ATP1B2 (ATPase Na+/K+ transporting subunit beta 2) - Rat Genome Database

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Gene: ATP1B2 (ATPase Na+/K+ transporting subunit beta 2) Chlorocebus sabaeus
Analyze
Symbol: ATP1B2
Name: ATPase Na+/K+ transporting subunit beta 2
RGD ID: 18622404
Description: ENCODES a protein that exhibits P-type sodium:potassium-exchanging transporter activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN lateral ventricle development (ortholog); motor behavior (ortholog); neuronal-glial interaction involved in hindbrain glial-mediated radial cell migration (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cerebellar ataxia (ortholog); common variable immunodeficiency (ortholog); FOUND IN apical plasma membrane (ortholog); cell periphery (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: sodium/potassium-transporting ATPase subunit beta-2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1167,030,016 - 7,035,620 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl167,030,055 - 7,037,754 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605914,373,302 - 14,379,044 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
acebutolol pharmacodynamics pathway   (ISO)
adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway  (ISO)
alfentanil pharmacodynamics pathway  (ISO)
amiloride pharmacodynamics pathway  (ISO)
amiodarone pharmacodynamics pathway  (ISO)
amlodipine pharmacodynamics pathway  (ISO)
atenolol pharmacodynamics pathway  (ISO)
bendroflumethiazide pharmacodynamics pathway  (ISO)
betaxolol pharmacodynamics pathway  (ISO)
bisoprolol pharmacodynamics pathway  (ISO)
bumetanide pharmacodynamics pathway  (ISO)
bupivacaine pharmacodynamics pathway  (ISO)
bupranolol drug pathway  (ISO)
bupranolol pharmacodynamics pathway  (ISO)
buprenorphine pharmacodynamics pathway  (ISO)
carvedilol pharmacodynamics pathway  (ISO)
chloroprocaine pharmacodynamics pathway  (ISO)
chlorothiazide pharmacodynamics pathway  (ISO)
chlorthalidone pharmacodynamics pathway  (ISO)
citalopram pharmacodynamics pathway  (ISO)
cocaine pharmacodynamics pathway  (ISO)
codeine and morphine pharmacodynamics pathway  (ISO)
cystinuria pathway  (ISO)
desipramine pharmacodynamics pathway  (ISO)
diltiazem pharmacodynamics pathway  (ISO)
diphenoxylate pharmacodynamics pathway  (ISO)
disopyramide pharmacodynamics pathway  (ISO)
dobutamine pharmacodynamics pathway  (ISO)
eplerenone pharmacodynamics pathway  (ISO)
escitalopram pharmacodynamics pathway  (ISO)
esmolol pharmacodynamics pathway  (ISO)
etacrynic acid pharmacodynamics pathway  (ISO)
ethylmorphine pharmacodynamics pathway  (ISO)
fentanyl pharmacodynamics pathway  (ISO)
flecainde pharmacodynamics pathway  (ISO)
fluoxetine pharmacodynamics pathway  (ISO)
fosphenytoin pharmacodynamics pathway  (ISO)
furosemide pharmacodynamics pathway  (ISO)
Hartnup disease pathway  (ISO)
heroin pharmacodynamics pathway  (ISO)
hydrochlorothiazide pharmacodynamics pathway  (ISO)
hydrocodone pharmacodynamics pathway  (ISO)
hydroflumethiazide pharmacodynamics pathway  (ISO)
hydromorphone pharmacodynamics pathway  (ISO)
ibutilide pharmacodynamics pathway  (ISO)
iminoglycinuria pathway  (ISO)
imipramine pharmacodynamics pathway  (ISO)
isoprenaline pharmacodynamics pathway  (ISO)
isradipine pharmacodynamics pathway  (ISO)
lactose degradation pathway  (ISO)
levacetylmethadol pharmacodynamics pathway  (ISO)
levobunolol pharmacodynamics pathway  (ISO)
levobupivacaine phgarmacodynamics pathway  (ISO)
levorphanol pharmacodynamics pathway  (ISO)
lidocaine pharmacodynamics pathway  (ISO)
lysinuric protein intolerance pathway  (ISO)
mepivacaine pharmacodynamics pathway  (ISO)
methadone pharmacodynamics pathway  (ISO)
metolazone pharmacodynamics pathway  (ISO)
metoprolol pharmacodynamics pathway  (ISO)
mexiletine pharmacodynamics pathway  (ISO)
nadolol pharmacodynamics pathway  (ISO)
nalbuphine pharmacodynamics pathway  (ISO)
naloxone pharmacodynamics pathway  (ISO)
naltrexone pharmacodynamics pathway  (ISO)
nebivolol pharmacodynamics pathway  (ISO)
nicotine pharmacodynamics pathway  (ISO)
nifedipine pharmacodynamics pathway  (ISO)
nimodipine pharmacodynamics pathway  (ISO)
nisoldipine pharmacodynamics pathway  (ISO)
nitrendipine pharmacodynamics pathway  (ISO)
oxybuprocaine pharmacodynamics pathway  (ISO)
oxycodone pharmacodynamics pathway  (ISO)
oxymorphone pharmacodynamics pathway  (ISO)
penbutolol pharmacodynamics pathway  (ISO)
pentazocine pharmacodynamics pathway  (ISO)
phenytoin pharmacodynamics pathway  (ISO)
pindolol pharmacodynamics pathway  (ISO)
prilocaine pharmacodynamics pathway  (ISO)
procainamide pharmacodynamics pathway  (ISO)
procaine pharmacodynamics pathway  (ISO)
propranolol pharmacodynamics pathway  (ISO)
quinidine pharmacodynamics pathway  (ISO)
remifentanil pharmacodynamics pathway  (ISO)
ropivacaine pharmacodynamics pathway  (ISO)
sotalol pharmacodynamics pathway  (ISO)
spironolactone pharmacodynamics pathway  (ISO)
timolol pharmacodynamics pathway  (ISO)
torasemide pharmacodynamics pathway  (ISO)
tramadol pharmacodynamics pathway  (ISO)
trehalose degradation pathway  (ISO)
triamterene pharmacodynamics pathway  (ISO)
trichlormethiazide pharmacodynamics pathway  (ISO)
verapamil pharmacodynamics pathway  (ISO)

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ATP1B2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1167,030,016 - 7,035,620 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl167,030,055 - 7,037,754 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605914,373,302 - 14,379,044 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ATP1B2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38177,646,627 - 7,657,770 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl177,646,627 - 7,657,770 (+)EnsemblGRCh38hg38GRCh38
GRCh37177,549,945 - 7,561,088 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36177,494,979 - 7,501,814 (+)NCBINCBI36Build 36hg18NCBI36
Build 34177,494,978 - 7,501,814NCBI
Celera177,580,634 - 7,587,472 (+)NCBICelera
Cytogenetic Map17p13.1NCBI
HuRef177,448,147 - 7,454,987 (+)NCBIHuRef
CHM1_1177,563,405 - 7,570,244 (+)NCBICHM1_1
T2T-CHM13v2.0177,550,794 - 7,561,928 (+)NCBIT2T-CHM13v2.0
Atp1b2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391169,490,554 - 69,496,786 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1169,490,562 - 69,496,768 (-)EnsemblGRCm39 Ensembl
GRCm381169,599,728 - 69,605,978 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1169,599,736 - 69,605,942 (-)EnsemblGRCm38mm10GRCm38
MGSCv371169,413,252 - 69,419,462 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361169,415,948 - 69,422,024 (-)NCBIMGSCv36mm8
Celera1176,563,216 - 76,569,425 (-)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1142.86NCBI
Atp1b2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81054,817,473 - 54,823,708 (-)NCBIGRCr8
mRatBN7.21054,318,698 - 54,324,933 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1054,318,701 - 54,324,933 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1058,981,123 - 58,987,375 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01058,469,668 - 58,475,921 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0PNS010001144.11,821 - 8,077 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01056,205,622 - 56,211,879 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1056,205,625 - 56,211,891 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01055,951,260 - 55,957,510 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41056,418,323 - 56,424,465 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11056,431,946 - 56,438,088 (-)NCBI
Celera1053,472,960 - 53,479,196 (-)NCBICelera
Cytogenetic Map10q24NCBI
Atp1b2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554679,261,775 - 9,268,743 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554679,261,775 - 9,268,743 (-)NCBIChiLan1.0ChiLan1.0
ATP1B2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21915,244,925 - 15,251,810 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11717,210,989 - 17,217,867 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0177,681,831 - 7,688,710 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1177,669,997 - 7,675,730 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl177,669,626 - 7,673,834 (+)Ensemblpanpan1.1panPan2
ATP1B2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1532,548,591 - 32,553,911 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl532,549,167 - 32,553,504 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha532,687,510 - 32,694,048 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0532,653,348 - 32,659,884 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl532,653,362 - 32,662,492 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1532,621,044 - 32,627,582 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0532,577,297 - 32,583,829 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0532,756,419 - 32,762,956 (+)NCBIUU_Cfam_GSD_1.0
Atp1b2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560247,433,820 - 47,440,238 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936595907,919 - 915,053 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936595908,019 - 914,426 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ATP1B2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1252,925,693 - 52,932,635 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11252,925,697 - 52,932,638 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21255,241,662 - 55,248,610 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Atp1b2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478610,234,492 - 10,262,367 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478610,254,979 - 10,261,508 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_008010189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCSAT00000009443   ⟹   ENSCSAP00000007558
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl167,030,055 - 7,037,754 (+)Ensembl
RefSeq Acc Id: XM_008010189   ⟹   XP_008008380
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1167,030,016 - 7,035,620 (+)NCBI
Vero_WHO_p1.0NW_02366605914,373,302 - 14,379,044 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008008380 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000007558
  ENSCSAP00000007558.1
RefSeq Acc Id: XP_008008380   ⟸   XM_008010189
- UniProtKB: A0A0D9RG19 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCSAP00000007558   ⟸   ENSCSAT00000009443


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000011352 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000009443.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.170 UniProtKB/TrEMBL
  2.60.40.1660 UniProtKB/TrEMBL
InterPro Na/K_ATPase_sub_beta UniProtKB/TrEMBL
  Na/K_ATPase_sub_beta_sf UniProtKB/TrEMBL
KEGG Report csab:103242319 UniProtKB/TrEMBL
NCBI Gene ATP1B2 ENTREZGENE
PANTHER PTHR11523 UniProtKB/TrEMBL
  SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA-2 UniProtKB/TrEMBL
Pfam Na_K-ATPase UniProtKB/TrEMBL
PROSITE ATPASE_NA_K_BETA_1 UniProtKB/TrEMBL
  ATPASE_NA_K_BETA_2 UniProtKB/TrEMBL
UniProt A0A0D9RG19 ENTREZGENE, UniProtKB/TrEMBL