KCNJ8 (potassium inwardly rectifying channel subfamily J member 8) - Rat Genome Database

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Gene: KCNJ8 (potassium inwardly rectifying channel subfamily J member 8) Chlorocebus sabaeus
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Symbol: KCNJ8
Name: potassium inwardly rectifying channel subfamily J member 8
RGD ID: 18711560
Description: ENCODES a protein that exhibits ATP binding (ortholog); ATP-activated inward rectifier potassium channel activity (ortholog); ATPase-coupled monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN action potential (ortholog); adaptive immune response (ortholog); apoptotic process (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Brugada syndrome (ortholog); Brugada syndrome 1 (ortholog); cardiac arrest (ortholog); FOUND IN glutamatergic synapse (ortholog); inward rectifying potassium channel (ortholog); presynapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ATP-sensitive inward rectifier potassium channel 8; potassium voltage-gated channel subfamily J member 8
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11121,624,963 - 21,634,940 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1121,624,970 - 21,634,042 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606913,508,221 - 13,518,244 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
action potential  (IEA,ISO)
adaptive immune response  (IEA,ISO)
apoptotic process  (IEA,ISO)
atrioventricular node cell differentiation  (IEA,ISO)
blood vessel development  (IEA,ISO)
calcium ion transmembrane transport  (IEA,ISO)
CAMKK-AMPK signaling cascade  (IEA,ISO)
cardiac pacemaker cell differentiation  (IEA,ISO)
cell population proliferation  (IEA,ISO)
circulatory system development  (IEA,ISO)
coronary vasculature development  (IEA,ISO)
defense response to virus  (IEA,ISO)
determination of adult lifespan  (IEA,ISO)
establishment of cell polarity  (IEA,ISO)
fat cell differentiation  (IEA,ISO)
fatty acid transport  (IEA,ISO)
fibroblast proliferation  (IEA,ISO)
gene expression  (IEA,ISO)
glutamate secretion, neurotransmission  (IEA,ISO)
heart development  (IEA,ISO)
heart morphogenesis  (IEA,ISO)
inflammatory response  (IEA,ISO)
inorganic cation transmembrane transport  (ISO)
kidney development  (ISO)
membrane repolarization during ventricular cardiac muscle cell action potential  (IEA)
microglial cell activation  (IEA,ISO)
monoatomic ion transmembrane transport  (IEA)
nervous system process  (IEA,ISO)
neuromuscular process  (IEA,ISO)
NLRP3 inflammasome complex assembly  (IEA,ISO)
p38MAPK cascade  (IEA,ISO)
potassium ion import across plasma membrane  (IEA,ISO)
potassium ion transmembrane transport  (IEA,ISO)
potassium ion transport  (IEA,ISO)
protein secretion  (IEA,ISO)
reactive gliosis  (IEA,ISO)
regulation of blood pressure  (IEA,ISO)
regulation of cation channel activity  (ISO)
regulation of heart rate  (IEA,ISO)
regulation of monoatomic ion transmembrane transport  (IEA)
regulation of presynaptic membrane potential  (IEA)
response to ATP  (IEA,ISO)
response to cytokine  (IEA,ISO)
response to endoplasmic reticulum stress  (IEA,ISO)
response to exogenous dsRNA  (IEA,ISO)
response to hypoxia  (IEA,ISO)
response to insulin  (IEA,ISO)
response to ischemia  (IEA,ISO)
response to lipopolysaccharide  (IEA,ISO)
response to resveratrol  (IEA,ISO)
response to stress  (IEA,ISO)
response to xenobiotic stimulus  (IEA,ISO)
synaptic assembly at neuromuscular junction  (IEA,ISO)
transmission of nerve impulse  (IEA,ISO)
vasculature development  (IEA,ISO)
vasodilation  (IEA,ISO)
ventricular cardiac muscle tissue development  (IEA,ISO)

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
acebutolol pharmacodynamics pathway   (ISO)
adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway  (ISO)
amiodarone pharmacodynamics pathway  (ISO)
amlodipine pharmacodynamics pathway  (ISO)
atenolol pharmacodynamics pathway  (ISO)
betaxolol pharmacodynamics pathway  (ISO)
bisoprolol pharmacodynamics pathway  (ISO)
bupranolol drug pathway  (ISO)
bupranolol pharmacodynamics pathway  (ISO)
carvedilol pharmacodynamics pathway  (ISO)
diltiazem pharmacodynamics pathway  (ISO)
disopyramide pharmacodynamics pathway  (ISO)
dobutamine pharmacodynamics pathway  (ISO)
esmolol pharmacodynamics pathway  (ISO)
flecainde pharmacodynamics pathway  (ISO)
fosphenytoin pharmacodynamics pathway  (ISO)
ibutilide pharmacodynamics pathway  (ISO)
isoprenaline pharmacodynamics pathway  (ISO)
isradipine pharmacodynamics pathway  (ISO)
levobunolol pharmacodynamics pathway  (ISO)
lidocaine pharmacodynamics pathway  (ISO)
metoprolol pharmacodynamics pathway  (ISO)
mexiletine pharmacodynamics pathway  (ISO)
nadolol pharmacodynamics pathway  (ISO)
nebivolol pharmacodynamics pathway  (ISO)
nifedipine pharmacodynamics pathway  (ISO)
nimodipine pharmacodynamics pathway  (ISO)
nisoldipine pharmacodynamics pathway  (ISO)
nitrendipine pharmacodynamics pathway  (ISO)
penbutolol pharmacodynamics pathway  (ISO)
phenytoin pharmacodynamics pathway  (ISO)
pindolol pharmacodynamics pathway  (ISO)
procainamide pharmacodynamics pathway  (ISO)
propranolol pharmacodynamics pathway  (ISO)
quinidine pharmacodynamics pathway  (ISO)
sotalol pharmacodynamics pathway  (ISO)
timolol pharmacodynamics pathway  (ISO)
verapamil pharmacodynamics pathway  (ISO)

