CKMT2 (creatine kinase, mitochondrial 2) - Rat Genome Database

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Gene: CKMT2 (creatine kinase, mitochondrial 2) Chlorocebus sabaeus
Analyze
Symbol: CKMT2
Name: creatine kinase, mitochondrial 2
RGD ID: 18628821
Description: ENCODES a protein that exhibits cardiolipin binding (ortholog); INVOLVED IN heart development (ortholog); skeletal muscle tissue development (ortholog); ASSOCIATED WITH genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN membrane (inferred); mitochondrial inner membrane (inferred); mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: creatine kinase S-type, mitochondrial
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1475,379,181 - 75,414,640 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl475,398,939 - 75,414,715 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604924,253,413 - 24,288,192 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
CKMT2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1475,379,181 - 75,414,640 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl475,398,939 - 75,414,715 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604924,253,413 - 24,288,192 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
CKMT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38581,233,322 - 81,266,398 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl581,233,320 - 81,266,398 (+)EnsemblGRCh38hg38GRCh38
GRCh37580,529,141 - 80,562,217 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36580,564,895 - 80,597,973 (+)NCBINCBI36Build 36hg18NCBI36
Build 34580,564,937 - 80,597,972NCBI
Celera576,433,409 - 76,466,487 (+)NCBICelera
Cytogenetic Map5q14.1NCBI
HuRef575,738,057 - 75,771,119 (+)NCBIHuRef
CHM1_1579,961,936 - 79,995,008 (+)NCBICHM1_1
T2T-CHM13v2.0581,717,903 - 81,750,979 (+)NCBIT2T-CHM13v2.0
Ckmt2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391392,001,510 - 92,025,001 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1392,001,506 - 92,025,004 (-)EnsemblGRCm39 Ensembl
GRCm381391,853,386 - 91,876,923 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1391,853,387 - 91,876,885 (-)EnsemblGRCm38mm10GRCm38
MGSCv371391,992,992 - 92,016,490 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361392,327,626 - 92,351,124 (-)NCBIMGSCv36mm8
Celera1395,480,623 - 95,504,103 (-)NCBICelera
Cytogenetic Map13C3NCBI
cM Map1347.43NCBI
Ckmt2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8224,815,008 - 24,845,511 (-)NCBIGRCr8
mRatBN7.2223,079,918 - 23,110,518 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl223,079,918 - 23,110,430 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx230,120,491 - 30,150,955 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0228,220,830 - 28,251,294 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0223,046,970 - 23,076,912 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0221,422,680 - 21,452,797 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl221,422,818 - 21,437,193 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0240,627,924 - 40,657,402 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4222,084,948 - 22,106,014 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1222,005,331 - 22,026,403 (-)NCBI
Celera219,182,609 - 19,209,711 (-)NCBICelera
Cytogenetic Map2q12NCBI
Ckmt2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541828,909,915 - 28,927,704 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541828,909,999 - 28,929,109 (-)NCBIChiLan1.0ChiLan1.0
CKMT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2434,028,977 - 34,068,639 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1532,189,632 - 32,222,132 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0534,013,387 - 34,046,522 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1534,324,529 - 34,357,963 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl534,324,529 - 34,356,919 (-)Ensemblpanpan1.1panPan2
CKMT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1326,011,261 - 26,042,646 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl326,011,263 - 26,026,991 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha327,247,362 - 27,263,081 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0325,925,683 - 25,957,453 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl325,925,685 - 25,957,366 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1325,877,524 - 25,893,259 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0325,847,135 - 25,862,863 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0326,126,835 - 26,142,587 (-)NCBIUU_Cfam_GSD_1.0
Ckmt2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213182,027,158 - 182,049,174 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936469575,785 - 598,612 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936469575,836 - 598,601 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CKMT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl289,796,474 - 89,832,990 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1289,796,470 - 89,830,293 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2291,754,202 - 91,770,538 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap2p16NCBI
Ckmt2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247431,791,423 - 1,812,970 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247431,791,040 - 1,812,970 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium
Low 36 18 60
Below cutoff 2

Sequence


Reference Sequences
RefSeq Acc Id: ENSCSAT00000013059   ⟹   ENSCSAP00000011070
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl475,398,939 - 75,414,715 (+)Ensembl
RefSeq Acc Id: XM_007977050   ⟹   XP_007975241
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1475,379,181 - 75,414,640 (+)NCBI
Vero_WHO_p1.0NW_02366604924,253,413 - 24,288,192 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007975241 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000011070.1
Reference Protein Sequences
RefSeq Acc Id: XP_007975241   ⟸   XM_007977050
- UniProtKB: A0A0D9RR31 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCSAP00000011070   ⟸   ENSCSAT00000013059


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000014966 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000013059.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.135.10 UniProtKB/TrEMBL
  Glutamine synthetase/guanido kinase, catalytic domain UniProtKB/TrEMBL
InterPro ATP-guanido_PTrfase UniProtKB/TrEMBL
  ATP-guanido_PTrfase_AS UniProtKB/TrEMBL
  ATP-guanido_PTrfase_cat UniProtKB/TrEMBL
  ATP-guanido_PTrfase_N UniProtKB/TrEMBL
  ATP-guanido_PTrfase_N_sf UniProtKB/TrEMBL
  Gln_synth/guanido_kin_cat_dom UniProtKB/TrEMBL
KEGG Report csab:103223947 UniProtKB/TrEMBL
NCBI Gene CKMT2 ENTREZGENE
PANTHER CREATINE KINASE S-TYPE, MITOCHONDRIAL UniProtKB/TrEMBL
  PTHR11547 UniProtKB/TrEMBL
Pfam ATP-gua_Ptrans UniProtKB/TrEMBL
  ATP-gua_PtransN UniProtKB/TrEMBL
PROSITE PHOSPHAGEN_KINASE UniProtKB/TrEMBL
  PHOSPHAGEN_KINASE_C UniProtKB/TrEMBL
  PHOSPHAGEN_KINASE_N UniProtKB/TrEMBL
Superfamily-SCOP SSF48034 UniProtKB/TrEMBL
  SSF55931 UniProtKB/TrEMBL
UniProt A0A0D9RR31 ENTREZGENE, UniProtKB/TrEMBL