ZNF475 (zinc finger protein 475) - Rat Genome Database

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Gene: ZNF475 (zinc finger protein 475) Chlorocebus sabaeus
Analyze
Symbol: ZNF475
Name: zinc finger protein 475
RGD ID: 18628602
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC103244413; zinc finger protein 474
RGD Orthologs
Human
Mouse
Rat
Bonobo
Squirrel
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12325,253,194 - 25,276,398 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603452,940,068 - 52,963,219 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
ZNF475
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12325,253,194 - 25,276,398 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603452,940,068 - 52,963,219 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ZNF475
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385122,160,176 - 122,182,658 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5122,129,622 - 122,183,949 (+)NCBIGRCh38hg38GRCh38
GRCh375121,495,871 - 121,518,353 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map5q23.2NCBI
HuRef5116,687,390 - 116,709,877 (+)NCBIHuRef
CHM1_15120,928,480 - 120,950,966 (+)NCBICHM1_1
T2T-CHM13v2.05122,646,426 - 122,699,514 (+)NCBIT2T-CHM13v2.0
1700034E13Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391852,779,292 - 52,796,803 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1852,779,281 - 52,796,805 (+)EnsemblGRCm39 Ensembl
GRCm381852,646,220 - 52,663,731 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1852,646,209 - 52,663,733 (+)EnsemblGRCm38mm10GRCm38
MGSCv371852,805,874 - 52,823,385 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361852,771,589 - 52,789,100 (+)NCBIMGSCv36mm8
Celera1853,963,206 - 53,980,666 (+)NCBICelera
Cytogenetic Map18D1NCBI
cM Map1828.25NCBI
Zfp475
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81848,276,106 - 48,297,562 (+)NCBIGRCr8
mRatBN7.21846,077,778 - 46,099,232 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1846,077,847 - 46,099,224 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1848,128,684 - 48,150,053 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01848,840,529 - 48,861,921 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01846,634,588 - 46,655,957 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01847,613,854 - 47,634,111 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1847,577,566 - 47,634,127 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01846,827,372 - 46,847,667 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41848,007,191 - 48,028,570 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1844,266,348 - 44,287,728 (+)NCBICelera
Cytogenetic Map18q11NCBI
ZNF475
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24117,404,763 - 117,459,120 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15115,558,426 - 115,611,491 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05117,543,357 - 117,569,906 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15123,330,045 - 123,352,475 (+)NCBIpanpan1.1PanPan1.1panPan2
Znf475
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213134,506,059 - 134,616,037 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365752,636,005 - 2,639,293 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
Znf475
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462477419,950,675 - 20,078,444 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_008014235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_008014235   ⟹   XP_008012426
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.12325,253,194 - 25,276,398 (+)NCBI
Vero_WHO_p1.0NW_02366603452,940,068 - 52,963,219 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008012426 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_008012426   ⟸   XM_008014235


Additional Information

Database Acc Id Source(s)
NCBI Gene LOC103244413 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-06-06 ZNF475  zinc finger protein 475  LOC103244413  zinc finger protein 474  Symbol and/or name change 5135510 APPROVED