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
KCNJ8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11121,624,963 - 21,634,940 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1121,624,970 - 21,634,042 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606913,508,221 - 13,518,244 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
KCNJ8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381221,764,955 - 21,774,706 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1221,764,955 - 21,775,600 (-)EnsemblGRCh38hg38GRCh38
GRCh371221,917,889 - 21,927,640 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361221,809,156 - 21,819,014 (-)NCBINCBI36Build 36hg18NCBI36
Build 341221,809,155 - 21,819,014NCBI
Celera1227,072,901 - 27,082,758 (-)NCBICelera
Cytogenetic Map12p12.1NCBI
HuRef1221,691,442 - 21,701,306 (-)NCBIHuRef
CHM1_11221,883,171 - 21,893,034 (-)NCBICHM1_1
T2T-CHM13v2.01221,643,637 - 21,653,388 (-)NCBIT2T-CHM13v2.0
Kcnj8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396142,510,563 - 142,517,340 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6142,510,563 - 142,517,340 (-)EnsemblGRCm39 Ensembl
GRCm386142,564,837 - 142,571,614 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6142,564,837 - 142,571,614 (-)EnsemblGRCm38mm10GRCm38
MGSCv376142,513,459 - 142,519,876 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366142,522,161 - 142,528,581 (-)NCBIMGSCv36mm8
Celera6145,626,686 - 145,633,104 (-)NCBICelera
Cytogenetic Map6G2NCBI
cM Map674.31NCBI
Kcnj8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84177,240,692 - 177,246,548 (-)NCBIGRCr8
mRatBN7.24175,508,908 - 175,515,829 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4175,508,912 - 175,515,603 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4181,804,515 - 181,810,357 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04177,588,783 - 177,594,629 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04176,209,354 - 176,215,202 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04176,783,287 - 176,789,143 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4176,782,498 - 176,789,304 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04240,996,986 - 241,003,081 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44180,144,084 - 180,149,935 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14180,388,422 - 180,395,042 (-)NCBI
Celera4164,042,167 - 164,048,023 (-)NCBICelera
Cytogenetic Map4q44NCBI
Kcnj8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541317,364,213 - 17,371,255 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541317,364,447 - 17,371,255 (-)NCBIChiLan1.0ChiLan1.0
KCNJ8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21075,026,276 - 75,036,939 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11275,022,673 - 75,033,355 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01264,522,172 - 64,532,848 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11267,126,584 - 67,137,128 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1267,127,263 - 67,137,128 (+)Ensemblpanpan1.1panPan2
KCNJ8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12725,368,565 - 25,375,754 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2725,368,810 - 25,375,009 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2720,985,001 - 20,992,186 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02725,588,424 - 25,595,600 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2725,588,452 - 25,595,598 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12725,386,897 - 25,394,078 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02725,410,445 - 25,417,631 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02721,155,847 - 21,163,033 (-)NCBIUU_Cfam_GSD_1.0
Kcnj8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494587,202,938 - 87,209,604 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365485,125,555 - 5,133,078 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365485,125,583 - 5,132,490 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KCNJ8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl551,696,188 - 51,703,813 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1551,695,927 - 51,704,402 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2554,978,919 - 54,987,396 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Kcnj8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475216,939,384 - 16,946,723 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475216,939,289 - 16,945,692 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20

Sequence


Ensembl Acc Id: ENSCSAT00000005989   ⟹   ENSCSAP00000004199
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl1121,624,970 - 21,634,042 (-)Ensembl
RefSeq Acc Id: XM_007967876   ⟹   XP_007966067
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11121,624,963 - 21,634,940 (-)NCBI
Vero_WHO_p1.0NW_02366606913,508,221 - 13,518,244 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007966067 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000004199
  ENSCSAP00000004199.1
RefSeq Acc Id: XP_007966067   ⟸   XM_007967876
- UniProtKB: A0A0D9R6G0 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCSAP00000004199   ⟸   ENSCSAT00000005989


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000007933 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000005989.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.70 UniProtKB/TrEMBL
  2.60.40.1400 UniProtKB/TrEMBL
InterPro Ig_E-set UniProtKB/TrEMBL
  IRK_C UniProtKB/TrEMBL
  K_chnl_inward-rec_Kir UniProtKB/TrEMBL
  K_chnl_inward-rec_Kir6.1 UniProtKB/TrEMBL
  K_chnl_inward-rec_Kir_cyto UniProtKB/TrEMBL
  Kir_TM UniProtKB/TrEMBL
KEGG Report csab:103218739 UniProtKB/TrEMBL
NCBI Gene KCNJ8 ENTREZGENE
PANTHER PTHR11767 UniProtKB/TrEMBL
  PTHR11767:SF11 UniProtKB/TrEMBL
Pfam IRK UniProtKB/TrEMBL
  IRK_C UniProtKB/TrEMBL
PIRSF GIRK_kir UniProtKB/TrEMBL
PRINTS KIR61CHANNEL UniProtKB/TrEMBL
  KIRCHANNEL UniProtKB/TrEMBL
Superfamily-SCOP SSF81296 UniProtKB/TrEMBL
  Voltage-gated potassium channels UniProtKB/TrEMBL
UniProt A0A0D9R6G0 ENTREZGENE, UniProtKB/TrEMBL