WTAP (WT1 associated protein) - Rat Genome Database

Name: WTAP
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: WTAP (WT1 associated protein) Chlorocebus sabaeus

Analyze

Symbol:

WTAP

Name:

WT1 associated protein

RGD ID:

18709519

Description:

ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mRNA processing (inferred); regulation of alternative mRNA splicing, via spliceosome (inferred); RNA splicing (inferred); ASSOCIATED WITH 3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); nuclear speck (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

LOC103240819; pre-mRNA-splicing regulator WTAP; Wilms tumor 1 associated protein

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	WTAP (WT1 associated protein)	NCBI	Ortholog
Mus musculus (house mouse):	Wtap (WT1 associating protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Wtap (WT1 associated protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Wtap (WT1 associated protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	WTAP (WT1 associated protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	WTAP (WT1 associated protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Wtap (WT1 associated protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	WTAP (WT1 associated protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Wtap (WT1 associated protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	87,328,228 - 87,357,868 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666040	59,727,150 - 59,756,923 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome (ISO)

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mRNA processing (IEA)

regulation of alternative mRNA splicing, via spliceosome (IEA)

RNA splicing (IEA)

Cellular Component

cytoplasm (ISO)

nuclear membrane (ISO)

nuclear speck (ISO)

nucleoplasm (ISO)

nucleus (IEA)

RNA N6-methyladenosine methyltransferase complex (ISO)

Molecular Function

identical protein binding (ISO)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

WTAP
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	87,328,228 - 87,357,868 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666040	59,727,150 - 59,756,923 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

WTAP
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	159,726,693 - 159,756,319 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	159,725,585 - 159,756,319 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	160,148,149 - 160,177,351 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	160,068,142 - 160,097,341 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	6	160,794,229 - 160,823,430 (+)	NCBI		Celera
Cytogenetic Map	6	q25.3	NCBI
HuRef	6	157,617,339 - 157,646,781 (+)	NCBI		HuRef
CHM1_1	6	160,410,378 - 160,439,680 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	160,967,457 - 161,001,943 (+)	NCBI		T2T-CHM13v2.0

Wtap
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	13,185,686 - 13,211,430 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	13,185,683 - 13,213,056 (-)	Ensembl		GRCm39 Ensembl
GRCm38	17	12,966,799 - 12,992,543 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	12,966,796 - 12,994,169 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	13,159,665 - 13,185,405 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	12,815,617 - 12,835,478 (-)	NCBI		MGSCv36	mm8
Celera	17	12,998,333 - 13,025,542 (-)	NCBI		Celera
Cytogenetic Map	17	A1	NCBI
cM Map	17	8.73	NCBI

Wtap
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	50,070,973 - 50,096,074 (+)	NCBI		GRCr8
mRatBN7.2	1	47,665,965 - 47,691,067 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	47,665,965 - 47,691,065 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	48,214,813 - 48,239,914 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	54,202,806 - 54,227,929 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	48,290,329 - 48,315,430 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	47,942,500 - 47,967,633 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	47,942,500 - 47,967,631 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	51,781,701 - 51,806,726 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	41,891,437 - 41,917,254 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	43,351,111 - 43,376,211 (+)	NCBI		Celera
Cytogenetic Map	1	q11	NCBI

Wtap
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955439	21,146,206 - 21,182,486 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955439	21,149,970 - 21,174,479 (-)	NCBI	ChiLan1.0	ChiLan1.0

WTAP
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	179,824,106 - 179,854,540 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	177,729,160 - 177,759,590 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	157,609,779 - 157,639,122 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	162,620,947 - 162,650,683 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	162,621,842 - 162,650,683 (+)	Ensembl	panpan1.1		panPan2

