CUNH2orf88 (chromosome unknown C2orf88 homolog)

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Gene: CUNH2orf88 (chromosome unknown C2orf88 homolog) Chlorocebus sabaeus

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Symbol:

CUNH2orf88 (Ensembl: C2orf88)

Name:

chromosome unknown C2orf88 homolog (Ensembl:chromosome 2 open reading frame 88)

RGD ID:

18620223

Description:

ENCODES a protein that exhibits protein kinase A regulatory subunit binding (inferred); ASSOCIATED WITH immunodeficiency 31B (ortholog); juvenile rheumatoid arthritis (ortholog); myostatin-related muscle hypertrophy (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

C10H2orf88; chromosome 10 open reading frame, human C2orf88; small membrane A-kinase anchor protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	75,573,749 - 75,710,761 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	75,707,093 - 75,707,380 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	123,758,782 - 123,778,605 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

immunodeficiency 31B (ISO)

juvenile rheumatoid arthritis (ISO)

Neurodevelopmental Disorders (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

membrane (IEA)

plasma membrane (IEA)

Molecular Function

protein binding (ISO)

protein kinase A regulatory subunit binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

CUNH2orf88
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	75,573,749 - 75,710,761 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	75,707,093 - 75,707,380 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	123,758,782 - 123,778,605 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

C2orf88
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	189,879,562 - 190,203,484 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	189,879,609 - 190,203,484 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	191,002,503 - 191,068,210 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	190,710,731 - 190,776,455 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	2	184,597,431 - 184,663,252 (+)	NCBI		Celera
Cytogenetic Map	2	q32.2	NCBI
HuRef	2	182,862,271 - 182,928,103 (+)	NCBI		HuRef
CHM1_1	2	191,008,368 - 191,074,067 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	190,627,278 - 190,693,074 (+)	NCBI		T2T-CHM13v2.0

1700019D03Rik
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	52,961,483 - 53,031,816 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	52,961,483 - 53,059,338 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	52,922,324 - 52,992,657 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	52,922,324 - 53,020,179 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	52,981,971 - 53,009,684 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	52,869,672 - 52,897,385 (-)	NCBI		MGSCv36	mm8
Celera	1	53,465,538 - 53,492,651 (-)	NCBI		Celera
Cytogenetic Map	1	C1.1	NCBI
cM Map	1	26.99	NCBI

C9h2orf88
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	56,037,234 - 56,076,793 (+)	NCBI		GRCr8
mRatBN7.2	9	48,539,140 - 48,584,882 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	48,568,409 - 48,584,831 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	57,086,832 - 57,126,474 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	62,209,667 - 62,249,303 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	60,505,647 - 60,545,289 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	53,395,684 - 53,464,930 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	53,440,272 - 53,440,595 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	53,068,168 - 53,131,324 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	45,558,745 - 45,559,487 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	9	46,208,942 - 46,278,615 (+)	NCBI		Celera
Cytogenetic Map	9	q22	NCBI

LOC102003714
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955403	8,797,416 - 8,847,431 (-)	NCBI	ChiLan1.0	ChiLan1.0

C13H2orf88
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	92,832,422 - 92,895,809 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	92,847,406 - 92,910,793 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	77,446,455 - 77,509,809 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	195,365,347 - 195,428,651 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	195,424,996 - 195,425,283 (+)	Ensembl	panpan1.1		panPan2

C37H2orf88
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	611,530 - 840,144 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	836,416 - 836,703 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	1,584,925 - 1,796,102 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	505,545 - 734,425 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	37	515,749 - 744,781 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	484,017 - 712,400 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	512,219 - 741,098 (+)	NCBI		UU_Cfam_GSD_1.0

CUNH2orf88
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	148,902,554 - 148,951,170 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936506	7,883,823 - 7,903,949 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

C15H2orf88
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	94,478,021 - 94,791,775 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	94,628,283 - 94,794,114 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	105,739,108 - 105,827,780 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CUNH2orf88
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624854	5,770,852 - 5,846,616 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007965635	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007965636	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007965637	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007965638	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007965639	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000018750 ⟹ ENSCSAP00000018186

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	10	75,707,093 - 75,707,380 (+)	Ensembl

RefSeq Acc Id:

XM_007965635 ⟹ XP_007963826

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	10	75,691,030 - 75,708,376 (+)	NCBI
Vero_WHO_p1.0	NW_023666040	123,758,782 - 123,778,605 (-)	NCBI

Sequence:

show sequence

TGTGTAAACACTACATGTGAAGAGTGGTGAAGGGGAACATTGAATACTGAAGTGGCCTGGAGAG
GGAAAGCACTGGTTAACATCACATGGACAAATTTCATTGTTTCCTAAAGATGGCCTGGAAGTAG
TCTGCCACTGCTTCCTCCACAAACAGCTCTTCATAACATGGGCTGCATGAAATCAAAGCAAACT
TTCCCATTTCCTACCATATATGAAGGTGAGAAGCAGCATGAGAGTGAAGAACCCTTTATGCCAG
AAGACAGATGTCTACCTAAGATGCCTTCTCCAGTTAATGTCAAAGAGGAAGTGAAGGAACCCCC
AGGGACCAATATTGTGATCTTGGAATATGCACACCGCCTGTCTCAGGATATCTTGTGTGATGCC
TTGCAGCAATGGGCATGCAATAATATCAAGTACCATGACATTCCATACATTGAGAGTGAGGGGC
CTTGAGGCTGTAGGATGACAACACTTTGACTGTGGAGGTGCTAGTTTGAATACATGTGACAAAA
GCAAAAACTGGTGTGAAAAAGTACAAATACCTATCTGGATTTAAAAATGTGTCTACGATAATGT
CACTAGTATAAGAACACCTAGGATGAAATGCATTTTAAGTACTTCTATGTTAACAGAAATTTCT
CTCTGTTTACTCTTAGATTTTAGTCATCTGAAGGGCTGAACAGAGGTCCTGTGATACCCAATAA
TCAACTGAATGTCATAGCACTTCTTCCTGAGTAATGGCATCACCAAAGAAAATGCTAAGGAATA
AAAACTGCCCCAAATTCCAATGGTTATTTTAAAGGTTGTCCTTTAAAATAACAATTTTTTTAAA
TTTATACCCAAAAAAGTCCAGATATGAAAAGGGCTTTTCTAAAATTGCTTGGCACGGGAATGGC
ACTCAAATCATAGTGATTAGCAGTAAGTCTTGTCTTGTTTGTCAAGGATCTCTACTTCTTGACA
CAAATGAACCCTGTCTTTAATAAGATATTTATTTTTGTAGATGAGAAGTGTAACTACCACCTTG
GACCTCAGGGCCCTAACTAATTACAGCTGTTATTGGACGACTCAGACTTTGCCGACTTTGTGCC
TAAAGCCATCTTAAAGATAACAGTTTATAGAAGCCATGACATTAGTGTTTATTGCATTGAATTA
AGAAGCCCAGTGATATAACTATACAAGAAAACAAGTATGGGTACCGTTTATAAAGAGCAATCCA
GTGAATCTTAAAAATAACAGAAACTTAGTCTGCAAGGTAGAAAGTTTCAGTTTTAATTGTGTAT
TAAGCTTTACTATCTCAGAGGTACAGAGAGCTGGAATATGGGCATTTATTCCCAGTTTTTTCTT
GACTAGTGAGGCGGTCGCCATTAAAATTACTGTGAGACCAGATAATGCATGAAGATTTACAGTT
GTATCGCAAAACGGAAAAGATAAAACTGTCCTTTGAGGAGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_007963826	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000018186
	ENSCSAP00000018186.1

RefSeq Acc Id:	XP_007963826 ⟸ XM_007965635
- UniProtKB:	A0A0D9SBE7 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000018186 ⟸ ENSCSAT00000018750

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000018660	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000018750.1	UniProtKB/TrEMBL
InterPro	Small_membr_AKAP	UniProtKB/TrEMBL
KEGG Report	csab:103217517	UniProtKB/TrEMBL
NCBI Gene	C10H2orf88	ENTREZGENE
PANTHER	PTHR36471	UniProtKB/TrEMBL
	SMALL MEMBRANE A-KINASE ANCHOR PROTEIN	UniProtKB/TrEMBL
Pfam	SmAKAP	UniProtKB/TrEMBL
UniProt	A0A0D9SBE7	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2020-12-08	CUNH2orf88	chromosome unknown C2orf88 homolog	C10H2orf88	chromosome 10 open reading frame, human C2orf88	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD