MRFAP1 (Morf4 family associated protein 1)

Gene: MRFAP1 (Morf4 family associated protein 1) Chlorocebus sabaeus

Analyze

Symbol:

MRFAP1

Name:

Morf4 family associated protein 1

RGD ID:

18655058

Description:

ASSOCIATED WITH genetic disease (ortholog); FOUND IN nucleoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

MORF4 family-associated protein 1

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	27	42,763,097 - 42,765,216 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	27	42,763,302 - 42,764,461 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	89,570,229 - 89,572,398 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

nucleoplasm (IEA)

Molecular Function

protein binding (ISO)

References

Genomics

Comparative Map Data

MRFAP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	27	42,763,097 - 42,765,216 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	27	42,763,302 - 42,764,461 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	89,570,229 - 89,572,398 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

MRFAP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	6,640,685 - 6,642,729 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	6,640,091 - 6,642,729 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	6,642,412 - 6,644,456 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	6,693,346 - 6,695,350 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	4	6,544,106 - 6,546,110 (+)	NCBI		Celera
Cytogenetic Map	4	p16.1	NCBI
HuRef	4	6,573,357 - 6,576,011 (+)	NCBI		HuRef
CHM1_1	4	6,640,191 - 6,642,845 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	4	6,617,045 - 6,619,089 (+)	NCBI		T2T-CHM13v2.0

Mrfap1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	36,952,211 - 36,954,098 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	36,952,211 - 36,954,116 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	36,794,867 - 36,796,754 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	36,794,867 - 36,796,772 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	37,186,106 - 37,187,993 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	37,083,116 - 37,084,953 (-)	NCBI		MGSCv36	mm8
Celera	5	34,246,147 - 34,248,034 (-)	NCBI		Celera
Cytogenetic Map	5	B3	NCBI
cM Map	5	19.26	NCBI

Mrfap1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	78,227,225 - 78,229,002 (+)	NCBI		GRCr8
mRatBN7.2	14	74,002,512 - 74,004,289 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	73,969,003 - 74,004,281 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	78,444,817 - 78,446,594 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	79,685,661 - 79,687,438 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	76,130,632 - 76,132,409 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	78,973,384 - 78,975,161 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	78,973,364 - 78,975,166 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	87,168,542 - 87,170,319 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	79,587,301 - 79,589,078 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	14	79,589,680 - 79,590,816 (+)	NCBI
Celera	14	72,948,036 - 72,949,813 (+)	NCBI		Celera
Cytogenetic Map	14	q21	NCBI

MRFAP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	6,909,739 - 6,912,017 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	6,838,786 - 6,840,951 (+)	NCBI		NHGRI_mPanPan1
PanPan1.1	4	6,712,071 - 6,714,712 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

MRFAP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	58,760,074 - 58,762,225 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	58,760,362 - 58,760,745 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	61,407,852 - 61,409,958 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	59,226,956 - 59,229,741 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	59,226,975 - 59,230,378 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	58,729,674 - 58,731,818 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	58,931,646 - 58,933,794 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	59,280,515 - 59,282,621 (+)	NCBI		UU_Cfam_GSD_1.0

LOC100621287
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	4,120,796 - 4,122,908 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	4,120,784 - 4,123,079 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	3,117,228 - 3,119,410 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium	36	20	60
Low
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008017972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008017973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000014191 ⟹ ENSCSAP00000012170

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	27	42,763,302 - 42,764,461 (+)	Ensembl

RefSeq Acc Id:

XM_008017972 ⟹ XP_008016163

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	27	42,763,171 - 42,765,216 (+)	NCBI
Vero_WHO_p1.0	NW_023666047	89,570,351 - 89,572,398 (+)	NCBI

Sequence:

show sequence

TTCGCCGTTACTCTACGCGTAAGTTGCTTCTCCGTGGCTTCTCCGAGGAGAAAAGTTGAAAAAG
GGTAAAAGTTTTCAGGAATATTCGGGCTCTCTGTTGCTAAGCATAGCGAGTGTCGGTTTTCTCT
CTCCAACAGACATCGCTACTGCGGTTCCGAGGCAGTGGGAAGAGATGCGGCCCCTGGACATCGT
CGAGCTGGCGGAACCGGAGGAAGTGGAGGTGCTGGAGCCCGAGGAGGATTTCGAGCAGTTTCTG
CTCCCGGTCATCAACGAGATGCGCGAGGACATCGCGTCGCTGACGCGCGAGCACGGGCGGGCGT
ACCTGCGGAACCGGAGCAAGCTGTGGGAGATGGACAATATGCTCATCCAGATCAAAACGCAGGT
GGAGGCCTCGGAGGAGAGCGCGCTCAACCACCTCCAGAACCCGGGCGACGCGGCCGAGGGCCGG
GCGGCCAAGAGGTGCGAGAAGGCCGAGGAGAAGGCCAAGGAGATCGCGAAGATGGCAGAGATGC
TGGTGGAGCTGGTCCGGCGGATAGAGAAGAGCGAGTCGTCGTGAGCGCGGTCGGCGGTTTACAG
CCAATGGATTCTGGTCAACTGGTGGAGATTGGCTGACACCCTGGAGAAACCGAAACCAGAGAGC
CTTTTGTTTTCTCTTTTTTCCTCTGTCTATTGCTCTGTCTCACTTAACACTACGTTTTCTGCTA
TGGTCTGCGGTTGATGACCTCAATATGAGTTTCGATTGTTACGTGTTTTTGTTTGGAACGTGAT
TTTGTTTGAAAATGCTCTCACATACAGGAATTAGGGCCTAGATTGTAAGCTCTTGCAGCAGTCA
TATTTGTTCCCGGGCTTTGGTGGTTATTTCTAAATTTTTGAGGTGCTTTGCTCTTTCTTGTGTG
ACCTGATAGCTCCCTGGAACTTTGGGTCTGTGTGTGACACATGAGACTCACAGTTGGAGTTCTC
CAGCTCTGGAGGTGCTGAAGGAGCTGCATTAATTCTGGAAGACGACTCCATGCAGCAACTACTG
AAGAAAGGACCAGACTTCAACGGGGAGTGCGGATGGGCCGACCTGGCTGGGACTCGTGAATCTG
GAGAAGAGCTGGAGAATGGATAATATTGTCTGTGTTTGGAGACTTAATTTCTGTGTGAGACCAA
AGGAGGAGAAATGTATTTTGTTCAAAGTTTAAATTTTATGTGGTACACTATCTTACCTAACCTG
TACGGTGAGTTTGTTTGGACAACCTAACTCAGCTTTACTTGACATGGAACCTGAAATAGAAGAT
AAGATCTTGATATTCTGTACAAGGTGATGTAATACCCTGATGCGTTTTAGGGGACTTGGCATAG
AATGAAAGATTTGCAGAGGCCCTTGAGGGGCTCGGGGATGAGAGTATGGAATTGTCTGCAGTGG
ACCCTAAACTGGACTGGAAGAGGCATCCTCAAGGTTCATACGTTGTCCAGCTATAAGTTCATTT
GAGTAGCAGACCTAACAAATATTTGAGGTCAAAACCCTACCGTGTTAAAAACAAACAAAAAAAA
CTTACCATGTTAATAAAAGTATTCATTTGCTTGAAAAGAC

hide sequence

RefSeq Acc Id:

XM_008017973 ⟹ XP_008016164

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	27	42,763,097 - 42,765,216 (+)	NCBI
Vero_WHO_p1.0	NW_023666047	89,570,229 - 89,572,398 (+)	NCBI

Sequence:

show sequence

TAAAGAGGCCCGGCTGTGTCGTGAAAGGGGCCGCAACGCGCAGAGCGCTGGTTGACGGCTGAGA
CTCCATTTTGTTCGCCGTTACTCTACGCACATCGCTACTGCGGTTCCGAGGCAGTGGGAAGAGA
TGCGGCCCCTGGACATCGTCGAGCTGGCGGAACCGGAGGAAGTGGAGGTGCTGGAGCCCGAGGA
GGATTTCGAGCAGTTTCTGCTCCCGGTCATCAACGAGATGCGCGAGGACATCGCGTCGCTGACG
CGCGAGCACGGGCGGGCGTACCTGCGGAACCGGAGCAAGCTGTGGGAGATGGACAATATGCTCA
TCCAGATCAAAACGCAGGTGGAGGCCTCGGAGGAGAGCGCGCTCAACCACCTCCAGAACCCGGG
CGACGCGGCCGAGGGCCGGGCGGCCAAGAGGTGCGAGAAGGCCGAGGAGAAGGCCAAGGAGATC
GCGAAGATGGCAGAGATGCTGGTGGAGCTGGTCCGGCGGATAGAGAAGAGCGAGTCGTCGTGAG
CGCGGTCGGCGGTTTACAGCCAATGGATTCTGGTCAACTGGTGGAGATTGGCTGACACCCTGGA
GAAACCGAAACCAGAGAGCCTTTTGTTTTCTCTTTTTTCCTCTGTCTATTGCTCTGTCTCACTT
AACACTACGTTTTCTGCTATGGTCTGCGGTTGATGACCTCAATATGAGTTTCGATTGTTACGTG
TTTTTGTTTGGAACGTGATTTTGTTTGAAAATGCTCTCACATACAGGAATTAGGGCCTAGATTG
TAAGCTCTTGCAGCAGTCATATTTGTTCCCGGGCTTTGGTGGTTATTTCTAAATTTTTGAGGTG
CTTTGCTCTTTCTTGTGTGACCTGATAGCTCCCTGGAACTTTGGGTCTGTGTGTGACACATGAG
ACTCACAGTTGGAGTTCTCCAGCTCTGGAGGTGCTGAAGGAGCTGCATTAATTCTGGAAGACGA
CTCCATGCAGCAACTACTGAAGAAAGGACCAGACTTCAACGGGGAGTGCGGATGGGCCGACCTG
GCTGGGACTCGTGAATCTGGAGAAGAGCTGGAGAATGGATAATATTGTCTGTGTTTGGAGACTT
AATTTCTGTGTGAGACCAAAGGAGGAGAAATGTATTTTGTTCAAAGTTTAAATTTTATGTGGTA
CACTATCTTACCTAACCTGTACGGTGAGTTTGTTTGGACAACCTAACTCAGCTTTACTTGACAT
GGAACCTGAAATAGAAGATAAGATCTTGATATTCTGTACAAGGTGATGTAATACCCTGATGCGT
TTTAGGGGACTTGGCATAGAATGAAAGATTTGCAGAGGCCCTTGAGGGGCTCGGGGATGAGAGT
ATGGAATTGTCTGCAGTGGACCCTAAACTGGACTGGAAGAGGCATCCTCAAGGTTCATACGTTG
TCCAGCTATAAGTTCATTTGAGTAGCAGACCTAACAAATATTTGAGGTCAAAACCCTACCGTGT
TAAAAACAAACAAAAAAAACTTACCATGTTAATAAAAGTATTCATTTGCTTGAAAAGAC

hide sequence

Protein Sequences


Protein RefSeqs	XP_008016163	(Get FASTA)	NCBI Sequence Viewer
	XP_008016164	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000012170
	ENSCSAP00000012170.1

RefSeq Acc Id:	XP_008016164 ⟸ XM_008017973
- UniProtKB:	A0A0D9RU81 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_008016163 ⟸ XM_008017972
- UniProtKB:	A0A0D9RU81 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCSAP00000012170 ⟸ ENSCSAT00000014191

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000016101	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000014191.1	UniProtKB/TrEMBL
InterPro	MRFAP1	UniProtKB/TrEMBL
KEGG Report	csab:103246409	UniProtKB/TrEMBL
NCBI Gene	MRFAP1	ENTREZGENE
PANTHER	MORF4 FAMILY-ASSOCIATED PROTEIN 1	UniProtKB/TrEMBL
	PTHR31324	UniProtKB/TrEMBL
Pfam	MRFAP1	UniProtKB/TrEMBL
UniProt	A0A0D9RU81	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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