WTAP
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	48,976,523 - 49,004,536 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	48,976,499 - 49,003,961 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	49,818,344 - 49,846,503 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	49,160,699 - 49,189,019 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	49,160,693 - 49,189,019 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	49,043,176 - 49,071,381 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	48,914,192 - 48,942,472 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	49,529,308 - 49,557,423 (+)	NCBI		UU_Cfam_GSD_1.0
UU_Cfam_GSD_1.0	1	49,480,343 - 49,508,532 (+)	NCBI		UU_Cfam_GSD_1.0

Wtap
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	143,966,743 - 143,997,439 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936489	11,227,156 - 11,249,818 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936489	11,222,513 - 11,249,432 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

WTAP
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	7,622,547 - 7,651,961 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	7,622,544 - 7,651,732 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	9,419,861 - 9,447,657 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Wtap
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624855	3,205,543 - 3,235,979 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624855	3,205,543 - 3,236,134 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008007722	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008007723	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008007724	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008007726	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008007727	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_008007722 ⟹ XP_008005913

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	13	87,328,513 - 87,357,868 (+)	NCBI
Vero_WHO_p1.0	NW_023666040	59,727,497 - 59,756,923 (+)	NCBI

Sequence:

show sequence

CCTCCCTCAGCGCCATTTTGTGGCAGCGAGACCCACAAATAAAGGGGAGCGCTGGGGTTGCGGC
GGGACTAGGAGTGCGGCGGGGCAGGCGCCAGTGCTGTCCGGCTGCGCGGGGGCCCGGGGGGCCC
GGGCGGCAGGGCAAGCAGCGCGGCCTCGGCCTATGCGACTGGCGGCGCCGGCGCGGCTTCTGCC
TGAAGAGGATTCAAGATGACCAACGAAGAACCTCTTCCCAAGAAGGTTCGACTGAGTGAAACAG
ACTTCAAAGTTATGGCAAGAGATGAGTTAATTCTAAGATGGAAACAATATGAAGCATATGTACA
AGCTTTGGAGGGCAAGTACACAGATCTTAACTCTAATGATGTAACTGGCCTAAGAGAGTCTGAA
GAAAAACTAAAGCAACAACAGCAGGAGTCTGCACGCAGGGAAAACATCCTTGTAATGCGACTAG
CAACCAAGGAACAAGAGATGCAAGAGTGTACTACTCAAATCCAGTACCTCAAGCAAGTCCAGCA
GCCGAGCGTTGCCCAACTGAGATCAACAATGGTAGACCCAGCGATCAACTTGTTTTTCCTAAAA
ATGAAAGGTGAACTGGAACAGACTAAAGACAAACTGGAACAAGCCCAAAATGAACTGAGTGCCT
GGAAGTTTACGCCTGATAGCCAAACAGGGAAAAAGTTAATGGCGAAGTGTCGAATGCTTATCCA
GGAGAATCAAGAGCTTGGAAGGCAGCTGTCCCAGGGACGTATTGCACAACTTGAAGCAGAGTTG
GCTTTACAGAAGAAATATAGTGAGGAGCTTAAAAGCAGTCAGGATGAACTGAATGACTTCATCA
TCCAGCTTGATGAAGAAGTAGAGGGTATGCAGAGTACCATTCTCGTTCTGCAGCAGCAGCTGAA
GGAGACACGCCAGCAGTTGGCTCAGTACCAGCAGCAGCAGTCTCAGGCCTCTGCCCCAAGTACC
AGCAGGACTACAGCTTCTGAACCTGTAGAACAGTTGGAGGCCACAAGTAAAGACTGCAGTCGTC
TGACAAACGGACCAAGTAATGGTAGCTCCTCCCGCCAGAGGACGTCTGGGTCTGGATTTCACAG
GGAGGGCAACACAACCGAAGATGACTTTCCTTCTTCTCCAGGGAATGGTAATAAGTCCTCCAAC
AGCTCAGAGGAGAGAACTGGCAGAGGAGGTAGTGGTTACATAAATCAACTCAGTGCGGGGTATG
AAAGTGTAGACTCTCCCACGGGCAGTGAAAACTCTCTCACACACCAATCAAATGACACAGACTC
CAATCATGACCCTCAAGAGGAGAAAGCAGTGAGTGGGAAAGGTAACCGAACTGTGGGTTCCCGC
CACGTTCAGAATGGCTTGGACTCAAGTGTAAATGTACAGGGTTCAGTTTTGTAATATTTTTTCA
GCAAATTTTTATACAGTGTCATTTAATTTGGGAGAGGATACTGTCCAGAAAATTAATGCAAACT
TTTGTCACAATTTGCCTTTTTGTGGGTGTACGTTTTGGTTTTTTGTTGTTGTTTTCTCTTTGTT
TTTGTTTTTTGTTTTTTTTCTTTTTTTTTTTTTCTTTTTTTTTTTTTTCTTTTTTTTGCTTCAA
TACCTCTGCCACTTTGGAAATTGTTAACAGTTAATTACTTTGAATGTTGCTAAAAGAACATTTT
GTGTAGGGTCAAGTTATTTTTATATGAGTTAATGTGAAATTGTAAATGGAAATTTTTCCTTAAA
ATATAACACAATGACGTCTGTATAAATCTATGTCTGTTTAGAACCTGTGCTGTGTAAGGGCATT
CTTCCTCATGCTGTTACTGTACTTATGCACCATTCAGACTTGTTAGAGTAGATGTGGGTTTATG
ACTGCCAAGTTTGCCCAGTACAGTAGTTTTTTATCACTAAAAGTTGGACTCATTGATGGAGTCC
TGTAGTAGTTTCAGTGTTAGATACAGTTTTTTCCACCATACATCTGTGCATTTTCTCTTTAGGT
GACTGAATGTTTAAGAAATTTGTGTGCATAGTTACTCAGTTTTTATGAACTGTTGTATCCTGTT
AATGCATATTGCTCTGTGACTCCAGTATATCTTACCTGTACTGACCAAACCTAAATAAAGATTT
TTATTGTAACTCCTTAA

hide sequence

RefSeq Acc Id:

XM_008007723 ⟹ XP_008005914

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	13	87,328,228 - 87,357,868 (+)	NCBI
Vero_WHO_p1.0	NW_023666040	59,727,150 - 59,756,923 (+)	NCBI

Sequence:

show sequence

GCTGCTCCACTGCGCCTCGAGGCCCCGATCGCGCTAGGCTGGCGGCCTCCCTCCCTTCACCTTT
CCTCTCCTGGCAGGGCCCGGCGGCGGGCGAGTGACTGCGGCCACGCCTGAAAGGCGACTCTTCT
GATTCAAGATGACCAACGAAGAACCTCTTCCCAAGAAGGTTCGACTGAGTGAAACAGACTTCAA
AGTTATGGCAAGAGATGAGTTAATTCTAAGATGGAAACAATATGAAGCATATGTACAAGCTTTG
GAGGGCAAGTACACAGATCTTAACTCTAATGATGTAACTGGCCTAAGAGAGTCTGAAGAAAAAC
TAAAGCAACAACAGCAGGAGTCTGCACGCAGGGAAAACATCCTTGTAATGCGACTAGCAACCAA
GGAACAAGAGATGCAAGAGTGTACTACTCAAATCCAGTACCTCAAGCAAGTCCAGCAGCCGAGC
GTTGCCCAACTGAGATCAACAATGGTAGACCCAGCGATCAACTTGTTTTTCCTAAAAATGAAAG
GTGAACTGGAACAGACTAAAGACAAACTGGAACAAGCCCAAAATGAACTGAGTGCCTGGAAGTT
TACGCCTGATAGCCAAACAGGGAAAAAGTTAATGGCGAAGTGTCGAATGCTTATCCAGGAGAAT
CAAGAGCTTGGAAGGCAGCTGTCCCAGGGACGTATTGCACAACTTGAAGCAGAGTTGGCTTTAC
AGAAGAAATATAGTGAGGAGCTTAAAAGCAGTCAGGATGAACTGAATGACTTCATCATCCAGCT
TGATGAAGAAGTAGAGGGTATGCAGAGTACCATTCTCGTTCTGCAGCAGCAGCTGAAGGAGACA
CGCCAGCAGTTGGCTCAGTACCAGCAGCAGCAGTCTCAGGCCTCTGCCCCAAGTACCAGCAGGA
CTACAGCTTCTGAACCTGTAGAACAGTTGGAGGCCACAAGTAAAGACTGCAGTCGTCTGACAAA
CGGACCAAGTAATGGTAGCTCCTCCCGCCAGAGGACGTCTGGGTCTGGATTTCACAGGGAGGGC
AACACAACCGAAGATGACTTTCCTTCTTCTCCAGGGAATGGTAATAAGTCCTCCAACAGCTCAG
AGGAGAGAACTGGCAGAGGAGGTAGTGGTTACATAAATCAACTCAGTGCGGGGTATGAAAGTGT
AGACTCTCCCACGGGCAGTGAAAACTCTCTCACACACCAATCAAATGACACAGACTCCAATCAT
GACCCTCAAGAGGAGAAAGCAGTGAGTGGGAAAGGTAACCGAACTGTGGGTTCCCGCCACGTTC
AGAATGGCTTGGACTCAAGTGTAAATGTACAGGGTTCAGTTTTGTAATATTTTTTCAGCAAATT
TTTATACAGTGTCATTTAATTTGGGAGAGGATACTGTCCAGAAAATTAATGCAAACTTTTGTCA
CAATTTGCCTTTTTGTGGGTGTACGTTTTGGTTTTTTGTTGTTGTTTTCTCTTTGTTTTTGTTT
TTTGTTTTTTTTCTTTTTTTTTTTTTCTTTTTTTTTTTTTTCTTTTTTTTGCTTCAATACCTCT
GCCACTTTGGAAATTGTTAACAGTTAATTACTTTGAATGTTGCTAAAAGAACATTTTGTGTAGG
GTCAAGTTATTTTTATATGAGTTAATGTGAAATTGTAAATGGAAATTTTTCCTTAAAATATAAC
ACAATGACGTCTGTATAAATCTATGTCTGTTTAGAACCTGTGCTGTGTAAGGGCATTCTTCCTC
ATGCTGTTACTGTACTTATGCACCATTCAGACTTGTTAGAGTAGATGTGGGTTTATGACTGCCA
AGTTTGCCCAGTACAGTAGTTTTTTATCACTAAAAGTTGGACTCATTGATGGAGTCCTGTAGTA
GTTTCAGTGTTAGATACAGTTTTTTCCACCATACATCTGTGCATTTTCTCTTTAGGTGACTGAA
TGTTTAAGAAATTTGTGTGCATAGTTACTCAGTTTTTATGAACTGTTGTATCCTGTTAATGCAT
ATTGCTCTGTGACTCCAGTATATCTTACCTGTACTGACCAAACCTAAATAAAGATTTTTATTGT
AACTCCTTAA

hide sequence

RefSeq Acc Id:

XM_008007724 ⟹ XP_008005915

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	13	87,328,513 - 87,350,236 (+)	NCBI
Vero_WHO_p1.0	NW_023666040	59,727,497 - 59,749,393 (+)	NCBI

Sequence:

show sequence

CCTCCCTCAGCGCCATTTTGTGGCAGCGAGACCCACAAATAAAGGGGAGCGCTGGGGTTGCGGC
GGGACTAGGAGTGCGGCGGGGCAGGCGCCAGTGCTGTCCGGCTGCGCGGGGGCCCGGGGGGCCC
GGGCGGCAGGGCAAGCAGCGCGGCCTCGGCCTATGCGACTGGCGGCGCCGGCGCGGCTTCTGCC
TGAAGAGGATTCAAGATGACCAACGAAGAACCTCTTCCCAAGAAGGTTCGACTGAGTGAAACAG
ACTTCAAAGTTATGGCAAGAGATGAGTTAATTCTAAGATGGAAACAATATGAAGCATATGTACA
AGCTTTGGAGGGCAAGTACACAGATCTTAACTCTAATGATGTAACTGGCCTAAGAGAGTCTGAA
GAAAAACTAAAGCAACAACAGCAGGAGTCTGCACGCAGGGAAAACATCCTTGTAATGCGACTAG
CAACCAAGGAACAAGAGATGCAAGAGTGTACTACTCAAATCCAGTACCTCAAGCAAGTCCAGCA
GCCGAGCGTTGCCCAACTGAGATCAACAATGGTAGACCCAGCGATCAACTTGTTTTTCCTAAAA
ATGAAAGGTGAACTGGAACAGACTAAAGACAAACTGGAACAAGCCCAAAATGAACTGAGTGCCT
GGAAGTTTACGCCTGATAGAGGCCTGATGGCGTCGGACTATTCCGAAGAAGTGGCCACCTCCGA
AAAATTCCCCTTCTAGAACATGTAGACACTTGAGAAATGTTTCTGTTTGAAGAAAATAGAGGGA
GAAACAGAAGTCTTAAGTCTGTGGCACACTGTGTCTTCAGACAGTTTGAAGGAATGAAAACCTA
GAGATTTTAAATCATGAATTGAACATGTAAAATTCCAGTAAAATGTAAAAATGGAATATGCATC
GCTCTTAACCTTGAGCATAGTGACTTAGAGACACTGTGTATCAGTTTTGCCAATAAGACTGTGG
ACTTCATGATTGTTGTTGAACTTCTGGGTCAAAACTCAAATGAGGTGAATTTTGCCTTTAAAGG
GTTTATTTGCTGAGAACCAACTTTTAATAGTCACGAGAGAATCAAATAATAGATGTCCGTACAA
GTAGCGCATATATTTAACCATTTAGTTTGGGGCTCTATATTACTTGCTTGAGCCTTAATCAATG
TGGTTTTATTCAATGGTTTGTTCTTTGAATGGTTGCAAATCTGTAGATTATCTTACTGAGGACT
GTACAAACATGAAGGTGTGGTATCAAACTTCAGGTTGAAACTGTTTGAAGCATTATAAACATTC
ATTTCACAACTAGATTGTATAAGGATATTAGCTGTGATGAGACTCACTGCATTATTTTTTTAGT
GAATTTTATGAAATCCCCATTCCATTCAACAGGCACATGTTTAAAAGAGCATTGTCGTTGGTGT
TAATGGGGGAATGTGTTCCTTCATTGTATTTGGGCCTTTTGTATTGCACTCTTGATATTAAATT
AAATGTGCCTTGAAATA

hide sequence

RefSeq Acc Id:

XM_008007726 ⟹ XP_008005917

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	13	87,328,228 - 87,350,236 (+)	NCBI
Vero_WHO_p1.0	NW_023666040	59,727,150 - 59,749,393 (+)	NCBI

Sequence:

show sequence

GCTGCTCCACTGCGCCTCGAGGCCCCGATCGCGCTAGGCTGGCGGCCTCCCTCCCTTCACCTTT
CCTCTCCTGGCAGGGCCCGGCGGCGGGCGAGTGACTGCGGCCACGCCTGAAAGGCGACTCTTCT
GATTCAAGATGACCAACGAAGAACCTCTTCCCAAGAAGGTTCGACTGAGTGAAACAGACTTCAA
AGTTATGGCAAGAGATGAGTTAATTCTAAGATGGAAACAATATGAAGCATATGTACAAGCTTTG
GAGGGCAAGTACACAGATCTTAACTCTAATGATGTAACTGGCCTAAGAGAGTCTGAAGAAAAAC
TAAAGCAACAACAGCAGGAGTCTGCACGCAGGGAAAACATCCTTGTAATGCGACTAGCAACCAA
GGAACAAGAGATGCAAGAGTGTACTACTCAAATCCAGTACCTCAAGCAAGTCCAGCAGCCGAGC
GTTGCCCAACTGAGATCAACAATGGTAGACCCAGCGATCAACTTGTTTTTCCTAAAAATGAAAG
GTGAACTGGAACAGACTAAAGACAAACTGGAACAAGCCCAAAATGAACTGAGTGCCTGGAAGTT
TACGCCTGATAGAGGCCTGATGGCGTCGGACTATTCCGAAGAAGTGGCCACCTCCGAAAAATTC
CCCTTCTAGAACATGTAGACACTTGAGAAATGTTTCTGTTTGAAGAAAATAGAGGGAGAAACAG
AAGTCTTAAGTCTGTGGCACACTGTGTCTTCAGACAGTTTGAAGGAATGAAAACCTAGAGATTT
TAAATCATGAATTGAACATGTAAAATTCCAGTAAAATGTAAAAATGGAATATGCATCGCTCTTA
ACCTTGAGCATAGTGACTTAGAGACACTGTGTATCAGTTTTGCCAATAAGACTGTGGACTTCAT
GATTGTTGTTGAACTTCTGGGTCAAAACTCAAATGAGGTGAATTTTGCCTTTAAAGGGTTTATT
TGCTGAGAACCAACTTTTAATAGTCACGAGAGAATCAAATAATAGATGTCCGTACAAGTAGCGC
ATATATTTAACCATTTAGTTTGGGGCTCTATATTACTTGCTTGAGCCTTAATCAATGTGGTTTT
ATTCAATGGTTTGTTCTTTGAATGGTTGCAAATCTGTAGATTATCTTACTGAGGACTGTACAAA
CATGAAGGTGTGGTATCAAACTTCAGGTTGAAACTGTTTGAAGCATTATAAACATTCATTTCAC
AACTAGATTGTATAAGGATATTAGCTGTGATGAGACTCACTGCATTATTTTTTTAGTGAATTTT
ATGAAATCCCCATTCCATTCAACAGGCACATGTTTAAAAGAGCATTGTCGTTGGTGTTAATGGG
GGAATGTGTTCCTTCATTGTATTTGGGCCTTTTGTATTGCACTCTTGATATTAAATTAAATGTG
CCTTGAAATA

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RefSeq Acc Id:

XM_008007727 ⟹ XP_008005918

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	13	87,328,228 - 87,350,236 (+)	NCBI
Vero_WHO_p1.0	NW_023666040	59,727,150 - 59,749,393 (+)	NCBI

Sequence:

show sequence

GCTGCTCCACTGCGCCTCGAGGCCCCGATCGCGCTAGGCTGGCGGCCTCCCTCCCTTCACCTTT
CCTCTCCTGGCAGGGCCCGGCGGCGGGCGAGTGACTGCGGCCACGCCTGAAAGGCGACTCTTCT
GATTCAAGATGACCAACGAAGAACCTCTTCCCAAGAAGGTTCGACTGAGTGAAACAGACTTCAA
AGTTATGGCAAGAGATGAGTTAATTCTAAGATGGAAACAATATGAAGCATATGTACAAGCTTTG
GAGGGCAAGTACACAGATCTTAACTCTAATGATGTAACTGGCCTAAGAGAGTCTGAAGAAAAAC
TAAAGCAACAACAGCAGGAGTCTGCACGCAGGGAAAACATCCTTGTAATGCGACTAGCAACCAA
GGAACAAGAGATGCAAGAGTGTACTACTCAAATCCAGTACCTCAAGCAAGTCCAGCAGCCGAGC
GTTGCCCAACTGAGATCAACAATGGTAGACCCAGCGATCAACTTGTTTTTCCTAAAAATGAAAG
GTGAACTGGAACAGACTAAAGACAAACTGGAACAAGCCCAAAATGAACTGAGTGCCTGGAAGTT
TACGCCTGATAGGTAAACAAATCATACTCCCCAGTCAAGACTTCCCTGACAGTCCCACTACGAG
AAAGCTGTGGTGGGACAGCCAAGTACTCGTTTCCACACCAAGACTCAGACTTTTTGAGCCAAAA
AAAGCCACATTCTTACACTGTCCAGCTTGTAATGGTTAATGTAAAACTTACCAGATGAACCTTG
TGTTTCAGCTTTTTTCTTTTCCCCTTCCCCTTGCTTCAGAGGCCTGATGGCGTCGGACTATTCC
GAAGAAGTGGCCACCTCCGAAAAATTCCCCTTCTAGAACATGTAGACACTTGAGAAATGTTTCT
GTTTGAAGAAAATAGAGGGAGAAACAGAAGTCTTAAGTCTGTGGCACACTGTGTCTTCAGACAG
TTTGAAGGAATGAAAACCTAGAGATTTTAAATCATGAATTGAACATGTAAAATTCCAGTAAAAT
GTAAAAATGGAATATGCATCGCTCTTAACCTTGAGCATAGTGACTTAGAGACACTGTGTATCAG
TTTTGCCAATAAGACTGTGGACTTCATGATTGTTGTTGAACTTCTGGGTCAAAACTCAAATGAG
GTGAATTTTGCCTTTAAAGGGTTTATTTGCTGAGAACCAACTTTTAATAGTCACGAGAGAATCA
AATAATAGATGTCCGTACAAGTAGCGCATATATTTAACCATTTAGTTTGGGGCTCTATATTACT
TGCTTGAGCCTTAATCAATGTGGTTTTATTCAATGGTTTGTTCTTTGAATGGTTGCAAATCTGT
AGATTATCTTACTGAGGACTGTACAAACATGAAGGTGTGGTATCAAACTTCAGGTTGAAACTGT
TTGAAGCATTATAAACATTCATTTCACAACTAGATTGTATAAGGATATTAGCTGTGATGAGACT
CACTGCATTATTTTTTTAGTGAATTTTATGAAATCCCCATTCCATTCAACAGGCACATGTTTAA
AAGAGCATTGTCGTTGGTGTTAATGGGGGAATGTGTTCCTTCATTGTATTTGGGCCTTTTGTAT
TGCACTCTTGATATTAAATTAAATGTGCCTTGAAATA

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Protein Sequences


Protein RefSeqs	XP_008005913	(Get FASTA)	NCBI Sequence Viewer
	XP_008005914	(Get FASTA)	NCBI Sequence Viewer
	XP_008005915	(Get FASTA)	NCBI Sequence Viewer
	XP_008005917	(Get FASTA)	NCBI Sequence Viewer
	XP_008005918	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000008773.1

RefSeq Acc Id:	XP_008005914 ⟸ XM_008007723
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RJI4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_008005918 ⟸ XM_008007727
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_008005917 ⟸ XM_008007726
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_008005913 ⟸ XM_008007722
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RJI4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_008005915 ⟸ XM_008007724
- Peptide Label:	isoform X2

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000012594	UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000010683.1	UniProtKB/TrEMBL
InterPro	WTAP	UniProtKB/TrEMBL
NCBI Gene	WTAP	ENTREZGENE
PANTHER	PRE-MRNA-SPLICING REGULATOR WTAP	UniProtKB/TrEMBL
	WILMS' TUMOR 1-ASSOCIATING PROTEIN	UniProtKB/TrEMBL
Pfam	Wtap	UniProtKB/TrEMBL
UniProt	A0A0D9RJI4	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2022-08-09	WTAP	WT1 associated protein	LOC103240819	WT1 associated protein	Symbol and/or name change	5135510	APPROVED
2020-12-08	LOC103240819	WT1 associated protein	WTAP	WT1 associated protein	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar