  LOC103235511  cytochrome P450 2S1  Symbol and/or name change 5135510 APPROVED